mRNA_H-paniculata_contig4768.11822.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig4768.11822.1
Unique NamemRNA_H-paniculata_contig4768.11822.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig4768.11822.1 vs. uniprot
Match: D8LJ51_ECTSI (N/a n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ51_ECTSI)

HSP 1 Score: 259 bits (663), Expect = 1.180e-71
Identity = 223/403 (55.33%), Postives = 250/403 (62.03%), Query Frame = 1 
Query:  622 SVQNRRRLERNAREQKRSLKITQRIEDLRRMLSQFGVDVKTSKSAVLSEATDYIAHLQRQQVHFEAERARLLQLLHQATQTSATATDTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-AGEVAIKSKPQEECFVGDGAGGLVDALLGDERPKHQAQPISATVASGAASGTSQGGITRDSGNQPASACSLPSDVFPGLSSARGQPSAIQFF-SAQGAGETLAPGMMVAGGAIQQIASV--GRVGRIETPPXXXXTLE------VATARALSHVNYERVFRTASVPMAIANVNGNLVDCNARLTLATGFQREEVLFMTIFDLVADPFLQHTFSMISSILNLPGVA-NPSSFQVLGKRRDGSHGG-VVQVSVVQDEAFRPLHFTICVLDN--TAGASA 1788
            +VQN+RRLERNAREQKRSLKI+QRIEDLRRMLSQFGVDVK SKSAVLSEATDYIAHLQRQ    EAERAR+LQLLH +   S       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       AG   +  +P            ++D LL  +      +P SA  A                    A A   P    P     +G+   +  F S        A GM VA  A    A+   GR        XXXX          ATARALSHVNYERVFRT  +PMAIANVNGNLVDCN RLT  TGF++EE LFMTIFDLVADPFLQHTFSMISSIL++ GV  NP  FQV GK  +G+ GG VVQ+S V D+  RP+HF IC+LD+  T G SA
Sbjct:  266 TVQNKRRLERNAREQKRSLKISQRIEDLRRMLSQFGVDVKASKSAVLSEATDYIAHLQRQHAQSEAERARILQLLHNSRAASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGGGDRGAGVGVVVERPSSNT--------MLDTLLSLDDDGDMGRPTSAMTA--------------------ARAMVFPPPTPP----QQGEEQIVPGFPSLSATARRGADGMPVAPSAAAGAAAXXXGRAXXXXXXXXXXXXXXXXXXNLAATARALSHVNYERVFRTLPMPMAIANVNGNLVDCNTRLTQVTGFRKEEALFMTIFDLVADPFLQHTFSMISSILSMRGVTGNPPFFQVPGKIFNGNPGGGVVQISAVHDDQLRPMHFCICILDSPATGGVSA 636
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BLAST of mRNA_H-paniculata_contig4768.11822.1 vs. uniprot
Match: A0A835YRU1_9STRA (BHLH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRU1_9STRA)

HSP 1 Score: 111 bits (277), Expect = 2.130e-23
Identity = 108/377 (28.65%), Postives = 148/377 (39.26%), Query Frame = 1 
Query:  631 NRRRLERNAREQKRSLKITQRIEDLRRMLSQFGVDVKTSKSAVLSEATDYIAHLQRQQVHFEAERARLLQLLHQATQTSATATDTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGEVAIKSKPQEECFVGDGAGGLVDALLGDERPKHQAQPISATVASGAASGTSQGGITRDSGNQPASACSLPSDVFPGLSSARGQPSAIQFFSAQGAGETLAPGMMVAGGAIQQIASVGRVGRIETPPXXXXTLEVATARALSHVNYERVFRTASVPMAIANVNGNLVDCNARLTLATGFQREEVLFMTIFDLVADPFLQHTFSMISSILNLPGVAN--PSSFQVLGKRRDGSHGGVVQVSVVQDEAFRPLHFTI 1755
            ++RRLERNAREQKRSLKI+QRI++LR +L Q G+ VK SKS VL E T+ I  L RQQ   EAERA +L                                                                          GLV  L                         S GG T                                    QG                                XXXX        A   ++Y+ +F  A++P+A+ ++NGN+V+CN+R+ +ATGF+R+E+L +T+F+LVAD +LQ +F++IS  L+ P  A   P    +  K RDG  GGV+ VS+V+D+  RP  F I
Sbjct:   19 DKRRLERNAREQKRSLKISQRIDELRLLLRQSGISVKNSKSHVLQEGTNLIKLLLRQQGALEAERAHML--------------------------------------------------------------------------GLVQML-------------------------SAGGNT------------------------------------QGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASVGMDYQLIFHNAAIPLAVCSINGNIVECNSRMCVATGFRRDELLLLTVFNLVADAYLQRSFALISGALSAPAAAGAPPQHVDLPCKVRDGRPGGVLSVSLVRDDIMRPRFFAI 260
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BLAST of mRNA_H-paniculata_contig4768.11822.1 vs. uniprot
Match: A0A835Z815_9STRA (BHLH domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z815_9STRA)

HSP 1 Score: 109 bits (273), Expect = 1.630e-22
Identity = 133/383 (34.73%), Postives = 178/383 (46.48%), Query Frame = 1 
Query:  625 VQNRRRLERNAREQKRSLKITQRIEDLRRMLSQFGVDVKTSKSAVLSEATDYIAHLQRQQVHFEAERARLLQLLHQATQTSATATDTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGEVAIKSKPQEECFVGDGAGGLVDALLGDERPKHQAQPISATVASGAASGTSQGGITRDSGNQPASACSLPSDVFPGLSSARGQPSAIQFFSAQGAGETLAPGMMVAGGAIQQIASVGRVGRIETPPXXXXTLEVATARALSHVNYERVFRTASVPMAIANVNGNLVDCNARLTLATGFQREEVLFMTIFDLVADPFLQHTFSMISSILNLPGVANPSSFQ------VLGKRRDGSHGGVVQVSVVQDEAFRPLHFTI 1755
            V ++RRLERNAREQ+RSLKI+Q+I++LR +L Q GV VK+SKS +L EAT  I  LQR+Q   E ER  LLQL+   + +S+      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                                                                                       ASVG                         ++Y+ +F  A++P+A+ +VNGN+VDCNAR+   TG++REE+L +T+F+LVAD FLQ +F++IS +L + G A  ++ Q      +  K RDG  GGV+ +++V+DE  RP  F I
Sbjct:   64 VVDKRRLERNAREQRRSLKISQKIDELRALLRQSGVMVKSSKSNILQEATQLICALQRRQALLEGERNHLLQLVQGLSGSSSAQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------------------------------------------------------------------------------------------------------------------ASVG-------------------------MDYQLIFHNAAIPLAVGSVNGNIVDCNARMCAFTGYRREELLALTVFNLVADAFLQQSFALISGMLTVAGAAAAAAQQRGAHVDMPCKLRDGQPGGVLSIALVRDELLRPRFFAI 302
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BLAST of mRNA_H-paniculata_contig4768.11822.1 vs. uniprot
Match: A0A7S2CTA7_9STRA (Hypothetical protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CTA7_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 6.470e-6
Identity = 35/66 (53.03%), Postives = 49/66 (74.24%), Query Frame = 1 
Query:  622 SVQNRRRLERNAREQKRSLKITQRIEDLRRMLSQFGVDVKTSKSAVLSEATDYIAHLQRQQVHFEA 819
            S  ++RRL+RNAREQ+RS KIT +I+ LR++L   G  VK++KS+VLSE  DYI  LQ+++   EA
Sbjct:  457 SAPDKRRLDRNAREQRRSKKITSQIDQLRQVLRAAGRPVKSNKSSVLSETADYIRDLQKKRQALEA 522
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BLAST of mRNA_H-paniculata_contig4768.11822.1 vs. uniprot
Match: A0A7R9W9V5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W9V5_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 1.540e-5
Identity = 35/69 (50.72%), Postives = 50/69 (72.46%), Query Frame = 1 
Query:  637 RRLERNAREQKRSLKITQRIEDLRRMLSQFGVDV-KTSKSAVLSEATDYIAHLQRQQVHFEAERARLLQ 840
            +R ERNARE++RS +I+++I +LR +LS  GV V K +KSAVL+EA +YI  LQ+ Q   E +R  L+Q
Sbjct:   41 KREERNAREKERSFRISRQINELRNLLSSGGVIVPKGTKSAVLTEAANYIRMLQQHQYRSEIDRQHLVQ 109
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BLAST of mRNA_H-paniculata_contig4768.11822.1 vs. uniprot
Match: A0A7S1XXW7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XXW7_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 2.950e-5
Identity = 34/73 (46.58%), Postives = 50/73 (68.49%), Query Frame = 1 
Query:  628 QNRRRLERNAREQKRSLKITQRIEDLRRMLSQFGVDVKTSKSAVLSEATDYIAHLQRQQVHFEAERARLLQLL 846
            + +RR ERN REQKRSLKI+++I++L  +L+  G  VK +KS++L EA  YI HLQ      E ER++ + +L
Sbjct:   99 EKKRRQERNHREQKRSLKISRKIDELHEILTDSGRMVKANKSSILREAFSYIMHLQGVLARKEYERSQFVNIL 171
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BLAST of mRNA_H-paniculata_contig4768.11822.1 vs. uniprot
Match: A0A7R9U539_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U539_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 6.120e-5
Identity = 33/73 (45.21%), Postives = 51/73 (69.86%), Query Frame = 1 
Query:  628 QNRRRLERNAREQKRSLKITQRIEDLRRMLSQFGVDVKTSKSAVLSEATDYIAHLQRQQVHFEAERARLLQLL 846
            + RRR ERN REQ+RSLKI+++I++L  +L+  G +VK +KSA+L++A  YI +LQ      E ER + + +L
Sbjct:  154 EKRRRKERNQREQRRSLKISKKIDELHEILTGSGRNVKPNKSAILNDAHQYIQYLQSTMARKEFERNQFVDVL 226
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BLAST of mRNA_H-paniculata_contig4768.11822.1 vs. uniprot
Match: A0A7S3KX76_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KX76_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 7.940e-5
Identity = 35/73 (47.95%), Postives = 54/73 (73.97%), Query Frame = 1 
Query:  625 VQNRRRLERNAREQKRSLKITQRIEDLRRMLSQFGVDV-KTSKSAVLSEATDYIAHLQRQQVHFEAERARLLQ 840
            +  R+R+ERNARE++RS +I+++I +LR +LS  GV V K +KS+VL+EA +YI  LQ+ Q   E +R +L+Q
Sbjct:  231 LDERKRVERNAREKERSFRISKQINELRGLLSSGGVIVPKGTKSSVLTEAANYIRMLQQHQYRSEIDRHQLIQ 303
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4768.11822.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D8LJ51_ECTSI1.180e-7155.33N/a n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ51_ECT... [more]
A0A835YRU1_9STRA2.130e-2328.65BHLH domain-containing protein n=1 Tax=Tribonema m... [more]
A0A835Z815_9STRA1.630e-2234.73BHLH domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7S2CTA7_9STRA6.470e-653.03Hypothetical protein n=2 Tax=Florenciella parvula ... [more]
A0A7R9W9V5_9STRA1.540e-550.72Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A7S1XXW7_9STRA2.950e-546.58Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7R9U539_9STRA6.120e-545.21Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S3KX76_9STRA7.940e-547.95Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4768contigH-paniculata_contig4768:6219..11169 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score62.4
Seed ortholog evalue8e-07
Seed eggNOG ortholog159749.K0SGS0
Hectar predicted targeting categoryother localisation
EggNOG free text desc.helix loop helix domain
EggNOG OGs2C415@1,2T5J0@2759,2XF85@2836
Ec32 ortholog descriptionbHLH and PAS domain protein
Ec32 orthologEc-02_004780.1
COG Functional cat.S
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
Exons5
Model size2710
Cds size1716
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930414.6044695-UTR-H-paniculata_contig4768:6218..70441622930414.6044695-UTR-H-paniculata_contig4768:6218..7044Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4768 6219..7044 -
1691481281.365758-UTR-H-paniculata_contig4768:6218..70441691481281.365758-UTR-H-paniculata_contig4768:6218..7044Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4768 6219..7044 -
1622930414.7810452-UTR-H-paniculata_contig4768:11001..111691622930414.7810452-UTR-H-paniculata_contig4768:11001..11169Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4768 11002..11169 -
1691481281.4314165-UTR-H-paniculata_contig4768:11001..111691691481281.4314165-UTR-H-paniculata_contig4768:11001..11169Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4768 11002..11169 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930414.6860247-CDS-H-paniculata_contig4768:7044..73211622930414.6860247-CDS-H-paniculata_contig4768:7044..7321Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4768 7045..7321 -
1691481281.3760712-CDS-H-paniculata_contig4768:7044..73211691481281.3760712-CDS-H-paniculata_contig4768:7044..7321Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4768 7045..7321 -
1622930414.7154653-CDS-H-paniculata_contig4768:7605..82821622930414.7154653-CDS-H-paniculata_contig4768:7605..8282Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4768 7606..8282 -
1691481281.3871713-CDS-H-paniculata_contig4768:7605..82821691481281.3871713-CDS-H-paniculata_contig4768:7605..8282Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4768 7606..8282 -
1622930414.731638-CDS-H-paniculata_contig4768:8519..91341622930414.731638-CDS-H-paniculata_contig4768:8519..9134Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4768 8520..9134 -
1691481281.4026206-CDS-H-paniculata_contig4768:8519..91341691481281.4026206-CDS-H-paniculata_contig4768:8519..9134Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4768 8520..9134 -
1622930414.7503376-CDS-H-paniculata_contig4768:10776..108751622930414.7503376-CDS-H-paniculata_contig4768:10776..10875Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4768 10777..10875 -
1691481281.4130516-CDS-H-paniculata_contig4768:10776..108751691481281.4130516-CDS-H-paniculata_contig4768:10776..10875Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4768 10777..10875 -
1622930414.7648304-CDS-H-paniculata_contig4768:10953..110011622930414.7648304-CDS-H-paniculata_contig4768:10953..11001Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4768 10954..11001 -
1691481281.4222713-CDS-H-paniculata_contig4768:10953..110011691481281.4222713-CDS-H-paniculata_contig4768:10953..11001Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4768 10954..11001 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4768.11822.1prot_H-paniculata_contig4768.11822.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig4768 7045..11001 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig4768.11822.1

>prot_H-paniculata_contig4768.11822.1 ID=prot_H-paniculata_contig4768.11822.1|Name=mRNA_H-paniculata_contig4768.11822.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=572bp
MSGCGAGRRGGNGGTAAFVVPTSLKTRLDKVNRPTVKEVRAFFFSSIRIR
RLQQIMTETQAQSKRSNIGSRGGRVDSKSRQRALGGVVGTGSTGATAGKK
DGRGGGGGGGARGKSRFKSSTSSTTTISMMNYGSDTGGGGGGGGSGEGKG
TSVQNRRRLERNAREQKRSLKITQRIEDLRRMLSQFGVDVKTSKSAVLSE
ATDYIAHLQRQQVHFEAERARLLQLLHQATQTSATATDTGGGGGALGGGE
TAAAEAADPAGEVVVARHGGGGGSGGAGEVAIKSKPQEECFVGDGAGGLV
DALLGDERPKHQAQPISATVASGAASGTSQGGITRDSGNQPASACSLPSD
VFPGLSSARGQPSAIQFFSAQGAGETLAPGMMVAGGAIQQIASVGRVGRI
ETPPPPPPTLEVATARALSHVNYERVFRTASVPMAIANVNGNLVDCNARL
TLATGFQREEVLFMTIFDLVADPFLQHTFSMISSILNLPGVANPSSFQVL
GKRRDGSHGGVVQVSVVQDEAFRPLHFTICVLDNTAGASAFVGGGRGGNP
GIMMATPNLRTPDGAVVGGLS*
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mRNA from alignment at H-paniculata_contig4768:6219..11169-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig4768.11822.1 ID=mRNA_H-paniculata_contig4768.11822.1|Name=mRNA_H-paniculata_contig4768.11822.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4951bp|location=Sequence derived from alignment at H-paniculata_contig4768:6219..11169- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GGGGAAACGGACTCGGATAATGATGTCGATTCTAATTCGCCTGGGGCTGG
GGCATCGGGGCCAGGGCCACCCGACTATCGCGCGATCGGAGGTAGCGGAG
GCCGTGGCAGGGCTGGGGGAGAATGTGCAAAGAAGCGCGCCCGGGATGGA
AGTAACTCTTCTCGTGACATGTCCGGGTGTGGTGCGGGAAGGCGAGGGGG
AAATGGAGGGACGGCTGTGCAGCATGGAGGCGATGGTGGGAGGGACGAGG
GGCGGGGGGAAACAAGTAGGCAACCTTGCTCGGAAGGGTTGCAGGCATTT
GTAGTCCCGACGTCGCTCAAGACGAGGCTCGACAAGGTCAACAGGCCGAC
CGTGAAAGAGGTAAGAGCCTTTTTTTTTTCTTCGATACGAATTGTTTTGG
GGATCAGACTTTGGATTTTTCGCAGTAAAAAAAATGCATAATATCGTGCG
GGACTCGAAAGTTTTCAATGGGTGCTGAACTGATTTTTTTGTTATTTCAC
GACTACACACCACCGCACCACAGATATCTTGACTCATCGGGCACCGATCG
AGACGAACTCTTTTGTATCCTATCCTCCAACTATCTGAGGTGAGGTGTGC
CAAATTTCAGATCGCGATACGAAGCCTGGCGTTCGCAGTACTCTCTGTAA
AACCCAGTCATAATTCGGGTTTCGTCGCACTGGAGAGCACTGGGAACGCC
AGACTTCGTACCGCAGTCTGAAACCTCGGCACACCTACCTCATCACAGAG
AGTTGGAGGATAGGATGGGTGCAAAAGAGTTCGTCTCGATCAGTCTTGCG
GTAATGTGTACACTCGTAAAATAATCGAGAATACAGCTTTGCACCCAGTG
AAAACTTTCGAGTCCCATGCCATGTTTCGCAAAATTCTGCTTGGGAAAAA
ATCCAATTTTGATCTCCATAACAATTGGCGTCCTCATGTACGATTACTTT
TATAAAGTTGGAACATGTCTATCTGAAAACATGCAGTATAATAGTTCAGA
TCAGTCAACTTTTATGGGTTTTAACTATTTGTCGGGTTGAGATGTACAAA
TGACTTCCTTGTCGAAGTTTCGCAAGTTTAAAACTGGTGTAGATGTTTTG
CCAGCAACTGATTGTCGTGAGCCGGGTTGGAGGAATACGTCCGTATTTTC
AAAACCAACCTTCGTCGGGTTTTCAGCTGGAGTGACTCCAATGTCCGCAT
CTCAATGCTACATGCGTGTCGTGAGTTCAACTGGATCACGGTTGCTTGCA
AAACAAACTTTCATTTCAATTGTTGAGCTGTCCGGAGCCGTGACTACCCT
TGTGCACTTCCAAACAGGGGGAAATCTCGCTGCTCCCTTTTTCAGTGAAA
ATATTACATTTTCGCATATATTTTGAAAAGTGATTGTCGAGTGTCCGAGC
TCACTCCTAGAGATAACGTGAAACATATAGTAGATGGTAAAAAGTATAAG
ACCATTTTTTTATTATGTCAGACCATCGTTCCGTAGGGTGGTGGTTATGG
TAGTGGAACTGCATAGTTGTTAATGGCACATGGGTTTCTCCTGCTGCTCA
GCAGGTGAAACACGCACACAGAACACACACACACGCCACGGCGCCACCTG
CGAATGGCTTCACTGTACTGCATAAGAAATGAAACAATGTGTACCTATAG
CTGGCGGAAAGTTCGCACGGACGTTGCTACTTGTAAATAACCCAGTGGTG
TTTGTAGGTCATATTTTTGAAGGCAAAGATGGACATATTCGAGCGATAGC
CACAACCCACCACCTTTCCCCATGTGAAGTGGATACATCAATAATCGCGT
TTGCCTTATACAATGTAAAAGGTAATGCGCAATTTTTTCTCTCTAATCAC
AGCAATTTTGTCTGATTTCGATTTCAAAAGTCCTATTTGATACTTCTACA
ATAAATATCTTGGAGGACCAGTACCTCCTTCCCAGTCCCTAAGCTAAGAA
AACGCACACTCGCGCGCCTAAATTCCCCCGAACTCCTCCCCAATTACGCC
TTCCTCCTGATGCACGGTTTGACATACAGGAGCAGCGACGACTCCAACAA
ATTATGACAGAGACACAAGCGCAATCGAAACGCAGCAACATTGGTAGCCG
CGGCGGACGGGTTGACTCGAAAAGCCGGCAGCGCGCATTGGGCGGGGTGG
TGGGGACAGGGAGTACAGGAGCCACGGCAGGCAAGAAAGATGGGCGCGGG
GGGGGGGGGGGGGGAGGGGCAAGAGGAAAATCGCGTTTCAAGTCGTCTAC
CTCATCGACAACAACAATTTCCATGATGAATTATGGTTCGGATACCGGTG
GGGGAGGCGGCGGCGGCGGCAGTGGGGAGGGAAAGGGAACCAGCGTGCAA
AACAGAAGACGGTTGGAGCGGAACGCCCGCGAGCAGAAACGTTCGCTGAA
GATCACCCAGCGCATCGAGGACTTGCGGCGAATGCTCAGCCAGTTCGGAG
TAGACGTGAAGACCTCCAAGTCAGCCGTGCTCTCCGAGGCGACCGACTAT
ATCGCCCACCTGCAGCGCCAGCAAGTGCACTTCGAAGCGGAGCGCGCGCG
GCTGCTGCAGCTCTTGCACCAGGCCACACAAACCAGCGCCACGGCGACGG
ACACCGGCGGCGGCGGCGGCGCCCTAGGCGGAGGGGAAACCGCCGCCGCC
GTCGTCGCTGCTGCTGGGTCGATACCACCTGCTGCTTCGTCAATCGCCTT
CGGTGGCGTTGGCAGAACAGTCGGCAGCGTCCGTGGCACCCCCGCATCAA
CGGATGGCCTTGGCGGGGAGGGCGTACAACCGGAAGGACCGGGTTCGTTG
GCAGGGATTGGCGACGGCACGGCTTCAACTGCGTCATCGAGAAATTCTTC
TACGAGCCATTCCTCAGTTTCCCAGGGTTTCGGGGAGGAGGCCGCAGACC
CCGCTGGCGAAGTTGTTGTGGCACGCCACGGGGGCGGCGGCGGCAGCGGC
GGCGCTGGCGAGGTTGCGATCAAGTCCAAACCTCAAGAAGAGTGTTTCGT
GGGCGATGGCGCGGGGGGATTGGTAGACGCACTCCTTGGAGATGAAAGAC
CAAAGCACCAAGCACAGCCCATCTCGGCAACGGTAGCATCCGGTGCGGCG
TCGGGAACATCGCAGGGCGGTATCACTCGTGATTCGGGTAATCAGCCGGC
CAGTGCGTGCTCCCTCCCGTCCGACGTATTTCCCGGATTGTCATCAGCAA
GAGGACAACCTTCAGCGATACAGTTTTTTTCTGCACAGGGAGCAGGAGAA
ACGCTAGCGCCAGGCATGATGGTGGCGGGCGGGGCGATACAGCAAATCGC
TTCGGTGGGCCGGGTGGGAAGAATTGAAACGCCGCCGCCGCCGCCGCCGA
CCCTCGAGGTGGCGACCGCACGAGCGCTCTCGCACGTAAACTACGAGAGG
GTGTTCCGGACTGCGTCAGTGCCCATGGCGATCGCGAACGTCAACGGGAA
CCTGGTGGACTGTAACGCCCGGCTGACGCTGGCTACAGGTTTCCAGAGGG
AGGAGGTGTTGTTCATGACCATCTTTGATCTCGTGGCAGATCCGTTTCTT
CAGCATACCTTCAGGTGATTTGTCTATCTCTCACAGTGTACCTACCTACT
TGCAGTTAAGATTTTCATGAGATATCTGTTGGGATGCCAAGAGCTTTCTT
CCAGTTTTCTTCGCTACCGTGAGGGAGCATGTTGGATTTCGTTATCCTTT
TTTGTTATCCCATACGTATTGTGTCATTGCCCAGCCGCGAGGTTTGGTTG
ACAATACTCCCTCCCAACTACGTCTCCACGAACCCTCTCAAAACCCTCCC
CCGTCCGCACCCTCACCCCGCCGCGCCCCGGCCCCCTTCTCTCCGCAGCA
TGATCAGCTCAATCCTAAATCTACCGGGTGTGGCGAATCCGTCATCTTTC
CAAGTTCTCGGCAAGCGTCGCGACGGAAGCCATGGGGGGGTGGTTCAGGT
ATCGGTCGTTCAAGATGAGGCCTTCCGGCCACTGCACTTCACTATTTGTG
TGTTGGACAATACAGCAGGCGCCAGTGCCTTCGTGGGAGGAGGTAGAGGC
GGCAACCCAGGAATCATGATGGCTACTCCTAATCTGAGAACGCCTGATGG
CGCCGTGGTGGGAGGGCTCTCGTGACTTCAATCCCGAATAGAAGATGTAG
TGCCGTTTGTAAGGTGGCGCTAAGCCCATCCAATGGGGTCCTGGAGCAAA
TTACGTGTATTTGTTGAAGCCCATCAGTTGTGGTCTGCAGTATGGCTTGA
TTCTCCTGGCGGGATGTTGGAGGTGGGGTGACCGTTGTTCAAGGATCGGT
TCAATGTTTCGAGCGAGGAATGAACAAAACGTGGGGAATACGAGAAATAC
GGTGTACGGTAGATTGAAACGACTGGTTTATCAGGGTGAAAAGATAGGCG
AGCCGGGCACGGGCGTCTCCCTAGTCCCTTGACTTGGGGAAGTAATGGCG
AGCTGTTGAGTGGGGCGGATATGTTTCTGTAGACAGTGGAAACAAGTGTT
CTCCCGTGTTCTCCCTCATAATATTGTGCTGAATCGCGCAAAAAAAAAAC
GAACTATATTCGGGCGAAAATACAAAGCATGGGCTGGTCTATCTATTTGT
ATCTTTTTTCCAAGTTGCGTTGAAGCAGGCAGGTGCAGAGACAACACGGG
GGGTGAAAATATGGAAATTTATACCGTAGTCGGTAACGATTGAGTGGTGG
CGTCTTGTGTTAGCTTTAGTTTATTCTCGGAATGGGTCAAATTCGAAATA
TTATCGAAACAGTAGAAGCGGGGCTTGAAGGCTGTCGCGGAGAACGAAAC
ACTTACAAGCACGTTCACTGAGGGGTATTCCTGTGAGGGTATAGCTGGAA
GCATTTCTTCCTTTGGGGAAACAAGGAAGAAAGAAAGACCATGCACGATG
TTTTCTGAATCGCCTGCTGAAACGTAGATGGGAGAACGGTGGAGCGAGGG
G
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Coding sequence (CDS) from alignment at H-paniculata_contig4768:6219..11169-

>mRNA_H-paniculata_contig4768.11822.1 ID=mRNA_H-paniculata_contig4768.11822.1|Name=mRNA_H-paniculata_contig4768.11822.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3432bp|location=Sequence derived from alignment at H-paniculata_contig4768:6219..11169- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCCGGGTGTGGTGCGGGAAGGCGAGGGGGAAATGGAGGGACGGCTAT
GTCCGGGTGTGGTGCGGGAAGGCGAGGGGGAAATGGAGGGACGGCTGCAT
TTGTAGTCCCGACGTCGCTCAAGACGAGGCTCGACAAGGTCAACAGGCCG
ACCGTGAAAGAGGTAAGAGCCTTTTTTTTTTCTTCGATACGAATTGCATT
TGTAGTCCCGACGTCGCTCAAGACGAGGCTCGACAAGGTCAACAGGCCGA
CCGTGAAAGAGGTAAGAGCCTTTTTTTTTTCTTCGATACGAATTCGACGA
CTCCAACAAATTATGACAGAGACACAAGCGCAATCGAAACGCAGCAACAT
TGGTAGCCGCGGCGGACGGGTTGACTCGAAAAGCCGGCAGCGCGCATTGG
GCGGGGTGGTGGGGACAGGGAGTACAGGAGCCACGGCAGGCAAGAAAGAT
GGGCGCGGGGGGGGGGGGGGGGGAGGGGCAAGAGGAAAATCGCGTTTCAA
GTCGTCTACCTCATCGACAACAACAATTTCCATGATGAATTATGGTTCGG
ATACCGGTGGGGGAGGCGGCGGCGGCGGCAGTGGGGAGGGAAAGGGAACC
AGCGTGCAAAACAGAAGACGGTTGGAGCGGAACGCCCGCGAGCAGAAACG
TTCGCTGAAGATCACCCAGCGCATCGAGGACTTGCGGCGAATGCTCAGCC
AGTTCGGAGTAGACGTGAAGACCTCCAAGTCAGCCGTGCTCTCCGAGGCG
ACCGACTATATCGCCCACCTGCAGCGCCAGCAAGTGCACTTCGAAGCGGA
GCGCGCGCGGCTGCTGCAGCTCTTGCACCAGGCCACACAAACCAGCGCCA
CGGCGACGGACACCGGCGGCGGCGGCGGCGCCCTAGGCGGAGGGGAAACC
GCCGCCGCCCGACGACTCCAACAAATTATGACAGAGACACAAGCGCAATC
GAAACGCAGCAACATTGGTAGCCGCGGCGGACGGGTTGACTCGAAAAGCC
GGCAGCGCGCATTGGGCGGGGTGGTGGGGACAGGGAGTACAGGAGCCACG
GCAGGCAAGAAAGATGGGCGCGGGGGGGGGGGGGGGGGAGGGGCAAGAGG
AAAATCGCGTTTCAAGTCGTCTACCTCATCGACAACAACAATTTCCATGA
TGAATTATGGTTCGGATACCGGTGGGGGAGGCGGCGGCGGCGGCAGTGGG
GAGGGAAAGGGAACCAGCGTGCAAAACAGAAGACGGTTGGAGCGGAACGC
CCGCGAGCAGAAACGTTCGCTGAAGATCACCCAGCGCATCGAGGACTTGC
GGCGAATGCTCAGCCAGTTCGGAGTAGACGTGAAGACCTCCAAGTCAGCC
GTGCTCTCCGAGGCGACCGACTATATCGCCCACCTGCAGCGCCAGCAAGT
GCACTTCGAAGCGGAGCGCGCGCGGCTGCTGCAGCTCTTGCACCAGGCCA
CACAAACCAGCGCCACGGCGACGGACACCGGCGGCGGCGGCGGCGCCCTA
GGCGGAGGGGAAACCGCCGCCGCCGAGGCCGCAGACCCCGCTGGCGAAGT
TGTTGTGGCACGCCACGGGGGCGGCGGCGGCAGCGGCGGCGCTGGCGAGG
TTGCGATCAAGTCCAAACCTCAAGAAGAGTGTTTCGTGGGCGATGGCGCG
GGGGGATTGGTAGACGCACTCCTTGGAGATGAAAGACCAAAGCACCAAGC
ACAGCCCATCTCGGCAACGGTAGCATCCGGTGCGGCGTCGGGAACATCGC
AGGGCGGTATCACTCGTGATTCGGGTAATCAGCCGGCCAGTGCGTGCTCC
CTCCCGTCCGACGTATTTCCCGGATTGTCATCAGCAAGAGGACAACCTTC
AGCGATACAGTTTTTTTCTGCACAGGGAGCAGGAGAAACGCTAGCGCCAG
GCATGATGGTGGCGGGCGGGGCGATACAGCAAATCGCTTCGGTGGGCCGG
GTGGGAAGAATTGAAACGCCGCCGCCGCCGCCGCCGACCCTCGAGGTGGC
GACCGCACGAGCGCTCTCGCACGTAAACTACGAGAGGGTGTTCCGGACTG
CGTCAGTGCCCATGGCGATCGCGAACGTCAACGGGAACCTGGTGGACTGT
AACGCCCGGCTGACGCTGGCTACAGGTTTCCAGAGGGAGGAGGTGTTGTT
CATGACCATCTTTGATCTCGTGGCAGATCCGTTTCTTCAGCATACCTTCA
GGAGGCCGCAGACCCCGCTGGCGAAGTTGTTGTGGCACGCCACGGGGGCG
GCGGCGGCAGCGGCGGCGCTGGCGAGGTTGCGATCAAGTCCAAACCTCAA
GAAGAGTGTTTCGTGGGCGATGGCGCGGGGGGATTGGTAGACGCACTCCT
TGGAGATGAAAGACCAAAGCACCAAGCACAGCCCATCTCGGCAACGGTAG
CATCCGGTGCGGCGTCGGGAACATCGCAGGGCGGTATCACTCGTGATTCG
GGTAATCAGCCGGCCAGTGCGTGCTCCCTCCCGTCCGACGTATTTCCCGG
ATTGTCATCAGCAAGAGGACAACCTTCAGCGATACAGTTTTTTTCTGCAC
AGGGAGCAGGAGAAACGCTAGCGCCAGGCATGATGGTGGCGGGCGGGGCG
ATACAGCAAATCGCTTCGGTGGGCCGGGTGGGAAGAATTGAAACGCCGCC
GCCGCCGCCGCCGACCCTCGAGGTGGCGACCGCACGAGCGCTCTCGCACG
TAAACTACGAGAGGGTGTTCCGGACTGCGTCAGTGCCCATGGCGATCGCG
AACGTCAACGGGAACCTGGTGGACTGTAACGCCCGGCTGACGCTGGCTAC
AGGTTTCCAGAGGGAGGAGGTGTTGTTCATGACCATCTTTGATCTCGTGG
CAGATCCGTTTCTTCAGCATACCTTCAGCATGATCAGCTCAATCCTAAAT
CTACCGGGTGTGGCGAATCCGTCATCTTTCCAAGTTCTCGGCAAGCGTCG
CGACGGAAGCCATGGGGGGGTGGTTCAGGTATCGGTCGTTCAAGATGAGG
CCTTCCGGCCACTGCACTTCACTATTTGTGTGTTGGACAATACAGCAGGC
GCCAGTGCCTTCGTGGGAGGAGGTAGAGGCGGCAACCCAGGAATCATGAT
GGCTACTCCTAATCTGAGAACGCCTGATGGCGCCGTGGTGGGAGGGCTCT
CGTGACATGATCAGCTCAATCCTAAATCTACCGGGTGTGGCGAATCCGTC
ATCTTTCCAAGTTCTCGGCAAGCGTCGCGACGGAAGCCATGGGGGGGTGG
TTCAGGTATCGGTCGTTCAAGATGAGGCCTTCCGGCCACTGCACTTCACT
ATTTGTGTGTTGGACAATACAGCAGGCGCCAGTGCCTTCGTGGGAGGAGG
TAGAGGCGGCAACCCAGGAATCATGATGGCTACTCCTAATCTGAGAACGC
CTGATGGCGCCGTGGTGGGAGGGCTCTCGTGA
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