prot_H-paniculata_contig4763.11815.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4763.11815.1
Unique Nameprot_H-paniculata_contig4763.11815.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length576
Homology
BLAST of mRNA_H-paniculata_contig4763.11815.1 vs. uniprot
Match: D8LG51_ECTSI (TrmE, organellal GTPase involved in tRNA modification n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG51_ECTSI)

HSP 1 Score: 518 bits (1333), Expect = 1.310e-172
Identity = 295/395 (74.68%), Postives = 321/395 (81.27%), Query Frame = 0
Query:  180 SRQDTIFALATGNSGPAGVAVVRISGTGARGVLEALTAGPPPKNPEVPHDNGAGGNAGHSTGSNLALASREKGGS----LPAPRRAVVRHLYDPATRELLDEALVLWMPGPRSFTGEDTVELHTHGSRAVINGVLDALAGLSRYG----VRMAERGEFTRRAYGNGRMDLTGVEGLADLLAADTAAQRKQALKQMGGALRDMYEAWRMELMACLAHAEAVIDFGDDEEDVGGDAAFAAIQPRVSALAAEIDAHLRDGGRGEIVRSGVRVAIVGPPNAGKSSLLNLLAARPAAIVSPVAGTTRDVVEVQMDIAGLPVTLSDTAGLREATEDEIEKEGMRRARGAVDSAHLAIFVVDSTNARGAGELLKQLREEA-------AAAALVEDERWTTEG 559
            S +DTIFALATGN+GPAGVAVVRISG  +  VL+ALT+     +      + AGG+AG +  +  A+ +    G      PA RRAVVR LYDPAT +LLDEALVLWMPGPRSFTGEDTVELHTHGSRAVINGVLDALAG+        VR+AERGEFT+RAYGNGRMDLTGVEGLADL+AADTAAQRKQALKQMGGALRDMYE WR +L  CLAHAEAVIDFGDDEEDVGGDAAFAA+ PRV  LAAEID HLRDGGRGEIVRSGVRVAIVGPPNAGKSSLLNLLAARPAAIVSPVAGTTRDVVEVQMDIAGLPVTLSDTAGL +AT+DEIE+EGMRRAR AVD+AHLAIFVVD+TN  GA  LL +LREEA       AA A   D+    EG
Sbjct:  193 SSEDTIFALATGNAGPAGVAVVRISGPLSAQVLQALTSAANLSSVTAAEAS-AGGDAGVAASAAPAVVNGGGAGRRLPPFPAARRAVVRRLYDPATGDLLDEALVLWMPGPRSFTGEDTVELHTHGSRAVINGVLDALAGMGAASGMRRVRLAERGEFTQRAYGNGRMDLTGVEGLADLIAADTAAQRKQALKQMGGALRDMYEEWRHQLKGCLAHAEAVIDFGDDEEDVGGDAAFAAMMPRVRGLAAEIDRHLRDGGRGEIVRSGVRVAIVGPPNAGKSSLLNLLAARPAAIVSPVAGTTRDVVEVQMDIAGLPVTLSDTAGLPKATDDEIEREGMRRARSAVDNAHLAIFVVDATNTDGATALLGKLREEAKEAEAEAAATAAQRDDAAEMEG 586          
BLAST of mRNA_H-paniculata_contig4763.11815.1 vs. uniprot
Match: A0A6H5K111_9PHAE (TrmE-type G domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K111_9PHAE)

HSP 1 Score: 509 bits (1312), Expect = 1.170e-171
Identity = 290/383 (75.72%), Postives = 311/383 (81.20%), Query Frame = 0
Query:  180 SRQDTIFALATGNSGPAGVAVVRISGTGARGVLEALTAGPPPKNPEVPHDNGAGGNAGHSTG---------SNLALASREKGGSLPAPRRAVVRHLYDPATRELLDEALVLWMPGPRSFTGEDTVELHTHGSRAVINGVLDALA------GLSRYGVRMAERGEFTRRAYGNGRMDLTGVEGLADLLAADTAAQRKQALKQMGGALRDMYEAWRMELMACLAHAEAVIDFGDDEEDVGGDAAFAAIQPRVSALAAEIDAHLRDGGRGEIVRSGVRVAIVGPPNAGKSSLLNLLAARPAAIVSPVAGTTRDVVEVQMDIAGLPVTLSDTAGLREATEDEIEKEGMRRARGAVDSAHLAIFVVDSTNARGAGELLKQLREEAAAA 547
            S +DTIFALATGN+GPAGVAVVRISG  +  VL+ALT+        +     A  +AG   G               +  +    PA RRAVVR LYDPAT +LLDEALVLWMPGPRSFTGEDTVELHTHGSRAVINGVLDALA      GL R  VR+AERGEFT+RAYGNGRMDLTGVEGLADL+AADTAAQRKQALKQMGGALRDMYE WR +L  CLAHAEAVIDFGDDEEDVGGDAAF+A+ PRV  LAAEID HLRDGGRGEIVRSGVRVAIVGPPNAGKSSLLNLLAARPAAIVSPVAGTTRDVVEVQMDIAGLPVTLSDTAGLREAT+DEIE+EGMRRAR AVD+AHLAIFVVD+TN  GA  LL +LREEA  A
Sbjct:   29 SSEDTIFALATGNAGPAGVAVVRISGPLSAQVLQALTSAT-----TLSSATAAEASAGRDAGVAXXXXXXXXXXXXXAGRRLPPFPAARRAVVRRLYDPATGDLLDEALVLWMPGPRSFTGEDTVELHTHGSRAVINGVLDALAAMGAASGLRR--VRLAERGEFTQRAYGNGRMDLTGVEGLADLVAADTAAQRKQALKQMGGALRDMYEEWRHQLKGCLAHAEAVIDFGDDEEDVGGDAAFSAMMPRVRGLAAEIDRHLRDGGRGEIVRSGVRVAIVGPPNAGKSSLLNLLAARPAAIVSPVAGTTRDVVEVQMDIAGLPVTLSDTAGLREATDDEIEREGMRRARSAVDNAHLAIFVVDATNTDGATALLGKLREEAKEA 404          
BLAST of mRNA_H-paniculata_contig4763.11815.1 vs. uniprot
Match: A0A836CK05_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK05_9STRA)

HSP 1 Score: 398 bits (1023), Expect = 2.750e-130
Identity = 224/361 (62.05%), Postives = 260/361 (72.02%), Query Frame = 0
Query:  183 DTIFALATGNSGPAGVAVVRISGTGARGVLEALTAGPPPKNPEVPHDNGAGGNAGHSTGSNLALASREKGGSLPAPRRAVVRHLYDPATRELLDEALVLWMPGPRSFTGEDTVELHTHGSRAVINGVLDALAGLSRYGVRMAERGEFTRRAYGNGRMDLTGVEGLADLLAADTAAQRKQALKQMGGALRDMYEAWRMELMACLAHAEAVIDFGDDEEDVGGDAAFAAIQPRVSALAAEIDAHLRDGGRGEIVRSGVRVAIVGPPNAGKSSLLNLLAARPAAIVSPVAGTTRDVVEVQMDIAGLPVTLSDTAGLR--EATEDEIEKEGMRRARGAVDSAHLAIFVVDSTNARGAGELLKQLR 541
            DTIFAL++G +G AGVAV+R+SG  A   L  L   P                               +   +P  RRA VR LYDP   +LLDEALVLWMPGPRSFTGEDT ELHTHGSRAV+ GVL AL  +   G+R AERGEFT+RAYGNGRMDLT VEGLADL+AADTA QR+QAL+QMGGAL+D YE+WR EL  CLAH EAVIDFGDDE+DV  + A+AAI+P+VS L  E+  HL D  RGEIVR+GVRVAI GPPNAGKSSLLN+LA RPAAIVSP+AGTTRDVV++Q+DIAGLPV LSDTAGLR  EA  D++E+EG+RRAR AV  + L IFV DS+N       LK L+
Sbjct:    4 DTIFALSSGPAGQAGVAVIRVSGPAAGDALHTLITAP------------------------------GRHAKMPEARRAAVRRLYDPVKGDLLDEALVLWMPGPRSFTGEDTTELHTHGSRAVVGGVLGALGTIP--GLRPAERGEFTQRAYGNGRMDLTEVEGLADLIAADTAEQRRQALRQMGGALKDKYESWREELTKCLAHTEAVIDFGDDEDDVD-EGAYAAIRPKVSGLIQELRVHLADNRRGEIVRNGVRVAIAGPPNAGKSSLLNVLAERPAAIVSPIAGTTRDVVQLQLDIAGLPVVLSDTAGLRAAEAAADDVEREGIRRAREAVVDSQLTIFVWDSSNEAEGAAALKDLQ 331          
BLAST of mRNA_H-paniculata_contig4763.11815.1 vs. uniprot
Match: A0A4D9CTT5_9STRA (TrmE-type G domain-containing protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CTT5_9STRA)

HSP 1 Score: 367 bits (943), Expect = 2.210e-118
Identity = 203/327 (62.08%), Postives = 237/327 (72.48%), Query Frame = 0
Query:  256 PAPRRAVVRHLYDPATRELLDEALVLWMPGPRSFTGEDTVELHTHGSRAVINGVLDALAGLSRYG---VRMAERGEFTRRAYGNGRMDLTGVEGLADLLAADTAAQRKQALKQMGGALRDMYEAWRMELMACLAHAEAVIDFGDDEEDVGGDAAFAAIQPRVSALAAEIDAHLRDGGRGEIVRSGVRVAIVGPPNAGKSSLLNLLAARPAAIVSPVAGTTRDVVEVQMDIAGLPVTLSDTAGLREATEDEIEKEGMRRARGAVDSAHLAIFVVDSTNA---------RGAGELLKQLREEA-----------AAAALVEDERWTTEG 559
            PAPR A +R LY P  +E LD+A+VLW+PGPRSFTGEDTVELH HGSRAV+ GV +AL  L + G   VR+AE GEFT RA+ NGRMDLT VEGLADL+AADTAAQRKQALKQMGGALR  YE WR EL  CLAH EAVIDFGDDE DV  +AA+ AI+PRV  L+ E+  HL DGGRGE++R+G+RVAIVGPPNAGKS++LN LA RPAAIVSP AGTTRDVVEVQ+D+ GLPV +SDTAG+REA  D +E+EG+RRAR A   A L + V+D+             G G  LK    E            A A LV ++R T EG
Sbjct:   13 PAPRMASLRKLYSPVGQEALDQAIVLWLPGPRSFTGEDTVELHCHGSRAVVQGVTEALLALDKGGKARVRLAEPGEFTERAFANGRMDLTEVEGLADLIAADTAAQRKQALKQMGGALRQTYEGWREELKVCLAHTEAVIDFGDDELDVD-EAAYDAIRPRVRRLSEEMRRHLADGGRGEVIRAGIRVAIVGPPNAGKSTMLNTLARRPAAIVSPAAGTTRDVVEVQLDVGGLPVLVSDTAGIREAARDPVEQEGIRRAREAAGRAQLTVLVLDAAEVLGREAFASLAGVGPFLKDAPPEDLETVLRAVGGDAGALLVLNKRDTVEG 338          
BLAST of mRNA_H-paniculata_contig4763.11815.1 vs. uniprot
Match: A0A7S3H4J6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H4J6_9STRA)

HSP 1 Score: 338 bits (867), Expect = 2.350e-108
Identity = 196/337 (58.16%), Postives = 235/337 (69.73%), Query Frame = 0
Query:  183 DTIFALATGNSGPAGVAVVRISGTGARGVLEALTAGPPPKNPEVPHDNGAGGNAGHSTGSNLALASREKGGSLPAPRRAVVRHLYDPATRELLDEALVLWMPGPRSFTGEDTVELHTHGSRAVINGVLDALAGL----SRYGVRMAERGEFTRRAYGNGRMDLTGVEGLADLLAADTAAQRKQALKQMGGALRDMYEAWRMELMACLAHAEAVIDFGDDE-EDVGGDAAFAAIQPRVSALAAEIDAHLRDGGRGEIVRSGVRVAIVGPPNAGKSSLLNLLAARPAAIVSPVAGTTRDVVEVQMDIAGLPVTLSDTAGLREATEDEIEKEGMRRARGA 514
            DTIFAL++G    +GVAVVRISG  +   LE L   P                 G ST S  A          P PR A ++ LY P T ++LD++L+LW PGPRSFTGED VELH HGSRAVI GV +AL  L    S   +R A  GEFTRRA+ NG+MDLT VEGL+DLL A+T+ QRKQALKQM G LR  YEAWR  LM+CLAH EAVIDFGDD+ ED   DAA  A+QPRV  L +E+  HL+DG RGE+VR G+ +A+ GPPNAGKSSL+N LA RPAAIVSP+AGTTRD+VEV++++AG+P  +SDTAGLRE ++D IE EGMRRAR A
Sbjct:   58 DTIFALSSGPIAKSGVAVVRISGPSSLYCLERLAVKP-----------------GAST-SPFA----------PKPREATLKALYSPVTDDVLDQSLILWFPGPRSFTGEDVVELHVHGSRAVIKGVFEALEHLDDPLSGRAIRPAAPGEFTRRAFDNGKMDLTEVEGLSDLLDAETSEQRKQALKQMEGHLRKQYEAWRDVLMSCLAHTEAVIDFGDDDREDDVSDAALHALQPRVRTLLSELQRHLQDGRRGELVREGIHIALAGPPNAGKSSLMNALARRPAAIVSPIAGTTRDIVEVRLELAGVPCIVSDTAGLREHSQDVIELEGMRRAREA 366          
BLAST of mRNA_H-paniculata_contig4763.11815.1 vs. uniprot
Match: A0A2V3IXG2_9FLOR (tRNA modification GTPase GTPBP3, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXG2_9FLOR)

HSP 1 Score: 327 bits (839), Expect = 1.880e-101
Identity = 195/349 (55.87%), Postives = 234/349 (67.05%), Query Frame = 0
Query:  182 QDTIFALATGNSGPAGVAVVRISGTGARGVLEALTAGPPPKNPEVPHDNGAGGNAGHSTGSNLALASREKGGSLPAPRRAVVRHLYDPATRELLDEALVLWMPGPRSFTGEDTVELHTHGSRAVINGVLDALAGLSRYG--VRMAERGEFTRRAYGNGRMDLTGVEGLADLLAADTAAQRKQALKQMGGALRDMYEAWRMELMACLAHAEAVIDFGDDEEDVGGDAAFAAIQPRVSALAAEIDAHLRDGGRGEIVRSGVRVAIVGPPNAGKSSLLNLLAARPAAIVSPVAGTTRDVVEVQMDIAGLPVTLSDTAGLREATEDEIEKEGMRRARGAVDSAHLAIFVVDST 528
            +DTIFAL++G    AGVAV+R+SG  A   L  ++A                             ++R+K   LP PR A +R LY P + ELLDEALVL+ PGP SFTGED VEL  HGSRAVI+ V++ALA  +     +R AERGEFTRRA+ NGR+DLT VEGLADL+AA+TA QRKQAL  + G +++  E WR E+  CLAH EAVIDFGDD +D      F  I PRV AL A+I AHL D  RGEI+R G RVAIVG PNAGKS+LLN LA RPAAIVSP AGTTRDVVEVQ+D+ GL V +SDTAGLR++T D IE EG+RRAR A   A + + V D T
Sbjct:   79 EDTIFALSSGAGVTAGVAVIRVSGPHAADCLLKISA----------------------------PSTRQK---LPRPRYAALRKLYHPLSEELLDEALVLFFPGPNSFTGEDVVELQVHGSRAVISAVVNALADCTDPDTMIRPAERGEFTRRAFENGRLDLTAVEGLADLIAAETAMQRKQALWHLSGHVKETLEEWRTEIKTCLAHVEAVIDFGDDVDDQ----VFEDIIPRVQALRAQIKAHLDDAHRGEIIRGGARVAIVGKPNAGKSTLLNALAKRPAAIVSPHAGTTRDVVEVQLDLNGLAVVVSDTAGLRDSTNDPIEIEGIRRAREAAARADITVLVHDVT 392          
BLAST of mRNA_H-paniculata_contig4763.11815.1 vs. uniprot
Match: W2R133_PHYPN (tRNA modification GTPase TrmE n=13 Tax=Phytophthora TaxID=4783 RepID=W2R133_PHYPN)

HSP 1 Score: 321 bits (823), Expect = 1.090e-99
Identity = 201/373 (53.89%), Postives = 246/373 (65.95%), Query Frame = 0
Query:  183 DTIFALATGNSGPAGVAVVRISGTGARGVLEALTAGPPPKNPEVPHDNGAGGNAGHSTGSNLALASREKGGSLPAPRRAVVRHLYDPATRELLDEALVLWMPGPRSFTGEDTVELHTHGSRAVINGVLDALAGLSRYGVRMAERGEFTRRAYGNGRMDLTGVEGLADLLAADTAAQRKQALKQMGGALRDMYEAWRMELMACLAHAEAVIDFGDDEEDVGGDAAFAAIQPRVSALAAEIDAHLRDGGRGEIVRSGVRVAIVGPPNAGKSSLLNLLAARPAAIVSPVAGTTRDVVEVQMDIAGLPVTLSDTAGLREATEDEIEKEGMRRARGAVDSAHLAIFVVDSTNARG--AGELLKQLREEAAAAALVEDE 553
            DTI+AL++   G AGVAV+RISG  A   L+ L                     G ST             +LP PR A +R LY P T+E LD+ALVL  P P SFTGED VELHTHGS AV++GVL+AL+ +     R AE GEFT RA+ N ++DL  VEGLADLL+A+T AQR QAL+Q+ G + ++YE WR  L+ CLA+ EA+IDFGDDE+DV  DAA+ A   RV ALA  I  HL DG RGEI+RSGV+VAIVGPPNAGKSSLLN+LA RPAAIVS +AGTTRDVV+V ++IAG PV +SDTAGLRE TED IEKEG+ RA+     A + + ++D  NAR   +GE    LR  A A     D+
Sbjct:   66 DTIYALSSA-PGKAGVAVIRISGDQADSCLQQL---------------------GKST-------------ALPKPRVAALRKLYHPKTKEHLDDALVLRFPHPNSFTGEDIVELHTHGSVAVVSGVLEALSHVPH--CRAAEPGEFTERAFDNNKIDLVQVEGLADLLSAETEAQRSQALRQLSGDIGEIYEGWRDSLVKCLAYTEAMIDFGDDEDDVT-DAAYEAAVDRVRALADSIRGHLADGRRGEILRSGVQVAIVGPPNAGKSSLLNILARRPAAIVSSIAGTTRDVVQVPLNIAGYPVIVSDTAGLRE-TEDIIEKEGVLRAQQCASDADICVVMMDIQNARQLHSGEYQSYLRHGAFAVLNKSDQ 399          
BLAST of mRNA_H-paniculata_contig4763.11815.1 vs. uniprot
Match: A0A0M0JVR3_9EUKA (tRNA modification gtpase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JVR3_9EUKA)

HSP 1 Score: 320 bits (819), Expect = 1.260e-99
Identity = 171/284 (60.21%), Postives = 210/284 (73.94%), Query Frame = 0
Query:  251 KGGSLPAPRRAVVRHLYDPATRE-----LLDEALVLWMPGPRSFTGEDTVELHTHGSRAVINGVLDALAGLSRYGVRMAERGEFTRRAYGNGRMDLTGVEGLADLLAADTAAQRKQALKQMGGALRDMYEAWRMELMACLAHAEAVIDFGDDEEDVGGDAAFAAIQPRVSALAAEIDAHLRDGGRGEIVRSGVRVAIVGPPNAGKSSLLNLLAARPAAIVSPVAGTTRDVVEVQMDIAGLPVTLSDTAGLREATEDEIEKEGMRRARGAVDSAHLAIFVVDSTN 529
            + G  P PR+AV+R L+ P   E     L+DE L LW P P SFTGEDTVELHTHGSRAV+   L+AL  L   G+RMAE GEFTR+A+ NGRM+LT VEGLADL+ ADT  QRKQAL+ MGGA R   E WR EL++ LAH EA+IDFG+D +DV  DA   A+  +V  L  E++  L DGGRGE+VR GVRVAI+GPPNAGKSSLLN+LA RPAAIVSP+AGTTRDVV+V + + GLPV LSDTAGLRE+T+D IE++G+ R  G    A + ++V D+T+
Sbjct:    5 RNGETPEPRKAVLRKLWAPEDDEGKRGGLIDEVLALWFPAPNSFTGEDTVELHTHGSRAVVAATLEALGRLE--GLRMAEPGEFTRQAFANGRMELTQVEGLADLINADTEEQRKQALRNMGGAQRSKLEGWRQELLSALAHTEALIDFGEDADDVTADALRGAVT-KVRVLRREVENQLSDGGRGEVVREGVRVAILGPPNAGKSSLLNMLAQRPAAIVSPIAGTTRDVVQVTLQLGGLPVLLSDTAGLRESTDDPIEQQGILRTLGEARRAQVQLWVYDATD 285          
BLAST of mRNA_H-paniculata_contig4763.11815.1 vs. uniprot
Match: A0A8J5XZ82_DIALT (TrmE-type G domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XZ82_DIALT)

HSP 1 Score: 321 bits (822), Expect = 4.490e-99
Identity = 200/391 (51.15%), Postives = 246/391 (62.92%), Query Frame = 0
Query:  179 PSRQDTIFALATGNSGPAGVAVVRISGTGARGVLEALTAGPPPKNPEVPHDNGAGGNAGHSTGSNLALASREKGGSLPAPRRAVVRHLYDPATRELLDEALVLWMPGPRSFTGEDTVELHTHGSRAVINGVLDALAGLSRYGVRMAERGEFTRRAYGNGRMDLTGVEGLADLLAADTAAQRKQALKQMGGALRDMYEAWRMELMACLAHAEAVIDFGDDEEDVGGDAAFAAIQPRVSALAAEIDAHLRDGGRGEIVRSGVRVAIVGPPNAGKSSLLNLLAARPAAIVSPVAGTTRDVVEVQMDIAGLPVTLSDTAGLREATE-DEIEKEGMRRARGAVDSAHLAIFVVDSTNARGAGELLKQLREEAAAAALVEDERWTTEGGDRWGGISG 568
            P  +DTIFA+++G    AGVAV+RISG GAR  L+ +                            +A    +   +  APR A +  L  P + E LD ALVLW P PRSFTGED  ELH HG RAV+  VL AL  L   G R+AERGEFTRRA+GNGRMDLT VEGL+DLLAA+T AQR+QAL QMGGA R  ++ WR +++ CLAH EAVIDFG+D +D+G D     + PRV+ LAA++   L D  RGE++R G RV IVG PNAGKSSLLN LA RPAAIV+P+AGTTRDV+E+++ + G P+ L DTAGLR   E DEIE EGMRRAR  +  A + + V D +    AG  +   REE AA  L+  E    EG D  G  SG
Sbjct:   63 PEARDTIFAVSSGAGVRAGVAVIRISGAGARIALQTM----------------------------IARGRLDPSLAWLAPRMATLAKLLAPGSDERLDSALVLWFPAPRSFTGEDVAELHVHGGRAVVAAVLAALGALP--GHRLAERGEFTRRAFGNGRMDLTEVEGLSDLLAANTDAQRRQALAQMGGAARARFDGWRAQILDCLAHTEAVIDFGEDADDLGSDV-LRVVSPRVAELAAQMTRALADARRGELLRDGPRVVIVGAPNAGKSSLLNRLAQRPAAIVTPIAGTTRDVLELELQLGGFPLRLCDTAGLRPRDEADEIEVEGMRRARALLADAPMRLVVADVS----AG--VPPSREELAA--LLRGE----EGADAAGEASG 410          
BLAST of mRNA_H-paniculata_contig4763.11815.1 vs. uniprot
Match: A0A7S4B1K1_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B1K1_CHRCT)

HSP 1 Score: 318 bits (814), Expect = 5.240e-98
Identity = 195/386 (50.52%), Postives = 241/386 (62.44%), Query Frame = 0
Query:  183 DTIFALATGNSGPAGVAVVRISGTGARGVLEALTAGPPPKNPEVPHDNGAGGNAGHSTGSNLALASREKGGSLPAPRRAVVRHLYDPATR--------------ELLDEALVLWMPGPRSFTGEDTVELHTHGSRAVINGVLDALAGLSRYGVRMAERGEFTRRAYGNGRMDLTGVEGLADLLAADTAAQRKQALKQMGGALRDMYEAWRMELMACLAHAEAVIDFGDDEEDVGGDAAFAAIQPRVSALAAEIDAHLRDGGRGEIVRSGVRVAIVGPPNAGKSSLLNLLAARPAAIVSPVAGTTRDVVEVQMDIAGLPVTLSDTAGLREATEDEIEKEGMRRARGAVDSAHLAIFVVDSTNARGAGELLKQLREEAAAAALVEDER 554
            +TIFAL++G  G AGV+V+RISG  AR VL  +  G                              R+    LP PR+AV+R L  P+                EL+D+ALVLW PGPRSFTGED VELHTHGSRAV+   L AL  +   G+R+AE GEFTR+A+ NGRM LT VEGL DL+ +DT  QRKQAL QM G  R ++E WR  L+  LAH EA+IDFG+D +DV  +AA +    RV +L AE+ A LRDG RGE VR GVR+AI+GPPNAGKSSLLN LAAR AAIVSP AGTTRDVV + +++ GLPV +SDTAGLR  T DEIE++GM RA      AHL ++V D+     + E L+     A A A  E ++
Sbjct:   64 ETIFALSSGG-GRAGVSVIRISGPQAREVLLQMAPG------------------------------RQGAAELPPPRQAVLRRLRQPSEHGGGCGDRGGEGPPAELIDQALVLWFPGPRSFTGEDVVELHTHGSRAVVAATLGALNSIR--GLRLAEPGEFTRQAFSNGRMSLTEVEGLGDLINSDTEEQRKQALAQMEGVQRRVFEGWRETLLGSLAHTEALIDFGEDADDVT-EAALSGAVSRVRSLRAEMAARLRDGERGEAVRDGVRLAILGPPNAGKSSLLNALAARDAAIVSPTAGTTRDVVSLTLELGGLPVVVSDTAGLRAETADEIERQGMARAAKEAARAHLQLWVYDALAPPQSAEQLEAALASARAGAEQEPQQ 415          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4763.11815.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LG51_ECTSI1.310e-17274.68TrmE, organellal GTPase involved in tRNA modificat... [more]
A0A6H5K111_9PHAE1.170e-17175.72TrmE-type G domain-containing protein n=1 Tax=Ecto... [more]
A0A836CK05_9STRA2.750e-13062.05Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9CTT5_9STRA2.210e-11862.08TrmE-type G domain-containing protein n=4 Tax=Mono... [more]
A0A7S3H4J6_9STRA2.350e-10858.16Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
A0A2V3IXG2_9FLOR1.880e-10155.87tRNA modification GTPase GTPBP3, mitochondrial n=1... [more]
W2R133_PHYPN1.090e-9953.89tRNA modification GTPase TrmE n=13 Tax=Phytophthor... [more]
A0A0M0JVR3_9EUKA1.260e-9960.21tRNA modification gtpase n=1 Tax=Chrysochromulina ... [more]
A0A8J5XZ82_DIALT4.490e-9951.15TrmE-type G domain-containing protein n=1 Tax=Diac... [more]
A0A7S4B1K1_CHRCT5.240e-9850.52Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027368tRNA modification GTPase MnmE domain 2GENE3D1.20.120.430coord: 339..505
e-value: 3.8E-29
score: 104.4
IPR027266GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1GENE3D3.30.1360.120coord: 179..338
e-value: 3.3E-37
score: 129.1
IPR025867MnmE, helical domainPFAMPF12631MnmE_helicalcoord: 341..438
e-value: 2.6E-23
score: 83.7
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 438..532
e-value: 1.8E-15
score: 55.1
IPR018948GTP-binding protein TrmE, N-terminalPFAMPF10396TrmE_Ncoord: 184..338
e-value: 7.6E-34
score: 116.5
IPR006073GTP binding domainPFAMPF01926MMR_HSR1coord: 439..542
e-value: 3.3E-21
score: 75.5
NoneNo IPR availablePANTHERPTHR42714:SF2TRNA MODIFICATION GTPASE GTPBP3, MITOCHONDRIALcoord: 179..531
NoneNo IPR availablePANTHERPTHR42714FAMILY NOT NAMEDcoord: 179..531
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..41
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 42..575
NoneNo IPR availableTMHMMTMhelixcoord: 20..42
IPR004520tRNA modification GTPase MnmEHAMAPMF_00379GTPase_MnmEcoord: 183..575
score: 22.982
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 288..529

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4763contigH-paniculata_contig4763:5578..12224 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4763.11815.1mRNA_H-paniculata_contig4763.11815.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4763 5578..12224 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4763.11815.1 ID=prot_H-paniculata_contig4763.11815.1|Name=mRNA_H-paniculata_contig4763.11815.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=576bp
ERSRGGGDCCFPLGSDMCHCGLLPPLLLTPILLLLVVFGVVDSFVVPPTF
TTRAQPVQPLETVTATSMLSLSSSRCSSSSLLLAASRPVAHHCCASRALR
WVAVPLTPLHFLSGQHCSSRRNLTGVFANTTNHPHGSRIVTSRYVRVPGL
QARNGSNSSPLPSPPPPHHHHPSPSPSPPSRQDTIFALATGNSGPAGVAV
VRISGTGARGVLEALTAGPPPKNPEVPHDNGAGGNAGHSTGSNLALASRE
KGGSLPAPRRAVVRHLYDPATRELLDEALVLWMPGPRSFTGEDTVELHTH
GSRAVINGVLDALAGLSRYGVRMAERGEFTRRAYGNGRMDLTGVEGLADL
LAADTAAQRKQALKQMGGALRDMYEAWRMELMACLAHAEAVIDFGDDEED
VGGDAAFAAIQPRVSALAAEIDAHLRDGGRGEIVRSGVRVAIVGPPNAGK
SSLLNLLAARPAAIVSPVAGTTRDVVEVQMDIAGLPVTLSDTAGLREATE
DEIEKEGMRRARGAVDSAHLAIFVVDSTNARGAGELLKQLREEAAAAALV
EDERWTTEGGDRWGGISGMYPYGCT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027368MnmE_dom2
IPR027266TrmE/GcvT_dom1
IPR025867MnmE_helical
IPR005225Small_GTP-bd_dom
IPR018948GTP-bd_TrmE_N
IPR006073GTP_binding_domain
IPR004520GTPase_MnmE
IPR027417P-loop_NTPase