prot_H-paniculata_contig11840.1182.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig11840.1182.1
Unique Nameprot_H-paniculata_contig11840.1182.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length410
Homology
BLAST of mRNA_H-paniculata_contig11840.1182.1 vs. uniprot
Match: D7FMW8_ECTSI (Inositol triphosphate receptor (IP3R)/ Ryanodine receptor like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMW8_ECTSI)

HSP 1 Score: 206 bits (525), Expect = 5.700e-55
Identity = 166/418 (39.71%), Postives = 215/418 (51.44%), Query Frame = 0
Query:    3 GVFGRSFQASIHAIEGEGDGTGDESQMGNFRLLSSLADGSAVRVTDIQISVMRVLTLMLAHDMDGQIDEVLKLAEAFDFDEDAFRFRTSLG-EKPTATFNGEDIWGVVHN-GGSGLLAGASGK---GTMQNLAQTLLKLAAAGRDRGVAGSAKLTSRSFALLFRISDQGNQLAREACKVTLLNGRAAAETHRRLARGVAALKAFARRRRG-----GATTGQISSR---AGGVPSAQPTPLLVRVVDDNDKSVGSAATEKGGSFSLVESAVS----NVGTGGGGPDERGHQRSMAMRRTVGESGGLSKVAAAQAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAWLTSEEAEAEQDNVMEALEEIRAVLEADRDEQDARTGAGCGGAEVERVARGLGLAPTLLGGLRALKQE 403
            G+FG + +       G G G    S     +LL SLAD  AV +TD ++SVMRVLTL+L H++D Q+D+VL LA  +D +E+AFRF      +K  AT+ G+DIW +VHN GG+GLLAG  G+     + NL+ TLL+LA AG++ G AG   LT+RSFALLFRISDQGNQLAREA KVT L GRAA+ETHR L R V AL+AF+RRR G       T G  + R    GG                          E G    +  +A +    + GTG   PDE G   + A   +   S    ++A A +A                                           +AE+ +V EAL E+R VL A R++ D         AEVERVA G+GL   LLG LRAL++E
Sbjct: 1790 GMFGGTSRRESSVGGGVGSGAKISSAS---KLLGSLADEDAVGITDTEVSVMRVLTLLLGHELDKQLDKVLWLARKYDKNENAFRFSFDASTDKMVATYKGKDIWSLVHNSGGAGLLAGREGEINAHNLSNLSGTLLRLAVAGQESGRAGGPTLTARSFALLFRISDQGNQLAREARKVTQLTGRAASETHRGLNRAVMALRAFSRRRAGRPAMLADTVGNSNGRNVLVGGSSERLXXXXXXXXXXXTKPLPRKGTGESGAPVKVTRTAAARGEEDGGTGASPPDEAGADVARARSLSAIFSAAPPRLAPAPSAQDAPAAPVSAAPTGLGTDLISAL--------------------QAEEKSVSEALGEVRRVLMAGREDADGAQ------AEVERVAAGVGLPAALLGALRALRRE 2178          
BLAST of mRNA_H-paniculata_contig11840.1182.1 vs. uniprot
Match: A0A6H5KQK2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQK2_9PHAE)

HSP 1 Score: 171 bits (433), Expect = 7.740e-43
Identity = 101/173 (58.38%), Postives = 127/173 (73.41%), Query Frame = 0
Query:   40 DGSAVRVTDIQISVMRVLTLMLAHDMDGQIDEVLKLAEAFDFDEDAFRFRTSLG-EKPTATFNGEDIWGVVHN-GGSGLLAGASGK---GTMQNLAQTLLKLAAAGRDRGVAGSAKLTSRSFALLFRISDQGNQLAREACKVTLLNGRAAAETHRRLARGVAALKAFARRRRG 207
            D  AV +TD ++SVMRVLTL+L H++D Q+D+VL LA  +D +E+AFRF       K  AT+ G+DIW +V N GG+GL+AG  G+     + NL+ TLL+LA AG++ G AG   LT+RSFALLFRISDQGNQLAREA KVT L GRAA+ETHR L R V AL+AF+RRR G
Sbjct:  976 DEDAVGITDTEVSVMRVLTLLLGHELDKQLDKVLWLARKYDENENAFRFSFDASTNKMVATYKGKDIWSLVRNSGGAGLVAGKEGEMNTHNLPNLSGTLLRLAVAGQESGRAGGPTLTARSFALLFRISDQGNQLAREARKVTQLTGRAASETHRGLTRAVMALRAFSRRRAG 1148          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11840.1182.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FMW8_ECTSI5.700e-5539.71Inositol triphosphate receptor (IP3R)/ Ryanodine r... [more]
A0A6H5KQK2_9PHAE7.740e-4358.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 339..370

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig11840contigH-paniculata_contig11840:1444..6005 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig11840.1182.1mRNA_H-paniculata_contig11840.1182.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig11840 1444..6006 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig11840.1182.1 ID=prot_H-paniculata_contig11840.1182.1|Name=mRNA_H-paniculata_contig11840.1182.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=410bp
RDGVFGRSFQASIHAIEGEGDGTGDESQMGNFRLLSSLADGSAVRVTDIQ
ISVMRVLTLMLAHDMDGQIDEVLKLAEAFDFDEDAFRFRTSLGEKPTATF
NGEDIWGVVHNGGSGLLAGASGKGTMQNLAQTLLKLAAAGRDRGVAGSAK
LTSRSFALLFRISDQGNQLAREACKVTLLNGRAAAETHRRLARGVAALKA
FARRRRGGATTGQISSRAGGVPSAQPTPLLVRVVDDNDKSVGSAATEKGG
SFSLVESAVSNVGTGGGGPDERGHQRSMAMRRTVGESGGLSKVAAAQAAA
ASAIADATEAAAAASKAASAAAQAVQSAASAAVTAWLTSEEAEAEQDNVM
EALEEIRAVLEADRDEQDARTGAGCGGAEVERVARGLGLAPTLLGGLRAL
KQEGDNGGWG
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