mRNA_H-paniculata_contig4772.11828.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig4772.11828.1
Unique NamemRNA_H-paniculata_contig4772.11828.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig4772.11828.1 vs. uniprot
Match: D7FVC4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVC4_ECTSI)

HSP 1 Score: 262 bits (669), Expect = 4.120e-72
Identity = 123/146 (84.25%), Postives = 136/146 (93.15%), Query Frame = 1
Query:  355 QAAAMADGLSDIVPMKVLRLFTAKQLEIAVAGKPEFDVAFWRKHTEYKGYRPEDATVEFFWKVIESMSTEDQSGFVRFAWGRSRLPPKSYWRVNMKLLRRNTSEDSLPVSHTCFFSIELPPYSSEERMREGLLTAIHFGMGGILNA 792
            QA AMA GLS+IVP+KVLRLFTA QLEIAVAG+PEFD+  W++HTEYKGYRP+D TV+FFWKVIESMS EDQSGFVRFAWGRSRLPPK +WRVNMKLLR N SE+SLPVSHTCFFSIELPPYS+EERMR+GLLTA+HFGMGGILNA
Sbjct: 6456 QAMAMAAGLSEIVPIKVLRLFTAAQLEIAVAGEPEFDIPCWKEHTEYKGYRPDDDTVQFFWKVIESMSPEDQSGFVRFAWGRSRLPPKPFWRVNMKLLRSNMSEESLPVSHTCFFSIELPPYSTEERMRKGLLTAVHFGMGGILNA 6601          
BLAST of mRNA_H-paniculata_contig4772.11828.1 vs. uniprot
Match: A0A836C961_9STRA (HECT domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C961_9STRA)

HSP 1 Score: 196 bits (498), Expect = 3.330e-53
Identity = 93/146 (63.70%), Postives = 111/146 (76.03%), Query Frame = 1
Query:  355 QAAAMADGLSDIVPMKVLRLFTAKQLEIAVAGKPEFDVAFWRKHTEYKGYRPEDATVEFFWKVIESMSTEDQSGFVRFAWGRSRLPPKSYWRVNMKLLRRNTSEDSLPVSHTCFFSIELPPYSSEERMREGLLTAIHFGMGGILNA 792
            Q AAMA GL DIVP+  LRLFT  QLE+AVAG P FD+  WR HTEYKG+  +  TV  FW+V+ S++ ++QSGFVRFAWGRSRLPP ++W  NMKL  R  +  +LPVSHTCFFS+ELP Y +E+ MR GLLTAIHFG  GILNA
Sbjct:  282 QIAAMARGLGDIVPLSALRLFTWDQLEVAVAGDPAFDLDLWRAHTEYKGFDADGETVALFWRVLGSLTPQEQSGFVRFAWGRSRLPPLAHWTTNMKLSNRGNA--ALPVSHTCFFSVELPDYKTEDEMRRGLLTAIHFGACGILNA 425          
BLAST of mRNA_H-paniculata_contig4772.11828.1 vs. uniprot
Match: A0A7S1G912_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G912_9STRA)

HSP 1 Score: 181 bits (460), Expect = 7.130e-49
Identity = 81/147 (55.10%), Postives = 111/147 (75.51%), Query Frame = 1
Query:  352 PQAAAMADGLSDIVPMKVLRLFTAKQLEIAVAGKPEFDVAFWRKHTEYKGYRPEDATVEFFWKVIESMSTEDQSGFVRFAWGRSRLPPKSYWRVNMKLLRRNTSEDSLPVSHTCFFSIELPPYSSEERMREGLLTAIHFGMGGILNA 792
            PQ AAM  G++ +VP + L+L T ++LE+AVAG+PE +VA  RKHTEY GY  +D  ++ FW+V+E  + E+++ ++RF WGRSRLP +  W   MK+ RR+ S++SLP SHTCFFSIELPPY S++ MR  LL A+HFG+GGILNA
Sbjct:  175 PQVAAMLRGIAAVVPARALKLMTWQELEVAVAGRPEINVALLRKHTEYDGYHRDDPVIQRFWRVMEEFTNEERTLYLRFVWGRSRLPIQRRWPKKMKITRRSASDESLPHSHTCFFSIELPPYGSDQVMRRRLLAAVHFGLGGILNA 321          
BLAST of mRNA_H-paniculata_contig4772.11828.1 vs. uniprot
Match: W7TSE1_9STRA (Hect e3 ubiquitin n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TSE1_9STRA)

HSP 1 Score: 184 bits (466), Expect = 1.120e-45
Identity = 86/136 (63.24%), Postives = 100/136 (73.53%), Query Frame = 1
Query:  355 QAAAMADGLSDIVPMKVLRLFTAKQLEIAVAGKPEFDVAFWRKHTEYKGYRPEDATVEFFWKVIESMSTEDQSGFVRFAWGRSRLPPKSYWRVNMKLLRRNTSEDSLPVSHTCFFSIELPPYSSEERMREGLLTAI 762
            Q  AMA GL  +V    L L T ++LE  V G P FD+AFW+ HT Y GY  +D T++ FWKV+ES S E+QSGFVRFAWGRSRLPPK+ W  NM++ RRN  EDSLP SHTCFFSIELPPY SE  MR+GLLTAI
Sbjct: 1453 QVGAMARGLYAVVARDTLLLLTWQELETLVCGSPTFDMAFWKAHTTYAGYSKDDLTIQLFWKVLESFSHEEQSGFVRFAWGRSRLPPKNAWYKNMQISRRNAGEDSLPASHTCFFSIELPPYQSEAAMRKGLLTAI 1588          
BLAST of mRNA_H-paniculata_contig4772.11828.1 vs. uniprot
Match: A0A7S3GZC0_9STRA (HECT-type E3 ubiquitin transferase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GZC0_9STRA)

HSP 1 Score: 159 bits (402), Expect = 9.660e-43
Identity = 77/143 (53.85%), Postives = 101/143 (70.63%), Query Frame = 1
Query:  361 AAMADGLSDIVPMKVLRLFTAKQLEIAVAGKPEFDVAFWRKHTEYKGYRPEDATVEFFWKVIESMSTEDQSGFVRFAWGRSRLPPKSYWRVNMKLLRRNTSEDSLPVSHTCFFSIELPPYSSEERMREGLLTAIHFGMGGILN 789
            AAMA G+ +++P + L LF++ QLE  V G P FD+  W+K T+  G    D TV  FWKV+E+++ ++ SGFVRFAWGRSRLP    +   M+L    T+  +LPVSHTCFFS+ELP Y +EE MR GLLTAIH+G+GGILN
Sbjct:    7 AAMARGMQEVIPSRALWLFSSSQLETLVCGNPVFDMDMWKKKTDSTGVS--DKTVALFWKVMETLTQKELSGFVRFAWGRSRLPAAKEFTTKMRLTNGGTA--TLPVSHTCFFSVELPEYPTEEAMRHGLLTAIHYGVGGILN 145          
BLAST of mRNA_H-paniculata_contig4772.11828.1 vs. uniprot
Match: A0A7S2D699_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D699_9STRA)

HSP 1 Score: 158 bits (399), Expect = 7.660e-41
Identity = 74/147 (50.34%), Postives = 107/147 (72.79%), Query Frame = 1
Query:  355 QAAAMADGLSDIVPMKVLRLFTAKQLEIAVAGKPEFDVAFWRKHTEYKGYRPEDATVEFFWKVIESMSTEDQSGFVRFAWGRSRLPPKSY-WRVNMKLLRRN-TSEDSLPVSHTCFFSIELPPYSSEERMREGLLTAIHFGMGGILN 789
            Q AAM  GL  +VP+++L+LFT +Q E  VAGKP+ D+   ++HTEY+G+RP D  + +FW+ +E ++ +++S F+RF WGRSRLP K   W    K+ R+    +++LPV+HTCFFSIELP YS+EE ++  LLTAI +G+GGILN
Sbjct:  113 QVAAMRRGLGCVVPLRLLQLFTWQQAEELVAGKPDVDLEDLKRHTEYRGFRPTDPAIVYFWRAMEGLNMDERSQFIRFVWGRSRLPLKGRPWPQTFKIQRQGGVGDETLPVTHTCFFSIELPDYSTEEILKTRLLTAITYGVGGILN 259          
BLAST of mRNA_H-paniculata_contig4772.11828.1 vs. uniprot
Match: A0A7S2SQP9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQP9_9STRA)

HSP 1 Score: 154 bits (389), Expect = 1.850e-40
Identity = 78/149 (52.35%), Postives = 107/149 (71.81%), Query Frame = 1
Query:  355 QAAAMADGLSDIVPMKVLRLFTAKQLEIAVAGKPEFDVAFWRKHTEYKGYRPEDATVEFFWKVIESMSTEDQSGFVRFAWGRSRLPPKSY-WRVNMKLLRRN--TSEDS-LPVSHTCFFSIELPPYSSEERMREGLLTAIHFGMGGILN 789
            Q AAM  GL+ +VP+++L+LFT +Q+E  VAGKPE D+   ++HTEY+G+ P    + FFWK +E++S  ++S F+RF WGRSRLP K   W    K+ R +  T+ D+ LP +HTCFFSIELP YSSEE   + LLTAI++G+GGILN
Sbjct:   28 QLAAMRRGLACVVPLRILQLFTWQQVEELVAGKPEVDLDDLKRHTEYRGFPPNAPAIRFFWKAMENLSHVERSQFIRFVWGRSRLPLKGRPWPQTFKIQRMDGVTNPDATLPETHTCFFSIELPAYSSEEICNQRLLTAINYGVGGILN 176          
BLAST of mRNA_H-paniculata_contig4772.11828.1 vs. uniprot
Match: A0A662WQB5_9STRA (HECT domain-containing protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WQB5_9STRA)

HSP 1 Score: 153 bits (386), Expect = 4.270e-40
Identity = 74/148 (50.00%), Postives = 98/148 (66.22%), Query Frame = 1
Query:  355 QAAAMADGLSDIVPMKVLRLFTAKQLEIAVAGKPEFDVAFWRKHTEYKGYRPEDATVEFFWKVIESMSTEDQSGFVRFAWGRSRLPPKSYWRVNMKLLRRNTSE--DSLPVSHTCFFSIELPPYSSEERMREGLLTAIHFGMGGILNA 792
            Q AAMA G + + P +VL L T ++LE+   G P+ D+A W++HT Y GY  +D TV  FW+V+   S E ++ FVRFAWGRSRLP +  W    KL ++   +   SLPV+HTCFFS+ELPPY++ E MR  LL  I FG+GGIL A
Sbjct:   26 QVAAMARGFATLFPRRVLTLLTWQELELLTCGSPKIDLALWQRHTRYDGYAEDDPTVRLFWEVLGDFSDEQRTDFVRFAWGRSRLP-RGKWPQPFKLSKKGGRDATHSLPVAHTCFFSVELPPYTTREIMRSRLLATITFGLGGILMA 172          
BLAST of mRNA_H-paniculata_contig4772.11828.1 vs. uniprot
Match: A0A6U4CS48_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4CS48_9STRA)

HSP 1 Score: 155 bits (393), Expect = 3.210e-37
Identity = 79/179 (44.13%), Postives = 108/179 (60.34%), Query Frame = 1
Query:  271 LFSRTLFH*PVLACALPLSLDLCCP*WPQAAAMADGLSDIVPMKVLRLFTAKQLEIAVAGKPEFDVAFWRKHTEYKGYRPEDATVEFFWKVIESMSTEDQSGFVRFAWGRSRLPPKSYWRVNMKLLRRNTS------EDSLPVSHTCFFSIELPPYSSEERMREGLLTAIHFGMGGILN 789
            LF+R L H  V +  LPL  ++           A G   ++P++ L L T  + E+ V G+  FD+A+WR HT Y GY   D  ++ FW V+ +   E +S FVRFAWGRSRLPP+  W  +M++ R N S      + SLP+SHTCFFS+ELPPY+S E MR GL   I +G+GG+LN
Sbjct:  424 LFARAL-HGAVFSEVLPLIDEV-----------ARGFDMVLPLRALALHTCAEAEVVVCGRASFDMAWWRTHTNYAGYEDTDEVIQNFWCVVNAWGDEQRSNFVRFAWGRSRLPPRESWYKDMQISRSNISGGAEAIDSSLPMSHTCFFSVELPPYTSIEAMRRGLNICITYGLGGVLN 590          
BLAST of mRNA_H-paniculata_contig4772.11828.1 vs. uniprot
Match: A0A418G151_9STRA (HECT domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418G151_9STRA)

HSP 1 Score: 154 bits (388), Expect = 1.230e-36
Identity = 74/148 (50.00%), Postives = 100/148 (67.57%), Query Frame = 1
Query:  355 QAAAMADGLSDIVPMKVLRLFTAKQLEIAVAGKPEFDVAFWRKHTEYKGYRPEDATVEFFWKVIESMSTEDQSGFVRFAWGRSRLPPKSYWRVNMKLLRRNTSED--SLPVSHTCFFSIELPPYSSEERMREGLLTAIHFGMGGILNA 792
            Q  AM  GLS + P++VL L   +++E+   G P+ D+A W++HT Y GY  +D TV  FW V+ S S E +S FVRFAWGRSRLP +  W    KL ++   +   SLPV+HTCFFS+ELPPY+++ERM + LL  I+FG+GGIL A
Sbjct:  427 QVTAMLRGLSTLFPVRVLTLLNWQEMEMLSCGTPKIDIALWKQHTRYDGYTDQDDTVRLFWDVMASFSDEQRSDFVRFAWGRSRLP-RGKWPQPFKLTKKAGRDSVLSLPVAHTCFFSVELPPYTTKERMHDMLLATINFGLGGILIA 573          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4772.11828.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVC4_ECTSI4.120e-7284.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836C961_9STRA3.330e-5363.70HECT domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7S1G912_9STRA7.130e-4955.10Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
W7TSE1_9STRA1.120e-4563.24Hect e3 ubiquitin n=1 Tax=Nannochloropsis gaditana... [more]
A0A7S3GZC0_9STRA9.660e-4353.85HECT-type E3 ubiquitin transferase n=1 Tax=Spumell... [more]
A0A7S2D699_9STRA7.660e-4150.34Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2SQP9_9STRA1.850e-4052.35Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A662WQB5_9STRA4.270e-4050.00HECT domain-containing protein (Fragment) n=2 Tax=... [more]
A0A6U4CS48_9STRA3.210e-3744.13Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A418G151_9STRA1.230e-3650.00HECT domain-containing protein n=1 Tax=Aphanomyces... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4772contigH-paniculata_contig4772:5928..8423 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score256.5
Seed ortholog evalue7.2e-66
Seed eggNOG ortholog2880.D7FVC4
Preferred nameHERC1
KEGG koko:K10594,ko:K12864
KEGG Pathwayko03040,ko04120,map03040,map04120
KEGG ModuleM00353
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005085,GO:0005086,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005794,GO:0005829,GO:0006109,GO:0006111,GO:0006508,GO:0006511,GO:0006807,GO:0006808,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010498,GO:0010675,GO:0010677,GO:0010906,GO:0012505,GO:0016020,GO:0019222,GO:0019538,GO:0019899,GO:0019941,GO:0030163,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032991,GO:0034657,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043255,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0045721,GO:0045912,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051020,GO:0051603,GO:0062012,GO:0062014,GO:0065007,GO:0065009,GO:0071704,GO:0080090,GO:0098772,GO:1901564,GO:1901565,GO:1901575
EggNOG free text desc.protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
EggNOG OGsCOG5184@1,KOG1426@2759,KOG1477@1,KOG1477@2759
EC2.3.2.26
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03041,ko04121
Exons4
Model size1695
Cds size429
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4772.11828.1prot_H-paniculata_contig4772.11828.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig4772 6828..8057 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930415.7688692-UTR-H-paniculata_contig4772:5927..68271622930415.7688692-UTR-H-paniculata_contig4772:5927..6827Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4772 5928..6827 -
1691481281.8378727-UTR-H-paniculata_contig4772:5927..68271691481281.8378727-UTR-H-paniculata_contig4772:5927..6827Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4772 5928..6827 -
1622930415.8564363-UTR-H-paniculata_contig4772:8057..84231622930415.8564363-UTR-H-paniculata_contig4772:8057..8423Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4772 8058..8423 -
1691481281.9066179-UTR-H-paniculata_contig4772:8057..84231691481281.9066179-UTR-H-paniculata_contig4772:8057..8423Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4772 8058..8423 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930415.7855122-CDS-H-paniculata_contig4772:6827..69441622930415.7855122-CDS-H-paniculata_contig4772:6827..6944Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4772 6828..6944 -
1691481281.8585644-CDS-H-paniculata_contig4772:6827..69441691481281.8585644-CDS-H-paniculata_contig4772:6827..6944Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4772 6828..6944 -
1622930415.810066-CDS-H-paniculata_contig4772:7192..73301622930415.810066-CDS-H-paniculata_contig4772:7192..7330Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4772 7193..7330 -
1691481281.8690615-CDS-H-paniculata_contig4772:7192..73301691481281.8690615-CDS-H-paniculata_contig4772:7192..7330Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4772 7193..7330 -
1622930415.8257382-CDS-H-paniculata_contig4772:7604..77421622930415.8257382-CDS-H-paniculata_contig4772:7604..7742Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4772 7605..7742 -
1691481281.8806124-CDS-H-paniculata_contig4772:7604..77421691481281.8806124-CDS-H-paniculata_contig4772:7604..7742Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4772 7605..7742 -
1622930415.8396034-CDS-H-paniculata_contig4772:8021..80571622930415.8396034-CDS-H-paniculata_contig4772:8021..8057Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4772 8022..8057 -
1691481281.890524-CDS-H-paniculata_contig4772:8021..80571691481281.890524-CDS-H-paniculata_contig4772:8021..8057Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4772 8022..8057 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig4772.11828.1

>prot_H-paniculata_contig4772.11828.1 ID=prot_H-paniculata_contig4772.11828.1|Name=mRNA_H-paniculata_contig4772.11828.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=143bp
MADGLSDIVPMKVLRLFTAKQLEIAVAGKPEFDVAFWRKHTEYKGYRPED
ATVEFFWKVIESMSTEDQSGFVRFAWGRSRLPPKSYWRVNMKLLRRNTSE
DSLPVSHTCFFSIELPPYSSEERMREGLLTAIHFGMGGILNA*
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mRNA from alignment at H-paniculata_contig4772:5928..8423-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig4772.11828.1 ID=mRNA_H-paniculata_contig4772.11828.1|Name=mRNA_H-paniculata_contig4772.11828.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2496bp|location=Sequence derived from alignment at H-paniculata_contig4772:5928..8423- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CCGCAACGATGCGTCCTGTCCCTGAAGAGTGCTATATACGACTACGTGAT GTCGACGTTGGGTTAGATTGTGTCTTCAAAAACAAGAACTCGTGGCTGGG AGAAATGTTGAGGCTTTTCCGTGAAGCCCTGTCAAGTGTATATTTGGTCT TGATGCATTGTAACTGCACCGGGATACGTATGTTGGATTTTATGCACCAG GAAGCACGCTTCCAGAGATAATGGCATGTGCAATGATCTTGTTATACATG CACATGCGTTTTAATGCACTCTTTTCTCACGCACTTTGTTCCATTGACCT GTTCTTGCATGTGCGCTGCCTCTCTCCCTCGATCTGTGCTGTCCTTGATG GCCTCAGGCGGCGGCGATGGCGGACGGCCTATCGGACATTGTGCCCATGA AGGTAACATGTCCTATTAAAATTGCGTCTTGCCGTCGAATGTGATTCGAA TCTAAAAAATTCGTGTGCAGTGGTGCAGTGGTGCAGTGATGCACTCGAAC GAAGCAGAATGTGAAATTCAAGACGAGAAGATTATAGGCACTTCGAAACA ACAACGTTATCCACAAAAGGCAACAGTATTGAACGCCGGGACACCATAGC CACTTTTTTTGCCACCCCCTCGCGATCTTGCATTTTCTAAAGTTTACCTC CCTTTGGCGCACTGTACTTATCACTTTGCAGGTATTACGCCTTTTCACGG CGAAGCAGTTGGAGATCGCTGTGGCGGGAAAGCCAGAGTTTGATGTCGCG TTCTGGAGGAAGCACACAGAATATAAGGGCTACCGACCAGAGGATGCTAC TGTAGAGTTCTTCTGGAAGGTAGCTACAGTAAATAGTGCTACAAATAATC CTAATATCATTTGCATTACAACTAATATGGTAGCTGGGTTCGGGTGTGAT CGCTCCAAAGCTCTAAAGATGCCTTGATTGACTTGCCCAAACTAGCTACA GAACGTCACTCGTAAAATCCATATCTACAGGACACCTCGAAAGCGCCGAC TGACCAGGAGTGACTTCGTCCATGTAACATGCGTACGTCACGAGATAATT CCATTCGGGTTCACTGATTATTATGTTAATTGGATTGTTGTAGGTGATCG AGTCCATGAGCACGGAAGATCAGAGCGGCTTCGTACGTTTCGCCTGGGGT CGGTCTCGTCTCCCTCCCAAGAGCTATTGGAGGGTCAACATGAAGCTGCT TCGGCGCAACACGAGCGAGGATAGCCTCCCGGTGGGTCAGGTCACCCGCT ATTCATGTTGTCTGTCCTGTGCACCATATCGAACAGGGCCGCTATTAATG CAACAACCTTCCTACGGTAGCAAGATGTCGGGATATGCATATTAATATTT CAATCCTACCAGGTGTTAGGGTCTCCTCAATAATGCCCTCCTCGTTTTTG TACATCTCAACCGATGGGTGGATAGATGTATTGATTTACTGTTTGATCGA TTCATTTGGTCATCCATTTATTCGCCCAGGTGAGCCACACGTGCTTCTTT TCCATTGAGCTTCCGCCCTACAGTAGTGAGGAACGTATGCGCGAAGGCCT TCTCACTGCCATTCACTTCGGCATGGGAGGAATCCTGAACGCATAAACAC TTGGACATCGAACAGCGACAACAGCAGAGCAAATTGGAGTAATAGGCTGC GCCCGGTCCTGTGGGCAGTATATATCTATCCAACATTCACTGTGGGAGAG TGTGAATGCGGTCTGGCGAATGGGAAATACGGCACAACAACGCAACGTAG ATGTTAAGCATTGATGGAGCTGCGGGCGCTCCTTGGCTGCGTCTGACGGG ATTTTCACATGCACAAGTACAAGTACACGAGTAGTCAAGTCTATTTTAGT AGAGATTTTTTGTTTCAGTGGATGGGCGACGACCCGCGCTCACACAATAT ACATGTGGATGACAACAGAAAACTTGACGCTATATGCGCTATACCTTGTG CAGGTGCAGTTTTTACAGTTTTATCGTATGTGGGGGCACCTAGGTAGGTA GGGGCGTGATATTTCTGTATTGTAACCTGTGTGCGTTGAGATAGCATGCA CCAGTGCCGGTGACTTCCCGATGGCGGAGGGTTCGTTACGTTACCTAGAA ATGTGTGTGTTTTAATCATCGTCCCAGAGAAAATAACAATATCCTGACGT AAGGCCCAGCGCACACACACGGCGACTTAGGCAGCTTGAACTCTCCTCCG GTACATAGTGGCAAAACGATGACTTTAGAGGGCTGAAAATTTACAGCGCC GGATTACCGTTCCCCGTAGATTGATTCAGAACCGCGTATTATTAATATGA TGGATGACTGGTCCCACTTTCCCGATCGAAACCTGCCGGACTGCGTCGGT ACCATGCACAGGGTTTGATTCGCGTAGAGATATATATTTTTTTGGGGGGG TTGCTCCACACTAGCCTGGTGTACTGTGCAGTATTGCAGCACTATGTAAT TAACAAATCATGGATATCAACATTGTCACTACGAATAACTGGCCGG
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Coding sequence (CDS) from alignment at H-paniculata_contig4772:5928..8423-

>mRNA_H-paniculata_contig4772.11828.1 ID=mRNA_H-paniculata_contig4772.11828.1|Name=mRNA_H-paniculata_contig4772.11828.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=858bp|location=Sequence derived from alignment at H-paniculata_contig4772:5928..8423- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCGGACGGCCTATCGGACATTGTGCCCATGAAGATGGCGGACGGCCT
ATCGGACATTGTGCCCATGAAGGTATTACGCCTTTTCACGGCGAAGCAGT
TGGAGATCGCTGTGGCGGGAAAGCCAGAGTTTGATGTCGCGTTCTGGAGG
AAGCACACAGAATATAAGGGCTACCGACCAGAGGATGCTACTGTAGAGTT
CTTCTGGAAGGTATTACGCCTTTTCACGGCGAAGCAGTTGGAGATCGCTG
TGGCGGGAAAGCCAGAGTTTGATGTCGCGTTCTGGAGGAAGCACACAGAA
TATAAGGGCTACCGACCAGAGGATGCTACTGTAGAGTTCTTCTGGAAGGT
GATCGAGTCCATGAGCACGGAAGATCAGAGCGGCTTCGTACGTTTCGCCT
GGGGTCGGTCTCGTCTCCCTCCCAAGAGCTATTGGAGGGTCAACATGAAG
CTGCTTCGGCGCAACACGAGCGAGGATAGCCTCCCGGTGATCGAGTCCAT
GAGCACGGAAGATCAGAGCGGCTTCGTACGTTTCGCCTGGGGTCGGTCTC
GTCTCCCTCCCAAGAGCTATTGGAGGGTCAACATGAAGCTGCTTCGGCGC
AACACGAGCGAGGATAGCCTCCCGGTGAGCCACACGTGCTTCTTTTCCAT
TGAGCTTCCGCCCTACAGTAGTGAGGAACGTATGCGCGAAGGCCTTCTCA
CTGCCATTCACTTCGGCATGGGAGGAATCCTGAACGCATAAGTGAGCCAC
ACGTGCTTCTTTTCCATTGAGCTTCCGCCCTACAGTAGTGAGGAACGTAT
GCGCGAAGGCCTTCTCACTGCCATTCACTTCGGCATGGGAGGAATCCTGA
ACGCATAA
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