prot_H-paniculata_contig47646.11819.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig47646.11819.1
Unique Nameprot_H-paniculata_contig47646.11819.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length224
Homology
BLAST of mRNA_H-paniculata_contig47646.11819.1 vs. uniprot
Match: A0A6G0WHK2_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WHK2_9STRA)

HSP 1 Score: 161 bits (407), Expect = 7.830e-45
Identity = 87/219 (39.73%), Postives = 139/219 (63.47%), Query Frame = 0
Query:    2 PKSAAEALKGPQAEKWRAAMEEEWGALVYNGTWESEDLGRLPAGLKATHTKWIFKRKLKEDGSVARYKARLVAQGFSPVEVEDFFETSAPVACLSTLRTVFSLASEYDFELEGMDLDAAYLNAPAEEELFVKLPPEFSPFSR---DVPFVRRLRNSLYGLTQSGQNWNNTLNGFLVGIGLDRSTTDSCLYSSRDDGGETNLLVAVYVDDLVIAGRREKV 217
            P +  EA++   A KW+ A E E  +L+ N TW   D+  LP G KA   KW+FK K K DGS+ +YKARLVA+G+S     D+ ET  PVA  +++R + SLA++++ EL+ MD++ A+LN+  +E++++++P   +         P V +L+ SLYGL Q+ + WN T++GF++ IG  +S  D C+Y  R D  E  +LV++YVDDL++A   +++
Sbjct:   45 PSTYQEAMESDNASKWKDACESEIKSLLDNKTW---DVVELPQGRKAIGCKWVFKVKEKADGSIDKYKARLVAKGYSQTFGIDYEETFTPVAKFTSIRVLLSLAAKHNLELQQMDVNTAFLNSDLDEDIYMEIPMGLNDHKNPGLSKP-VLKLKKSLYGLKQAPRLWNQTIDGFMLSIGFVKSKADHCIYIKRQD--EDIILVSLYVDDLILASNSDEM 257          
BLAST of mRNA_H-paniculata_contig47646.11819.1 vs. uniprot
Match: A0A182GIT5_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GIT5_AEDAL)

HSP 1 Score: 165 bits (417), Expect = 1.340e-44
Identity = 93/203 (45.81%), Postives = 124/203 (61.08%), Query Frame = 0
Query:    9 LKGPQAEKWRAAMEEEWGALVYNGTWESEDLGRLPAGLKATHTKWIFKRKLKEDGSVARYKARLVAQGFSPVEVEDFFETSAPVACLSTLRTVFSLASEYDFELEGMDLDAAYLNAPAEEELFVKLPPEFSPFSRDVPFVRRLRNSLYGLTQSGQNWNNTLNGFLVGIGLDRSTTDSCLYSSRDDGGETNLLVAVYVDDLVIA 211
            +KGP+AE W+AAM++E  +L  NGTW+  D   LP G KA   KWIFKRKL EDG+V RYKARLVAQGF+     D+ E  APV    T R + ++AS+    ++  D+  AYLN   EE +F++ PP +   +RD   V  L+ SLYGL Q+G  WN   +  L  +   +S  D CLY  R+  G T L++  YVDD+VIA
Sbjct:    1 MKGPEAELWKAAMDDEMTSLRENGTWQLTD---LPPGRKAVGCKWIFKRKLDEDGNVVRYKARLVAQGFTQKFGTDYDEVFAPVVRQVTFRVLLTVASQRGMVVKHADVKTAYLNGELEESIFMRQPPGYEDENRDA--VCSLQKSLYGLKQAGYVWNKKFDQVLKRMKFQQSKNDPCLYVRRNGKGYTYLVI--YVDDMVIA 196          
BLAST of mRNA_H-paniculata_contig47646.11819.1 vs. uniprot
Match: A0A182GDL1_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GDL1_AEDAL)

HSP 1 Score: 158 bits (399), Expect = 5.140e-44
Identity = 89/222 (40.09%), Postives = 137/222 (61.71%), Query Frame = 0
Query:    1 QPKSAAEALKGPQAEKWRAAMEEEWGALVYNGTWESEDLGRLPAGLKATHTKWIFKRKLKEDGSVARYKARLVAQGFSPVEVEDFFETSAPVACLSTLRTVFSLASEYDFELEGMDLDAAYLNAPAEEELFVKLPPEFSPFSRDVPFVRRLRNSLYGLTQSGQNWNNTLNGFLVGIGLDRSTTDSCLYSSRDDGGETNLLVAVYVDDLVIAGR-REKVDELK 221
            +P S  EA++  +++ W+AAM+EE+ +L+ NGTW    L  LPAG KA  +KW+FK+K    G+V ++KARLVAQGFS     D+    APVA  +TLRT+ S+A +   ++  +D+ +AYL+   +EEL+++ P  F     +   V RL+ SLYGL Q  + WN+T+   L  IG  +S  D CL+S    G +  LL+  YVDD+++A    E++D ++
Sbjct:    8 EPSSYEEAVRSSESDLWKAAMQEEYDSLMENGTWV---LAELPAGRKAIGSKWVFKKKEDSAGNVCKFKARLVAQGFSQQFGVDYDSVFAPVAAQTTLRTLLSVAGKKKMKVRHLDVKSAYLHGQLKEELYMQQPKGFVRRGEEK-LVCRLQRSLYGLKQGAKVWNDTICAILGEIGFHQSRADPCLFSKSVSGRQIYLLI--YVDDIIVASEVEEEIDPIE 223          
BLAST of mRNA_H-paniculata_contig47646.11819.1 vs. uniprot
Match: H3H7D1_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H7D1_PHYRM)

HSP 1 Score: 151 bits (382), Expect = 5.390e-42
Identity = 83/211 (39.34%), Postives = 129/211 (61.14%), Query Frame = 0
Query:    8 ALKGPQAEKWRAAMEEEWGALVYNGTWESEDLGRLPAGLKATHTKWIFKRKLKEDGSVARYKARLVAQGFSPVEVEDFFETSAPVACLSTLRTVFSLASEYDFELEGMDLDAAYLNAPAEEELFVKLPPEFSPFSRDVP-FVRRLRNSLYGLTQSGQNWNNTLNGFLVGIGLDRSTTDSCLYSSRDDGGETNLLVAVYVDDLVIAGRREKV 217
            A++   A KW+ A + E  +L+ N TW   D+  LP G KA   +W+F+ K  + G + R+KARLVA+GFS     D+ ET APVA  +++R V SLA++Y  +L  MD+  A+LN   +E++++  P  +     D P  V +L+ SLYGL QS + WN T++ F++ +G  +  +D C+Y  RD  G+  + VA+YVDDLV+A   +K+
Sbjct:    8 AMESSDAAKWKEACDSECDSLLKNDTW---DVVPLPKGRKAIGCRWVFRVKENQAGEIERFKARLVAKGFSQKYGIDYDETFAPVAKFTSIRIVLSLAAKYGLKLHQMDVKTAFLNGVLDEDIYMAQPDGY--VDEDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCIYLKRD--GQDMIFVALYVDDLVLASSSDKM 211          
BLAST of mRNA_H-paniculata_contig47646.11819.1 vs. uniprot
Match: A0A182G9H3_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182G9H3_AEDAL)

HSP 1 Score: 154 bits (388), Expect = 2.680e-41
Identity = 90/216 (41.67%), Postives = 128/216 (59.26%), Query Frame = 0
Query:    1 QPKSAAEALKGPQAEKWRAAMEEEWGALVYNGTWESEDLGRLPAGLKATHTKWIFKRKLKEDGSVARYKARLVAQGFSPVEVEDFFETSAPVACLSTLRTVFSLASEYDFELEGMDLDAAYLNAPAEEELFVKLPPEFSPFSRDVPFVRRLRNSLYGLTQSGQNWNNTLNGFLVGIGLDRSTTDSCLYSSRDDGGETNLLVAVYVDDLVIAGRREK 216
            +P++  EAL GP++E W+AA+EEE  +   N TW   ++  LP+G      KWIFKR++ E G V RYKARLVAQGF+     D+ E  APV    T RT+ S+A + +  ++ MD+  AYLN   +E +F+K PP     ++++  V  L+  LYGL ++   WN  LN  L  +G   S  D CLYS R+  G T   +AVYVDDL+I  + E+
Sbjct:  137 EPRTIKEALDGPESELWKAAIEEELQSHKENCTW---NVVPLPSGRITIGCKWIFKRRMDESGKVVRYKARLVAQGFTQKIGTDYDEVFAPVVKQVTFRTLLSVAHQRNMLIKHMDVKTAYLNGELQETVFMKPPPGCDFGNQNL--VCHLQKGLYGLKEAANIWNKKLNSILRKLGFKPSENDPCLYSKRNSDG-TMAYIAVYVDDLIIVCKSEE 346          
BLAST of mRNA_H-paniculata_contig47646.11819.1 vs. uniprot
Match: H3GB80_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB80_PHYRM)

HSP 1 Score: 149 bits (375), Expect = 2.760e-41
Identity = 82/211 (38.86%), Postives = 128/211 (60.66%), Query Frame = 0
Query:    8 ALKGPQAEKWRAAMEEEWGALVYNGTWESEDLGRLPAGLKATHTKWIFKRKLKEDGSVARYKARLVAQGFSPVEVEDFFETSAPVACLSTLRTVFSLASEYDFELEGMDLDAAYLNAPAEEELFVKLPPEFSPFSRDVP-FVRRLRNSLYGLTQSGQNWNNTLNGFLVGIGLDRSTTDSCLYSSRDDGGETNLLVAVYVDDLVIAGRREKV 217
            A++   A KW+ A + E  +L+ N TW   D+  LP G KA   +W+F+ K  + G + R+KARLVA+GFS     D+ ET APVA  +++R V SLA++Y  +L  MD+  A+LN   +E++++  P  +     D P  V +L+ SLYGL QS + WN T++ F++ +G     +D C+Y  RD  G+  + VA+YVDDLV+A   +++
Sbjct:    8 AMESSDAVKWKEACDSECDSLLKNDTW---DVVPLPKGRKAIGCRWVFRVKENQAGEIERFKARLVAKGFSQKYGIDYDETFAPVAKFTSIRIVLSLAAKYGLKLHQMDVKTAFLNGVLDEDIYMAQPDGY--VDEDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKNCESDHCVYLKRD--GQDMIFVALYVDDLVLASSNDEL 211          
BLAST of mRNA_H-paniculata_contig47646.11819.1 vs. uniprot
Match: A0A6B0V9W6_IXORI (Putative polyprotein n=1 Tax=Ixodes ricinus TaxID=34613 RepID=A0A6B0V9W6_IXORI)

HSP 1 Score: 152 bits (383), Expect = 4.360e-41
Identity = 90/221 (40.72%), Postives = 132/221 (59.73%), Query Frame = 0
Query:    2 PKSAAEALKGPQAEKWRAAMEEEWGALVYNGTWESEDLGRLPAGLKATHTKWIFKRKLKEDGSVARYKARLVAQGFSPVEVEDFFETSAPVACLSTLRTVFSLASEYDFELEGMDLDAAYLNAPAEEELFVKLPPEFSPFSRDVPFVRRLRNSLYGLTQSGQNWNNTLNGFLVGIGLDRSTTDSCLYSSRDDGGETNLLVAVYVDDL-VIAGRREKVDELK 221
            P++  EAL  P  EKW+AA++ E   L  +GTWE   L   P   +    KW+F +K  E+G + +YKARLVA G+S VE  D+ ET +PV  L ++RT+ ++A E ++++  +D+ AAYLN   +E ++++ P  F    +D   V  L+ SLYGL QSG+ WN TL+  L   G+ RS  D C+Y S+    E  L+V VYVD L VIA   E++ + K
Sbjct:   94 PETLHEALSAPDKEKWKAAIQSELDTLEASGTWE---LVPRPKERQVVKCKWVFHKKYDENGDLEKYKARLVACGYSQVEGTDYKETFSPVVKLKSIRTLLAIAVERNWKIHQVDITAAYLNGTLKEAVYMEQPQPFGDCKKDE--VCLLKKSLYGLRQSGKEWNLTLDKLLKLQGMTRSKADPCVYVSK----ERRLIVGVYVDGLLVIAEGEEEIADSK 305          
BLAST of mRNA_H-paniculata_contig47646.11819.1 vs. uniprot
Match: A0A5E8B667_9ASCO (Uncharacterized protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8B667_9ASCO)

HSP 1 Score: 158 bits (400), Expect = 7.120e-41
Identity = 90/216 (41.67%), Postives = 132/216 (61.11%), Query Frame = 0
Query:    2 PKSAAEALKGPQAEKWRAAMEEEWGALVYNGTWESEDLGRLPAGLKATHTKWIFKRKLKEDGSVARYKARLVAQGFSPVEVEDFFETSAPVACLSTLRTVFSLASEYDFELEGMDLDAAYLNAPAEEELFVKLPPEFSPFSRDVPFVRRLRNSLYGLTQSGQNWNNTLNGFLVGIGLDRSTTDSCLYSSRDDGGETNLLVAVYVDDLVIAGRREKV 217
            P S  EA+   +AE W  A   E  +L  NGTWE  D   LP G KA ++KW+FK K K DGS+ RYKARLV  GFS VE  D+ ET APV    T+R V ++A+++ F++  MD++ A+LN   +E+++++ P  F    ++   V  LR SLYGL Q+   WN  ++G LV +G  R+ +D  +Y+     G T +++A+YVDDL+I+G   +V
Sbjct: 1288 PSSFEEAMSSEEAEFWLEACVIEMSSLKRNGTWELVD---LPPGRKAINSKWVFKVKRKADGSIERYKARLVCIGFSQVEGIDYTETFAPVVRYETVRIVLAIAAQFGFQVHHMDVETAFLNGDLKEDIYMRQPKGFVVKGQESK-VCHLRKSLYGLKQAPLCWNEKIHGALVKLGFIRNESDYGVYTKGS--GSTMVIIALYVDDLLISGNSSEV 1497          
BLAST of mRNA_H-paniculata_contig47646.11819.1 vs. uniprot
Match: H3H8P6_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H8P6_PHYRM)

HSP 1 Score: 150 bits (379), Expect = 8.010e-41
Identity = 84/217 (38.71%), Postives = 132/217 (60.83%), Query Frame = 0
Query:    8 ALKGPQAEKWRAAMEEEWGALVYNGTWESEDLGRLPAGLKATHTKWIFKRKLKEDGSVARYKARLVAQGFSPVEVEDFFETSAPVACLSTLRTVFSLASEYDFELEGMDLDAAYLNAPAEEELFVKLPPEFSPFSRDVP-FVRRLRNSLYGLTQSGQNWNNTLNGFLVGIGLDRSTTDSCLYSSRDDGGETNLLVAVYVDDLVIAGRREKV-DELKH 222
            A++   A KW+ A + E  +L+ N TW   D+  LP G KA   +W+F+ K  + G + R+KARLVA+GFS     D+ ET APVA  +++R V SLA++Y  +L  MD+  A+LN   +E++++  P  +     D P  V +L+ SLYGL QS + WN T++ F++ +G  +  +D C+Y  RD  G+  + VA+YVDDLV+A   +++ +  KH
Sbjct:   30 AMESTDAVKWKEACDSECDSLLKNDTW---DVVPLPKGRKAIGCRWVFRVKENQAGEIERFKARLVAKGFSQKYDIDYDETFAPVAKFTSIRIVLSLAAKYGLKLHQMDVKTAFLNGVLDEDIYMAQPDGY--VDEDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRD--GQDMIFVALYVDDLVLASSNDELLESTKH 239          
BLAST of mRNA_H-paniculata_contig47646.11819.1 vs. uniprot
Match: A0A182GR37_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GR37_AEDAL)

HSP 1 Score: 152 bits (383), Expect = 1.160e-40
Identity = 85/201 (42.29%), Postives = 122/201 (60.70%), Query Frame = 0
Query:   17 WRAAMEEEWGALVYNGTWESEDLGRLPAGLKATHTKWIFKRKLKEDGSVARYKARLVAQGFSPVEVEDFFETSAPVACLSTLRTVFSLASEYDFELEGMDLDAAYLNAPAEEELFVKLPPEFSPFSRDVPFVRRLRNSLYGLTQSGQNWNNTLNGFLVGIGLDRSTTDSCLYSSRDDGGETNLLVAVYVDDLVIAGRREKV 217
            W+ AM+EE  +LV N  W    L +LP G  A   KWIFK K  ED    RYKARLVA+GF+  +  D+ +T +P+A + TLRTV +LA++  + +  MD+  A+LN    EE+++  P  F    RD   V RL+ SLYGL Q+ ++WN   + F+V +G  RS  D CLY  R   G+T +++ +YVDD++IA   EK+
Sbjct:  110 WKQAMQEEMDSLVSNEKWT---LVKLPEGRNAVTCKWIFKLKHSEDNEAPRYKARLVARGFTQKQGFDYSDTYSPLARMDTLRTVLALANQRGWSVHQMDVKCAFLNGELTEEIYMLQPEGFE--QRDG-LVCRLKRSLYGLKQAARSWNERFHNFVVRLGFVRSRNDLCLY--RRGSGDTQVILVIYVDDVLIASGSEKL 302          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig47646.11819.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6G0WHK2_9STRA7.830e-4539.73Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A182GIT5_AEDAL1.340e-4445.81Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A182GDL1_AEDAL5.140e-4440.09Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3H7D1_PHYRM5.390e-4239.34Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A182G9H3_AEDAL2.680e-4141.67Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3GB80_PHYRM2.760e-4138.86Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6B0V9W6_IXORI4.360e-4140.72Putative polyprotein n=1 Tax=Ixodes ricinus TaxID=... [more]
A0A5E8B667_9ASCO7.120e-4141.67Uncharacterized protein n=1 Tax=Saprochaete ingens... [more]
H3H8P6_PHYRM8.010e-4138.71Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A182GR37_AEDAL1.160e-4042.29Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 39..217
e-value: 2.8E-43
score: 148.3
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 12..207
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 12..207

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig47646contigH-paniculata_contig47646:525..1196 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig47646.11819.1mRNA_H-paniculata_contig47646.11819.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig47646 525..1196 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig47646.11819.1 ID=prot_H-paniculata_contig47646.11819.1|Name=mRNA_H-paniculata_contig47646.11819.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=224bp
QPKSAAEALKGPQAEKWRAAMEEEWGALVYNGTWESEDLGRLPAGLKATH
TKWIFKRKLKEDGSVARYKARLVAQGFSPVEVEDFFETSAPVACLSTLRT
VFSLASEYDFELEGMDLDAAYLNAPAEEELFVKLPPEFSPFSRDVPFVRR
LRNSLYGLTQSGQNWNNTLNGFLVGIGLDRSTTDSCLYSSRDDGGETNLL
VAVYVDDLVIAGRREKVDELKHN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like