prot_H-paniculata_contig47605.11812.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig47605.11812.1
Unique Nameprot_H-paniculata_contig47605.11812.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length41
Homology
[Close]
BLAST of mRNA_H-paniculata_contig47605.11812.1 vs. uniprot
Match: A0A6H5JI18_9PHAE (PAO protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI18_9PHAE)

HSP 1 Score: 53.9 bits (128), Expect = 2.970e-7
Identity = 25/34 (73.53%), Postives = 27/34 (79.41%), Query Frame = 0 
Query:    7 QDGGAIKFVPPLPSTKLDAIRRLGFGTADKVFLR 40
            QDG A+ F PPLP  KL AIRRLGFGTADK F+R
Sbjct:  499 QDGMALTFSPPLPQAKLAAIRRLGFGTADKFFVR 532
[Close]
BLAST of mRNA_H-paniculata_contig47605.11812.1 vs. uniprot
Match: D7G835_ECTSI (Similar to peroxisomal n1-acetyl-spermine/spermidine oxidase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G835_ECTSI)

HSP 1 Score: 51.6 bits (122), Expect = 1.950e-6
Identity = 23/34 (67.65%), Postives = 27/34 (79.41%), Query Frame = 0 
Query:    7 QDGGAIKFVPPLPSTKLDAIRRLGFGTADKVFLR 40
            +DG A+ F PPLP  KL AIRR+GFGTADK F+R
Sbjct:  456 KDGTALTFSPPLPQAKLAAIRRVGFGTADKFFVR 489
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig47605.11812.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JI18_9PHAE2.970e-773.53PAO protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta... [more]
D7G835_ECTSI1.950e-667.65Similar to peroxisomal n1-acetyl-spermine/spermidi... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002937Amine oxidasePFAMPF01593Amino_oxidasecoord: 11..40
e-value: 7.9E-6
score: 25.4
NoneNo IPR availableGENE3D3.90.660.10coord: 4..40
e-value: 6.0E-9
score: 37.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig47605contigH-paniculata_contig47605:251..373 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig47605.11812.1mRNA_H-paniculata_contig47605.11812.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig47605 251..373 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig47605.11812.1 ID=prot_H-paniculata_contig47605.11812.1|Name=mRNA_H-paniculata_contig47605.11812.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=41bp
VLVSGRQDGGAIKFVPPLPSTKLDAIRRLGFGTADKVFLR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002937Amino_oxidase