mRNA_H-paniculata_contig4769.11823.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4769.11823.1 vs. uniprot
Match: D8LFN6_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFN6_ECTSI) HSP 1 Score: 373 bits (957), Expect = 2.130e-109 Identity = 280/772 (36.27%), Postives = 390/772 (50.52%), Query Frame = 3
Query: 501 DIDATPLEDCVEALRELAARCSLEGGALAKFGRRRRESDRINRLRNRIEALVPGMGLAAVVQVSEEEVRRMERVEQGGGGEVANKRRNFSKGQKLPAVPADAPKTKRWHIIRNVVTDGVYNHFIRDDGPWMVGLVGPGGSGKTTAAGMIVGENIGVVRPLRDESVSQALERLSRVRSLFSDGVVWLRVGKNG--AERLPGLMQYLAKMVYEQVVLGSGKGGHFSAPGKSPTDPKNGAAYVRETVAAATAGGGPKGEKGLRCLLVADDVWESEVVEELRKTGMRVLLTTRNPELVSNVGAEAILLDGGLQDAEAEALLICAAELPKGARLPDTAIAVAELCGYMPMYVESVARWETLRRRNDVAAWTEAVEAIQHHTVEVQKAMDAPGGGGNKVLSNKSAGVVERMAILRAGFECLGSQDSRSRWLYQALAVLPDGYAFGVHEAAVLLFDH--EHTGNDREL--AGHAVATLELWAIVAVQPGTGLYRMNGALSDFARRAIMHARGFVRRDTIARWRAYLSTLEVIRSVGVVDLVALWRAVERVGGEGWRASRSYDAPLAELDISDPLYFPSAKRVAELYGMEGDYDGAAGVMQKVWE-RHEVNPK------------ADPYASLAALFHCTWGALDRGHREEARHRKLRMALLLDGARERWKNQSSSTRRADAKDAAPISEQEAHFLYIVGLCCLLLRRVEEAEEWIQRALAARPNADLEGNHALVKSTRHELAKCVLGLGQVEEAEELFRQSLETTEATHGVCAMPVARTL 2759
+++ PLE CV A + ARCS G + + ++D + L +R+++L +GLA + + +++ ++ +A + AVP P WH+ R+ V D VY H P +VGLVG GSGKTT A IVGE+ G R ++E+ Q L RL+RVR F DGVVWLRVG+ G AER+P LM LAK V+E + K + APG SPT G+A++ + V + G K RCL+VADDVWE +++EELR TGM VL T+R+P+LV V + +D L AEAE LL AAEL G+ LP A V E C M +E V RW T++ +D W EAV AI M A G N S++ V+R+AILRAGF L +Q+ + LY +LAV+PDG AFG EAAV LFD E + R A VA LE WA+V + L+RM+ A SDFAR + + VR + RWR + S L+ IRS+ ++V LW A E +GGE WR SR Y L L S P PS K V E G+ + WE H+V + A+ +L +L HC AL+ +A R+L +L++D A E N +SS R AK +Q A + RR +EA E I AL + + + +T LA ++ L + E E++++ L E +G+ + + TL
Sbjct: 132 EMNVAPLESCVNAAEDFIARCSRRG-LCGRCTKASSDNDELLTLNSRVDSLTGDLGLAGIASLD----AKVDDLKAMLAEVIAQN--TMPASVPVAAVPNGKPVEHSWHVARDRVVDAVYEHLSCGQTPQVVGLVGRSGSGKTTCAASIVGESTG--RRHQNETGDQMLRRLNRVREHFRDGVVWLRVGRGGGSAERVPALMSQLAKTVFEDL-----KHSYGFAPGASPTG--GGSAFISDFVRGKGSAAGRK-----RCLVVADDVWEVDILEELRHTGMWVLFTSRDPDLVERVEGSVVPVDQ-LSKAEAECLLRGAAELSTGSSLPSAAAQVIERCDRMANRLEFVGRWSTVKGSDDEEDWAEAVSAIDAE-------MSAMAGEANAQKSDEDLSGVKRVAILRAGFLDLAAQNGFNPLLYLSLAVMPDGRAFGAKEAAVFLFDDWAEERASQRRTRQAAKVVANLEQWAVVTMHGN--LFRMHDAHSDFARNKLKRSED-VRASALRRWRGFTSRLDTIRSMDYFEMVDLWHATEMIGGESWRVSRPYHVALDSLRDSSPECIPSLKAVVEF-----------GINECAWEVTHDVALRLLRVQKDAAVEHAEVRHTLESLIHCA-NALNLNSDADAHRREL--SLMVDAAWENRSNTASSPPRLVAKRLLERGQQLA-----------ITRRPDEAHEAISEALRLQEERSGDFERLEISATLEFLAIVLVDLKRYNEGVEVYQRCLRIKEDLYGLEHLRLTVTL 846
BLAST of mRNA_H-paniculata_contig4769.11823.1 vs. uniprot
Match: A0A6H5KE50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE50_9PHAE) HSP 1 Score: 332 bits (850), Expect = 4.540e-93 Identity = 257/710 (36.20%), Postives = 365/710 (51.41%), Query Frame = 3
Query: 504 IDATPLEDCVEALRELAARCSLEGGALAKFGRRRRESDRINRLRNRIEALVPGMGLAAVVQVSEEEVRRMERVEQGGGGEVANKRRNFSKGQKLPAVPADAPKTKRWHIIRNVVTDGVYNHFIRDDGPWMVGLVGPGGSGKTTAAGMIVGENIGVVRPLRDESVSQA---LERLSRVRSLFSDGVVWLRVGKN--GAERLPGLMQYLAKMVYEQVVLGSGKGGHFSAPGKSPTDPKNGAAYVRETVAAATAGGGPKGEKGLRCLLVADDVWESEVVEELRKTGMRVLLTTRNPELVS-NVGAEAILLDGGLQDAEAEALLICAAELPKGARLPDTAIAVAE-LCGYMPMYVESVARWETLRRRNDVAAWTEAVEAIQHHTVEVQKAMDAPGGGGNKVLSNKSAGVVERMAILRAGFECLGSQDSR-SRWLYQALAVLPDGYAFGVHEAAVLLFDH---EHTGNDRELAGHAVATLELWAIVAVQPGTGLYRMNGALSDFARRAIMHARGFVRRDTIARWRAYLSTLEVIRSVGVVDLVALWRAVERVGGEGWRASRSYDAPLAELDISDPLYFPSAKRVAELYGMEGDYDGAAGVMQKVWERHEVNPKADPYASLAALFHCTWGALDRGHREEARHRKLRMALLLDGARERWKNQSSSTRRADAKDAAPISEQEAHFLYIVGLCCLLLRRVEEAEEWIQRALAARPNADL 2600
ID +PL+ CV+ L E+A R + G LA+ + RR+ D I RLR RIEA+VP MGLA VV + + R+E V Q R KL VP P + WH +R+ V D VY + D P + L G G+GK+TAA +V +R L DE+ QA ++RL RVR+ FSDGVV+LRVGK A+RLP LM+ LAK ++E V+ +P + G +YV++ + RCL+VADDVWE VV +L++TGM VLLTTR PE+V N G + L AEAE +L AAELP+G RL D A+ V + +CG++ M + V W +R +D AW EAV I V+V++ DA G ++V +R+ ILRAGF+ LG ++ ++ LY A+AV PDGYAFGV +AAVLL D + + ++A A+ LE WA++ + +G YRM+ DFAR I +G VR+ + RW + +S L+ V L +WRAVE VGG+GW R YD L + SD + VAELY E + ++V E + + AD + AL++ +G +E ++ L D ++ + A D Q + G+C E E W+++AL A+ N L
Sbjct: 168 IDVSPLQGCVDKLDEVAKRYH-DQGCLARLAQFRRDGDDIQRLRARIEAIVPIMGLAGVVNIMD----RLEDVRQ------ILARLQPRPRPKLAPVPPGLPAGEAWHAVRDHVEDEVYK-ILSGDEPAVAALTGKSGAGKSTAAADMVRNRKVDIRGLDDETEDQARTRMDRLERVRARFSDGVVYLRVGKGEGAADRLPDLMRKLAKALHEDVL---------KKTAGAPEAGEKGESYVKKMMTRTKK----------RCLVVADDVWEPPVVAKLKETGMWVLLTTRFPEIVEPNEGVDV----DQLTPAEAEDVLRGAAELPRGQRLCDPAMQVLDDICGFVAMDIAFVGSWSMVRHTDDSGAWAEAVSKINDTIVDVRE--DADGMNDSQV---------KRLGILRAGFDYLGEEEGTLAQKLYVAIAVFPDGYAFGVSDAAVLLNDTHPPDPAPHHMKVASRAIEILERWAVLTMN-ASGKYRMHDTHMDFARDKIRD-QGDVRKPVVRRWTSRISRLDFAVGRDVYALSDIWRAVEWVGGDGWFDLRPYDKELVSMG-SDCSKSHALDVVAELYEQEQKLAEMETLTREVLEHADDDAGADSCVRMVALWYLGRSLSIQGRLQEQGEASRQLGELFD-----------ASVKPSALDGGAAQAQLSSIYKAYGVCATAAGEWTEGESWLRKALHAQENGGL 817
BLAST of mRNA_H-paniculata_contig4769.11823.1 vs. uniprot
Match: A0A6H5KRK8_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KRK8_9PHAE) HSP 1 Score: 331 bits (848), Expect = 5.600e-93 Identity = 272/778 (34.96%), Postives = 391/778 (50.26%), Query Frame = 3
Query: 432 ITAYLIVRCNSQAAVTCCKPDAGDIDATPLEDCVEALRELAARCSLEGGALAKFGRRRRESDRINRLRNRIEALVPGMGLAAVVQVSEEEV--------------RRMERVEQGGGGEVANKRRNFSKG-----QKLPAVPADAPKTKRWHIIRNVVTDGVYNHFIRDDGPWMVGLVGPGGSGKTTAAGMIVGENIGVVRPLRDESVSQALERLSRVRSLFSDGVVWLRVGKNGAERLPGLMQYLAKMVYEQVVLGSGKGGHFSAPGKSPTDPKNGAAYVRETVAAATAGGGPKGEKGLRCLLVADDVWESEVVEELRKTGMRVLLTTRNPELVSNVGAEAILLDGGLQDAEAEALLICAAELPKGARLPDTAIAVAELCGYMPMYVESVARWETLRRRNDVAAWTEAVEAIQHHTVEVQKAMDAPGGGGNKVLSNKS--AGVVERMAILRAGFE--CLGSQDSRSRWLYQALAVLPDGYAFGVHEAAVLLFDHEHTGNDRELAGHAVATLELWAIVAVQPGTGLYRMNGALSDFARRAIMHARGFVRRDTIARWRAYLSTLEVIRSVGVVDLVALWRAVERVGGEGWRASRSYDAPLAELDISD-PLYFPSAKRVAELYGMEGDYDGAAGVMQKVWERHEVNPKAD-PYASLAALFHCTWGALD-RGHREEAR--HRKLRMALLLDGARERWKNQSSSTRRADAKDAAPISEQEAHFLYIVGLCCLLLRRVE--EAEEWIQRALAARPNADLEGNHALVKSTRHELAKCVLGLGQVE 2675
ITA IV+C ++D PLEDCV A+ + R + G +++ + + I +L+ R+ L + LA + +++ + RM + ++G E+ K + K+ VP P K WH+ R VT+ V+ D GP +VGLVG G+GKTTAA IV + VR FSDG+VWL V + + LP LM LA+MV+E + GG G+ P+ +G AYV++ V G KGL+CL+VAD+VWES+VV +L +TGM +LL+TR+ ELV E + +D L +AEAE++L AAEL ARLPD A + ELCG + M + V RW T+R R D AW++A +V+ MD GG SN S + V R AIL+AGFE +GS D R + LY +LAVLPDG+AF V +AAVLL+D E D G V LE W I+ T YRM+ A S+FAR ++M RG VRR I R +S+LE +RS+ L LW V+RVGG+GW +R Y+ L LD S+ PL+ + + VA + D+ GA +++ EV AD PY + +HC + + + EEA+ HRK AL L AR + K+ S D +A L + + L E EAE ++R+L + A+L+ + V +H+L C+ G+++
Sbjct: 74 ITACFIVKCRHGYT---------ELDVAPLEDCVNAVEKFVERYR-KRGKISRVLKAVGDKGDIVQLKERLRDLEGDLSLAGIASLAKYLIADPKPCSPVAFAFQERMGKKQEGNHEELLAKTETILRQLPKPPAKVANVPKGTPTHKSWHVERRNVTETVFQALDADGGPHLVGLVGDSGAGKTTAASAIVSSIV--------------------VRETFSDGIVWLPVNEGVHDNLPCLMLQLAQMVFEDI------GGSV---GRRPSGSDDGLAYVKQQVENGHGG------KGLKCLVVADNVWESDVVSQLLETGMWILLSTRDEELVKRANGEVVGVDE-LSEAEAESVLRRAAELSPEARLPDDAKDLIELCGRVAMDLAFVGRWSTVRGRQDRTAWSDAA-------CKVRAEMDK---GGVTAESNGSEDSRVNRRRAILQAGFEDLAIGSDDERVQRLYLSLAVLPDGHAFTVKDAAVLLYDREPGTEDEASVGGVVEALERWTIIRSVEAT--YRMHDAHSNFARESLMD-RGDVRRPAIKRLVRSISSLEALRSINRYTLKHLWAGVQRVGGDGWATTRPYEKALEALDESNSPLFRETIEAVAWFQEAQEDWTGANRTWRRLLAVEEVQLGADHPY--VLNTYHCLARCAEHQDNVEEAKEWHRKQHQALPLAMARAQSKHVGSEAAGLD----------DAGSLASLAATVITLHPGERGEAEMLLRRSLEIKM-AELDQDDVQVAVVQHDLGVCIREAGRLD 779
BLAST of mRNA_H-paniculata_contig4769.11823.1 vs. uniprot
Match: D7FZW8_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW8_ECTSI) HSP 1 Score: 324 bits (831), Expect = 6.300e-91 Identity = 256/746 (34.32%), Postives = 381/746 (51.07%), Query Frame = 3
Query: 483 CKPDAGDIDATPLEDCVEALRELAARCSLEGGALAKFGRRRRESDRINRLRNRIEALVPGMGLA--AVVQVSEEEVRR-MERVEQGGGGEVANKRRNFSKGQKLPAVPADAPKTKRWHIIRNVVTDGVYNHFIRDDGPWMVGLVGPGGSGKTTAAGMIVGENIGVVRPLRDESVSQALERLSRVRSLFSDGVVWLRVGKNGAERLPGLMQYLAKMVYEQVVLGSGKGGHFSAPGKSPTDPKNGAAYVRETVAAATAGGGPKGEKG--LRCLLVADDVWESEVVEELRKTGMRVLLTTRNPELVSNVGAEAILLDGGLQDAEAEALLICAAELPKGARLPDTAIAVAELCGYMPMYVESVARWETLRRRNDVAAWTEAVEAIQHHTVEVQKAMDAPGGGGNKVLSNKSAGVVERMAILRAGFE--CLGSQDSRSRWLYQALAVLPDGYAFGVHEAAVLLFDHEHTGNDRELAGHAVATLELWAIVAVQPGTGLYRMNGALSDFARRAIMHARGFVRRDTIARWRAYLSTLEVIRSVGVVDLVALWRAVERVGGEGWRASRSYDAPLAELDISDPLYFPSAKRVAELYGMEGDYDGAAGVMQKVWERHEVNPKADPYASLAALFHCTWGALDRGHREEAR--HRKLRMALLLDGARERWKNQSSSTRRADAKDAAPISEQEAHFLYIV----GLCCLLLRRVEEAEEWIQRALAARPNADLEGNHALVKSTRHELAKCVLGLGQVEEA 2681
C+ ++D PL+DCVEA + A RCS G +++ + + I L + ++ L +GLA AV++ +++++ ++R++Q + + R+F K L AVP AP K WH+ R V + D +V L G GSGKTT A IV R + VR FSDG+VWL V + +RLP LM LA+MV+E++ GG G+ P+ ++ A Y+++ + +G KG L+CL+VAD+VWE +VV +L +TGM VLL+TR+ +V +A+++D L A+AE++L AAELP+ +RLPD A+ + +LCG + M V V RW T+R R+D A+W++A I+ E++K P + + K R AIL+ GFE +GS D R + LY +LAV+PDG+AF + +AAVLL+D + D AG V LE W+I+ GT YRM+ A +DFAR ++ RG VRR + RW YLS+L+++RS L LW A+ER+GG+GW +R Y+ L + SD L +A+ V + D +GA+ +++ E + AD L + A G+ EEA H K L L A R S AD DA +S A L L LLRR + +E I L H V T +L G+++EA
Sbjct: 82 CRLIESEVDVAPLKDCVEAAKNFAERCSRRG-KVSRVIKAFSDKSEIAGLNSSVDRLTTDLGLAGIAVLEGKVDDMKKTLDRIDQ----RLESLPRSFGK---LAAVPMGAPVRKSWHVERRHAMATVLDALNGSDRACVVALAGYSGSGKTTVAAEIV--------------------RSTEVREAFSDGIVWLPVNEGAKKRLPSLMLQLARMVHEEI------GGSV---GRVPSASEDSATYIKQRL--------EEGHKGRRLKCLVVADNVWEEDVVSKLVETGMWVLLSTRDEAVVKRSRGKAVVVDE-LSQADAESVLKRAAELPRESRLPDDAVDLIKLCGRVAMDVAFVGRWSTVRGRHDPASWSDAASTIR---TEMEKVGHDPDNDSAENIPAK-----RRKAILQGGFEDLAIGSDDERVQRLYLSLAVMPDGHAFSLKDAAVLLYDRSPSTEDEASAGGVVDVLERWSIIRSAQGT--YRMHDAHTDFARECLLD-RGHVRRPALKRWTRYLSSLDILRSTDRYVLKGLWLAIERLGGDGWGKTRPYEKALGMMLESDALLRTTAEAVGWFQEAQEDLEGASASWRRLLEVEKRELGADHPFVLNTYGNLAIWAERLGNIEEAAKWHEKEVEGLPL--ALARMNALVRSGLEADLDDADSLSSVAATALEFRPGDRALAETLLRRSLDVKEAI-----------LGPEHLQVADTLRQLGVSAREAGRLDEA 757
BLAST of mRNA_H-paniculata_contig4769.11823.1 vs. uniprot
Match: D7FZY7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY7_ECTSI) HSP 1 Score: 316 bits (809), Expect = 7.980e-88 Identity = 227/628 (36.15%), Postives = 324/628 (51.59%), Query Frame = 3
Query: 501 DIDATPLEDCVEALRELAARCSLEGGALAKFGRRRRESDRINRLRNRIEALVPGMGLAAVVQVSEEEVRRMERVEQGGGGEVANKRRNFSKGQ-----------KLPAVPADAPKTKRWHIIRNVVTDGVYNHFIRDDGPWMVGLVGPGGSGKTTAAGMIVGENIGVVRPLRDESVSQALERLSRVRSLFSDGVVWLRVGKNGAERLPGLMQYLAKMVYEQVVLGSGKGGHFSAPGKSPTDPKNGAAYVRETVAAATAGGGPKGEKGLRCLLVADDVWESEVVEELRKTGMRVLLTTRNPELVSNVGAEAILLDGGLQDAEAEALLICAAELPKGARLPDTAIAVAELCGYMPMYVESVARWETLRRRNDVAAWTEAVEAIQHHTVEVQKAMDAPGGGGNKVLSNKSAGVVE-----RMAILRAGFECL--GSQDSRSRWLYQALAVLPDGYAFGVHEAAVLLFDHEHTGNDRELAGHAVATLELWAIVAVQPGT-------GLYRMNGALSDFARRAIMHARGFVRRDTIARWRAYLSTLEVIRSVGVVDLVALWRAVERVGGEGWRASRSYDAPLAELDISDPLYFPSAKRVAELYGMEGDYDGAAGVMQKVWERHEVNPKADPYA 2309
++D TP+E+C+EA EL RC G + + + + I R++ I L + LA V + + VE+ G + A + + + KL +P P K WH+ R V + V+ GP +VGLVG GSGKTTAA IV R + VR FSDGVVWL V +RLP LM LA M+ E+V G+ P +GAAY++E + G KGL+CL+VAD+VWE EVV +L +TGM VLL+TR+ ELV E + +D + + EAE++L A+ELP RLPD A+ + ELCG + M + V RW T+R R+D AW++A ++ +++ G +V S VVE R A+L+AGFE L GS D R + LY +LAVLPDG F V +AAVLL+D + + D A V LE W+++ G G Y ++ A SDFAR +M RG VRR + RW +S+L+ +RSV D+ LW VE+VGG+GW+++R Y+A LA ++ SDPL S VA+ E D++ A +++ + K PY+
Sbjct: 96 EMDLTPVEECLEAAGELVERCGGRG-KMTRVLNASSDKEEIARMKANIRDLEADLSLAGVAILEGKTSDLTAMVERMGTNQAATQEMILANTESIIDRLSKTPAKLAKIPKATPIRKSWHVERLYVMERVFEALTAVGGPHLVGLVGDSGSGKTTAASEIV--------------------RSNEVRQAFSDGVVWLTVNHGAKDRLPSLMLQLAHMMCEEV------------GGRRPATSDDGAAYIKEKMQRGHGG------KGLKCLVVADNVWEKEVVWKLLETGMWVLLSTRDEELVVGSEGEVVGVDE-MSEVEAESVLRKASELPPETRLPDDAVDLIELCGRVAMDLAFVGRWSTVRGRSDRTAWSDAAGKVRAEMGKIE---------GERV----SGTVVETRDARRKAVLQAGFEDLASGSDDERVQRLYLSLAVLPDGRGFTVKDAAVLLYDRKPSAEDEASAAGVVEILERWSVLRSIRGCYRMAWRGGHYVLHDAHSDFAREKLMD-RGDVRRPALVRWTRNISSLDTLRSVRWHDVRDLWLGVEQVGGDGWKSTRPYEAALAGMEDSDPLLPTSVVAVAKFQRHEEDWEEAIATCRRLLDMPVT--KVGPYS 667
BLAST of mRNA_H-paniculata_contig4769.11823.1 vs. uniprot
Match: A0A6H5KU40_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU40_9PHAE) HSP 1 Score: 311 bits (797), Expect = 1.420e-86 Identity = 271/813 (33.33%), Postives = 392/813 (48.22%), Query Frame = 3
Query: 429 IITAYLIVRCNSQAAVTCCKPDAGDIDATPLEDCVEALRELAARCSLEGGALAKFGRRRRESDRINRLRNRIEALVPGMGLAAVVQVSE---------EEVRRMERVEQGGGGEVANKR--------RNFSKG-----QKLPAVPAD---APKTKR-W----HIIRNVVTDGVYNHFIRDDGPWMVGLVGPGGSGKTTAAGMIVGENIGVVRPLRDESVSQALERLSRVRSLFSDGVVWLRVGKNGAE--RLPGLMQYLAKMVYEQVVLGSGKGGHFSAPGKSPTDPKNGAAYVRETVAAATAGGGPKGEKGLRCLLVADDVWESEVVEELRKTGMRVLLTTRNPELVSNVGAEAILLDGGLQDAEAEALLICAAELPKGARLPDTAIAVAELCGYMPMYVESVARWETLRRRNDVAAWTEAVEAIQHHTVEVQKAMDAPGGGGNKVLSNKSAGVVERMAILRAGFECLGSQDSRSRWLYQALAVLPDGYAFGVHEAAVLLFDHEHTGNDRELAGHAVATLELWAIVAVQPGTGLYRMNGALSDFARRAIMHARGF-----VRRDTIARWRAYLSTLEVIRSVGVVDLVALWRAVERVGGEGWRASRSYDAPLAELDISDPLYFPSAKRVAELYGMEGDYDGAAGVMQKVWER----HEVNPKADPYASLAALFHCTWGALDR----GHREEARHRKLRMALLLDGAR-ERWKNQSSSTRRADAKDAAPISEQEAHFLYIVGLCCLLLRRVEEAEEWIQRALAARPNADLEGNHALVKSTRHELAKCVLGLGQVEEAEELFRQSLETTEATHG 2729
+IT +++V+C+ +ID TPL +CV+ L L A S G +KF +S+ I +L RIE LV M LAA V VSE E++RR + + K +N +G Q+LPA A+ AP+ K W H+IR V V +F + PWMV LVG G+GKT+ A AL +R F DG+VW+R G+ A+ RL M LA V+E V G + T AAY++ + AG +GL+CL+VADDVWE EV++ LR++GM+ L+T+R+ EL G +A+++D ++ E +L AA+L G P+ A + +LC Y+ M + V R LR + D W A I+ E+ + PGG + ++K R I R G++ GS D R++ LY +L +LP+GYAF V +A++LLF G D E AG VA LE WA+V ++ G YRM+ A S+FAR+ + A G VR + RW A+LS L+ + S+ V L++LW+AV+ V + RSY A L +D SD +YF AK +A+LY EGD + Q + +R EV+PK +A TW D+ G E+ + RM L+D +RW Q D +DA +L+ GLC L R EE+E + +RAL A L + T H L + G+ EEA E+FR++L E G
Sbjct: 41 VITCFVVVKCDGGR---------NNIDVTPLSECVDDLEALVADYSRRG-LCSKFCNP--DSEVIEQLGKRIENLVHVMELAATVVVSEQVGGVNAAVEDLRRQLEINWARNECLLAKHETMLEECTKNIERGIKSVLQQLPAPQAERDQAPEPKGVWKPEDHVIRRHVVARVCEYFDSANSPWMVALVGRSGAGKTSTAS------------------EMALHY--HLRERFPDGIVWMRCGQGAADSARLARQMFILATWVHEDVENKLGISPSAAVAAAEGTA----AAYIKTRMEQGNAG------RGLKCLVVADDVWEPEVLDMLRQSGMKALITSRDYELTEASGGKAVVMDHVTEE-EGMLILQKAAKLRSGESPPNEARKILDLCNYVAMELNFVGRLSMLRSQVDGTQWLRAWNEIRS---EIGAEVSDPGGDFDDWAASK-----RRDVIFRVGYKDFGSGDVRNKILYLSLGILPNGYAFRVSDASLLLFG-ACQGRDMENAGDVVADLERWAVVRLESSDGTYRMHDAHSEFARKILTSALGLGFAADVRELAVRRWSAHLSCLKTVLSLDVGLLLSLWQAVDTVSCDVGIRVRSYRAQLCSIDSSDEVYFSFAKTIAQLYYAEGDDANVVDISQIMLDRSDMAREVHPKFVAFA--------TWRLWDKLPSHGGAEKEQELIRRMDALMDEENLQRWAPQVG-----DGEDA--------EWLHSCGLCLYRLDRREESETYFRRALQAWECLGLSAPQVQLSYTLHCLGRLAREAGRPEEAIEMFRRALVVKERAFG 780
BLAST of mRNA_H-paniculata_contig4769.11823.1 vs. uniprot
Match: A0A6H5KLK9_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLK9_9PHAE) HSP 1 Score: 302 bits (773), Expect = 5.450e-84 Identity = 224/634 (35.33%), Postives = 324/634 (51.10%), Query Frame = 3
Query: 483 CKPDAGDIDATPLEDCVEALRELAARCSLEGGALAKFGRRRRESDRINRLRNRIEALVPGMGLAAVVQVS---EEEVRRMERVEQ----GGGGEVANKRRNFSK----GQKLPAVPADAPKTKRWHIIRNVVTDGVYNHFIRDDGPWMVGLVGPGGSGKTTAAGMIVGENIGVVRPLRDESVSQALERLSRVRSLFSDGVVWLRVGKNGAERLPGLMQYLAKMVYEQVVLGSGKGGHFSAPGKSPTDPKNGAAYVRETVAAATAGGGPKGEKGLRCLLVADDVWESEVVEELRKTGMRVLLTTRNPELVSNVGAEAILLDGGLQDAEAEALLICAAELPKGARLPDTAIAVAELCGYMPMYVESVARWETLRRRNDVAAWTEAVEAIQHHTVEVQKAMDAPGGGGNKVLSNKSAGVVERMAILRAGFE--CLGSQDSRSRWLYQALAVLPDGYAFGVHEAAVLLFDHEHTGNDRELAGHAVATLELWAIVAVQPGTGLYRMNGALSDFARRAIMHARGFVRRDTIARWRAYLSTLEVIRSVG-VVDLVALWRAVERVGGEGWRASRSYDAPLAELDISDPLYFPSAKRVAELYGMEGDYDGAAGVMQKVWERHEVNPKAD-PYA--SLAALFHC 2333
C+ + + ATPL +CV A+ RCS G L++ + + + I L+ R+E L + LA + V E+ +E V+ +AN F++ + L VPA P K WH+ R V V + + GP +VGLVG GSGKTTAA IV R + VR FSDG+VWL V ERL LM +LA++V+E + GG G+ P +GAAY R+ + + G KGL+CL+VAD+VWE V+ +L +TGM VLL+TR+ LV + ++ L + +A ++L A+EL RLPD A+ + ELCG + M V V RW T+R R+D AW++A ++ +E + D V ++ V R A+L+AGFE +GS D R LY +LAVLPDG+AF +A LL+D D + TLE W+ A++ G YRM+ A S FAR +M RG+VR+ + RW LS+L+V+RS L LW AV R+GGE WR R Y A L+E+D S+PL S + + +GD+ A+ +++ AD P+ +L AL +C
Sbjct: 68 CRKGSSGLKATPLMECVNAVGAFVERCSRRG-MLSRVLKATDDKEEIAGLKQRLEDLEGDLRLAGIATVGGKVEDLKALLEHVDTKQALSHSQTLANHDIMFARVGISPETLATVPAGTPARKSWHVERRHVMRAVCDALPGEGGPRLVGLVGDSGSGKTTAAAEIV--------------------RSTEVREAFSDGIVWLSVNDGATERLRALMMHLARVVFEDI------GGSV---GRRPAGLDDGAAYTRQRMQSGHGG------KGLKCLVVADNVWEEAVISKLLETGMWVLLSTRDEALVRSAEGGVVVGVDELSEEDAMSVLRRASELSPELRLPDEAVELVELCGRVAMDVAFVGRWSTVRGRSDRTAWSDAAHKVRSK-IERSRVSD-------NVWDIRA---VRRKAVLQAGFEDLAIGSDDERIPRLYLSLAVLPDGHAFTAKDATALLYDRAPCPEDEVSTEELIRTLERWS--ALRTEGGAYRMHDAHSGFARDCVMD-RGYVRKPAVKRWTLRLSSLDVLRSFDDPFVLKGLWLAVGRLGGESWRNVRPYAAALSEMDESNPLLLKSLQSLGWFQDAQGDWQSASDTCRRILAVKRRQLGADHPHTILTLRALVYC 651
BLAST of mRNA_H-paniculata_contig4769.11823.1 vs. uniprot
Match: A0A6H5KYW3_9PHAE (NB-ARC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYW3_9PHAE) HSP 1 Score: 302 bits (773), Expect = 1.330e-83 Identity = 202/515 (39.22%), Postives = 274/515 (53.20%), Query Frame = 3
Query: 780 KLPAVPADAPKTKRWHIIRNVVTDGVYNHFIRDDGPWMVGLVGPGGSGKTTAAGMIVGENIGVVRPLRDESVSQALERLSRVRSLFSDGVVWLRVGKNGAERLPGLMQYLAKMVYEQVVLGSGKGGHFSAPGKSPTDPKNGAAYVRETVAAATAGGGPKGEKGLRCLLVADDVWESEVVEELRKTGMRVLLTTRNPELVSNVGAEAILLDGGLQDAEAEALLICAAELPKGARLPDTAIAVAELCGYMPMYVESVARWETLRRRNDVAAWTEAVEAIQHHTVEVQKAMDAPGGGGNKVLSNKSAGVVERMAILRAGFE--CLGSQDSRSRWLYQALAVLPDGYAFGVHEAAVLLFDHEHTGNDRELAGHAVATLELWAIVAVQPGTGLYRMNGALSDFARRAIMHARGFVRRDTIARWRAYLSTLEVIRSVGVVDLVALWRAVERVGGEGWRASRSYDAPLAELD-ISDPLYFPSAKRVAELYGMEGDYDGAAGVMQKVWERHEVNPKADPYASL 2315
KL VP P K W++ R V D V+ D GP +VGLVG GSGKTT A ESV R + V+ FSDG+ WL V ERL LM LA++VYE + + G+ PT + AAY+R+ + T G K L+CL+VAD+VWE EVV +L +TGM VLL+TRN LV+ E + +D L +A+A ++L AAELP ++P A+ + ELCG + M + V RW T+R R D AW++AV ++ +V G K+ + A R AILRAGFE +GS D R + LY +LAV PDG+AF V +AAVLL+D E D V TLE W ++ + G YRM+ A S FAR +M G+VRR + RW + +S LEV+RS L LW AVE VGG+GW SR+Y A L +D + L + +A L D++GA+ +++ E + AD Y L
Sbjct: 32 KLTKVPKGTPARKSWYVKRRHVMDTVFEGLASDGGPRLVGLVGGSGSGKTTVA---------------SESV-----RSTEVQEAFSDGIAWLSVNDGAKERLSSLMLQLARVVYEDIGC---------SVGRRPTSSDDCAAYIRQRMKKGTGG------KKLKCLVVADNVWEKEVVSKLLETGMWVLLSTRNITLVTEAHGEVVGVDE-LSEADAMSVLRRAAELPPQGKIPGDAVDLIELCGRVAMDLAFVGRWSTVRGRQDRMAWSDAVSKVREEMGKV-----GSGDASEKLAETRDA---RRKAILRAGFEDLAIGSDDERVQRLYLSLAVFPDGHAFTVRDAAVLLYDREPCAEDEASVAVVVDTLERWTVLRSEQGA--YRMHDAHSIFARETLMD-HGYVRRPAVKRWVSSISCLEVLRSSDPYVLKGLWLAVEGVGGDGWLKSRAYSAALVGMDRLHSALARQNIIALARLQEAHEDWEGASTTWRRLLEIEKKQLGADHYHVL 499
BLAST of mRNA_H-paniculata_contig4769.11823.1 vs. uniprot
Match: A0A6H5J759_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J759_9PHAE) HSP 1 Score: 286 bits (733), Expect = 4.990e-81 Identity = 189/497 (38.03%), Postives = 262/497 (52.72%), Query Frame = 3
Query: 792 VPADAPKTKRWHIIRNVVTDGVYNHFIRDDGPWMVGLVGPGGSGKTTAAGMIVGENIGVVRPLRDESVSQALERLSRVRSLFSDGVVWLRVGKNGAERLPGLMQYLAKMVYEQVVLGSGKGGHFSAPGKSPTDPKNGAAYVRETVAAATAGGGPKGEKGLRCLLVADDVWESEVVEELRKTGMRVLLTTRNPELVSNVGAEAILLDGGLQDAEAEALLICAAELPKGARLPDTAIAVAELCGYMPMYVESVARWETLRRRNDVAAWTEAVEAIQHHTVEVQKAMDAPGGGGNKVLSNKSAGVVERMAILRAGFE--CLGSQDSRSRWLYQALAVLPDGYAFGVHEAAVLLFDHEHTGNDRELAGHAVATLELWAIVAVQPGTGLYRMNGALSDFARRAIMHARGFVRRDTIARWRAYLSTLEVIRSVGVVDLVALWRAVERVGGEGWRASRSYDAPLAELDISDPLYFPSAKRVAELYGMEGDYDGAAGVMQKVWER 2276
VP P K WH+ R+V T+ V + GP +VGLVG G+GKTTAA +V N+ VR FSDG+VWL V +RLP LM LA+MV E + G GGH + G N AY+++ + G KGL+CL VAD+VWE EVV L KTGM VLL+TR+ ELV+ + LD L +AE++L AAELP RLPD A+ + +LCG + M + V RW T+R R+D AW++A ++ +++ G GN+ R AIL+AG E +GS D R + LY +LAVLPD VH+AA+LL+D + T D E + LE W+++ Y M+ S+FAR ++M RG VRR + RW Y+S+L+ +RS L W VE+VGGEGW + + LAE+D +PL S VA+ + D++ A+ +W R
Sbjct: 101 VPQGTPTRKSWHVERHV-TETVVEALTGEAGPRLVGLVGDSGAGKTTAAAELVRSNV--------------------VRESFSDGIVWLTVNYGANKRLPSLMLQLARMVQEDI--GGRVGGHPNESGG------NADAYIKQRMENGHGG------KGLKCLAVADNVWEKEVVSMLLKTGMTVLLSTRHEELVTGARGVPVRLDE-LSARDAESVLRSAAELPPAVRLPDDAVDLIDLCGRVAMDLAFVGRWSTVRGRHDRVAWSDAAAKVRAEIAKIEGDDIVDGARGNR-----------RKAILQAGLEDLAIGSDDERVQRLYLSLAVLPDDQGIQVHDAALLLYDRDPTAEDEESVARVLDVLERWSVLR-STWAYKYYMHDVQSEFARASLMD-RGDVRRHALRRWVGYISSLDTVRSYNADYLKHQWLDVEKVGGEGWDETHPCETALAEMDDPEPLLQESIAAVAKAHEAHEDWEKAS----TIWHR 544
BLAST of mRNA_H-paniculata_contig4769.11823.1 vs. uniprot
Match: A0A6H5JSI2_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI2_9PHAE) HSP 1 Score: 301 bits (772), Expect = 5.660e-81 Identity = 216/565 (38.23%), Postives = 306/565 (54.16%), Query Frame = 3
Query: 504 IDATPLEDCVEALRELAARCSLEGGALAKFGRRRRESDRINRLRNRIEALVPGMGLAAVVQVSEEEVRRMERVEQGGGGEVANKRRNFSKGQKLPAVPADAPKTKRWHIIRNVVTDGVYNHFIRDDGPWMVGLVGPGGSGKTTAAGMIVGENIGVVRPLRDESVSQALERLSRVRSLFSDGVVWLRVGKNG--AERLPGLMQYLAKMVYEQVVLGSGKGGHFSAPGKSPTDPKNGAAYVRETVAAATAGGGPKGEKGLRCLLVADDVWESEVVEELRKTGMRVLLTTRNPELVSNVGAEAILLDGGLQDAEAEALLICAAELPKGARLPDTAIAVAELCGYMPMYVESVARWETLRRRNDVA----AWTEAVEAIQHHTVEVQKAMDAPGGGGNKVLSNKSAGVVERMAILRAGFECLGSQDSRSRWLYQALAVLPDGYAFGVHEAAVLLFDHEHTGNDRELAGHAVATLELWAIVAVQPGTGLYRMNGALSDFARRAIMHARGFVRRDTIARWRAYLSTLEVIRSVGVVDLVALWRAVERVGGEGWRASRSYDAPLAELDISDP 2180
ID PL++CV+ L+E+A R + G LA+ + RR+ + I RLR RIE +VP MGL+ VV E+ + + R++ G KL VP AP TK +H++R+ V D V D GP M L G G+GKTT+A +VGE R RVR+LF DGVVWL VG+ A+RLP LM LAK ++E V+ G+ AP +G +YVR+ V+ ++ LRCL+VADDVWE+ VV++LR+TGM VLLTTR PE+ E +++D L AEAE +L AAELP G RL D ++ V E+CG + M V W ++R N V AW VE + V+ M GN N A + R+A+LRAGF+ +G +D ++ LY LAV P+G+ FG +AAVLL + E+A ++ LE W ++ + YR + A +DFAR+ +M R +R + RW ++S L+ V + L+ +WRA+E VGG+GW A R YD L ++ S+P
Sbjct: 90 IDVKPLQECVDKLKEVAERYH-DRGRLARLAQFRRDGEDIQRLRKRIEDVVPIMGLSGVVNNGEKLDQILARLQPG---------------PKLAPVPKKAPFTKSFHVVRDGVVDRVCKILGGDGGPAMAALTGGSGAGKTTSAAAMVGE------------------RGDRVRALFPDGVVWLWVGREAGTADRLPSLMSNLAKRLHEDVMKGA-----VDAPTGD-----DGVSYVRKIVS----------QEKLRCLVVADDVWEASVVQKLRETGMWVLLTTRFPEM--GEPEERVVMDT-LIPAEAEDVLRGAAELPLGERLCDASMKVLEICGRVAMDTAFVGSWTSVRTTNGVPKSNKAWERTVEELTAQIDHVRGQMKV----GNTGEDNDRA--INRLAVLRAGFKYIGREDPLAQELYVKLAVFPEGFLFGESDAAVLL-------ENEEVAKGPISILERWGVLRTD-ASEKYRTHDAHADFARKKLMD-RNDLREPAVERWTEHISRLDFAVGVEIFVLLPMWRALEEVGGKGWWALRPYDDQLIQMVTSNP 582 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4769.11823.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4769.11823.1 >prot_H-paniculata_contig4769.11823.1 ID=prot_H-paniculata_contig4769.11823.1|Name=mRNA_H-paniculata_contig4769.11823.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=881bp MGLAAVVQVSEEEVRRMERVEQGGGGEVANKRRNFSKGQKLPAVPADAPKback to top mRNA from alignment at H-paniculata_contig4769:3443..13098- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4769.11823.1 ID=mRNA_H-paniculata_contig4769.11823.1|Name=mRNA_H-paniculata_contig4769.11823.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9656bp|location=Sequence derived from alignment at H-paniculata_contig4769:3443..13098- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4769:3443..13098- >mRNA_H-paniculata_contig4769.11823.1 ID=mRNA_H-paniculata_contig4769.11823.1|Name=mRNA_H-paniculata_contig4769.11823.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=5286bp|location=Sequence derived from alignment at H-paniculata_contig4769:3443..13098- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |