prot_H-paniculata_contig4767.11821.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4767.11821.1
Unique Nameprot_H-paniculata_contig4767.11821.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length132
Homology
[Close]
BLAST of mRNA_H-paniculata_contig4767.11821.1 vs. uniprot
Match: D8LGI0_ECTSI (SFM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGI0_ECTSI)

HSP 1 Score: 75.1 bits (183), Expect = 3.620e-13
Identity = 42/78 (53.85%), Postives = 50/78 (64.10%), Query Frame = 0 
Query:   52 VIAVEVEAGNINIHQEQHMATFSFSRGQRRLFGNRRRRSSVEKASEVDRRAGETFSTMRNLAINCSQFGDTRPLSVIQ 129
            V  V   A +  +     +AT SF R + RL G +RRR + E+ S VDRRA ETFSTM+NLAIN SQF D RPLS IQ
Sbjct:  193 VEVVYTPASDALLEARAAIATMSFGRAKSRLAGAKRRRGTPEETSAVDRRAVETFSTMKNLAINSSQFADDRPLSAIQ 270
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4767.11821.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LGI0_ECTSI3.620e-1353.85SFM domain-containing protein n=2 Tax=Ectocarpus T... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4767contigH-paniculata_contig4767:1832..14618 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4767.11821.1mRNA_H-paniculata_contig4767.11821.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4767 1451..15240 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4767.11821.1 ID=prot_H-paniculata_contig4767.11821.1|Name=mRNA_H-paniculata_contig4767.11821.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=132bp
MSKAETSGNDKGAASAAAAAAVVGREKITPGGGKAGGDRDERGGGKEMGS
DVIAVEVEAGNINIHQEQHMATFSFSRGQRRLFGNRRRRSSVEKASEVDR
RAGETFSTMRNLAINCSQFGDTRPLSVIQCI*
back to top