prot_H-paniculata_contig476.11810.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig476.11810.1
Unique Nameprot_H-paniculata_contig476.11810.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length1378
Homology
BLAST of mRNA_H-paniculata_contig476.11810.1 vs. uniprot
Match: D8LAZ1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAZ1_ECTSI)

HSP 1 Score: 882 bits (2280), Expect = 1.270e-289
Identity = 657/1455 (45.15%), Postives = 820/1455 (56.36%), Query Frame = 0
Query:    1 MGGRFMPAYYHELVGQSGDR-----GPDGFDVSPDEREAWASSSAPSLDPVEVELFAFKSSWDVVKACDRYFARALNP--NGLPPPARELVAIRQARQETSRHLSELLEFAQTRLLEYARLVAEEGILRAMDAGVGNRGVATEGSLLSSCVWELQEQGYLASQRNWIPQQETEKSQTPNVRNPAAGGAAGLGRSGRMRVDGDVIEVETLSGSFFWDPDEEGEVFVPTNNGTA--INPIKILTGGDGVPSPRRSMQASSLMADFDDEDSDETEXXXXXXXXXXXXXXXXXXXXXXXXXXARRSFASLDSSSGADXXXXXXXXXARRGDGGWVGRGRGGGIRRQLDSPGMLEDAYLQLTHSLAQHNQRAGRVRAAARCWGKRTELLLERGEMGIAQARLASLADLYQTEGWLPQAFWALHRLARCRRAIAVSSSPEGKDRAATPESRIYVSTVMRMAALLKDPQVRLEGGATAVDRATAGLLRDVHELT---AGNPAPFLSTSS--------VAEEKLLPFGADVPGADGDRGHVYQLQCFANVKISVLVSGVGGSG-------------GGEERPRLRSPATLPTVHVGDTLRVSCVLTSHLPEAVTLDGLELEMVYEG----RYMGGRE---------DENATHRRSMRTPALPGGRRSLRRLESVKTMVITEDDVASPPSPTSAAPTPAKFRPPPPVVTATNALTDSLADMDGVVGPAAIAAATAADREVMAGQQISKVR---SQSLSPRSNASAAKNVFGSVQGTGSGVDIPAVFPRHGRSRSPVRHSSQGESPTSSSPGPPTSPKSHLSRQRALFSAKVDGPTQLLPGETQVIFSLRPTMSGIVTASKISASWERVRLVGLLPPGGRGAGGNGGGPASVVTQPLTLETRPPPPTPSAVIRPFRPRTTLEILPPAFLPAGGGGWIRVVVVTGPDTIRGARLRLGVGVGLAWGAVALAKISLHPVEDRGDXXXXXXXXVR----------------ETRALATAKEDPAEIAVELPDEIKAGWRVDVFLRVLSTAPLAPDQFDTRVSSLFTVPAPKPCIVKAEMQAWHSR--DAAPGAPAKASLSTSDAADEAGVECRIRARAGVLVRLPFEMRTTVMPRPGRVVLAEASLVCHAPVALALRSCEIAELEVGTTVIADPNTFLSGEILPPGQPLRLMACLRRGGGEVVSSSALSSVGDSLVAYSRSSSDSDCSAGFPAPPALALLRLRYEIHR--GDDGDGGEKKAAAAEGSNAREREEFIFDVAIPEPPERALDAARSQFISSTADLGSGS-RAQVTLTTFVEPCDVGVARGKRVVVGDGSLLELRLAEPRAFDFGVEVGLEASDGAE----ASAAQLVAFQVVASPSDWMISGLVTGSTKLGAEVGR-HMLCKVHLVPIRGGLLSLPQLKVTAD---ASDGQDNIVVWTPEQRKVLVLPPGDATSMCRARTP 1377
            MGGRFMPAYYHELVGQ+ D         G D      E   SSS+ +LDP EVELFA KSSWDVVKACDR FARALNP  +G+ PP RE+ AIR++R ETSR L ELL+FAQ ++LEYARLV + G     D G G  G      L+ SCVWELQE+G+L SQRNWIP  E   +    +R         LGR+GRMRV+G V++V+ +SG +FWD DEEGEVF+P  +      NP+K +TGGDGVPSP++S +AS+ + DFDD+       XXXXXXXXXXXXXXXXXXXXXXXXXA    A+        XXXXXX        G W+           LD P  LEDAYLQLTHSL QHNQRAGR+RAAARCWG+R ELLLERGE+G+AQARL++LADLYQ EGW PQAFWALHRLARCRR++A+S   E   +A       YVSTVMR+AA+LKDP+VR +GG  AVDRA A LLRD   L    AG+P    S  S        +A      F  D     G +   Y+LQCFA+V +SV V   GG G                       P  L  VHVGD L VSCVLTSHLP+AVTLD L LEM  EG       GG+E          +  ++RRS      P   + LRRLESV+T V  EDD++   +P   AP   K + PPP   +  A     +  DG  G           +  + G Q+  +R   SQSLSPR +A            T S  D+     R    R P  ++S                                 P +LLPG+ +V+F+LRPT++G++TAS++SA+W  V LV +L  GGRG G +G      VT P      P PP PSAV+RPFRP+  L+++PP+FLP G   W++V V  GPDT+RG+RLR+ +G GLAWG    +++    +   G XXXXXXXX                  E  AL+   E+  ++ V L + ++ G+  +V LRV STA  +P        ++    AP+  +V+AE++AWHSR  DAA             AAD+AGVECR  ARA ++ RLPFE R  V  R   VV A+ +LVC APVAL+LRSCE++ LE G  V++DPN FL+GE LPPGQPLRL ACLRR                                G P    LA+ RLRY I    G+ GD G+ +            E F+FDV IP P +              +   +GS RAQ  LTT V PCD G A       G G +  L+LAEPRAF+FGV V  EAS G E     +A   V +QVVASPSDWM+ GL+ GS KL  + G   +LC+VHLVPIRGGL+ LP+L V  +   A+ G+  + VW P+ RKVLVLPPGD+ S+C+AR P
Sbjct:  544 MGGRFMPAYYHELVGQAADLQEGGGXXXGGDFDEGASEGGKSSSSTALDPAEVELFALKSSWDVVKACDRDFARALNPGASGVEPPPREVSAIRKSRVETSRVLGELLDFAQKKVLEYARLVGQRG-RDGDDFGDGGEG------LMGSCVWELQERGFLPSQRNWIPLDEEVAAAAAALRE----NEEALGRTGRMRVEGGVVDVQAVSGEYFWDYDEEGEVFIPPQDPGVKRFNPMKAITGGDGVPSPQKSRRASNRITDFDDDXX-----XXXXXXXXXXXXXXXXXXXXXXXXXALSKLAAEXXXXXXXXXXXXXTAGVGSDVGLWL-----------LDRPEALEDAYLQLTHSLGQHNQRAGRIRAAARCWGRRVELLLERGEVGVAQARLSNLADLYQAEGWTPQAFWALHRLARCRRSLALSDRNEA-GQATDAGDASYVSTVMRLAAVLKDPRVRSDGGKAAVDRAAAALLRDARSLAGEPAGSPGRGFSPPSPSADNNAGIASASSHFFSGDSTNDVGGK-RAYRLQCFADVSLSV-VEKEGGVGEXXXXXXXXXXXXXXXXXXXXXXPDPLSAVHVGDRLLVSCVLTSHLPQAVTLDSLSLEMTLEGGXXXXXRGGQEASAGGRSGVGDRFSNRRSS-----PRRSKVLRRLESVRTAVAAEDDLSPSRTPAPGAP---KLQSPPPGTASNGAAALLASGADGSAGQG---------KGKVPGFQVPPIRTERSQSLSPRLSA------------TSSASDL-----RESLMRVPAGNTSSR-------------------------------PVELLPGDNEVVFTLRPTVAGVITASRVSAAWGGVTLVQVLSGGGRGRGPSG------VTLPSAWLGAPRPP-PSAVVRPFRPQAVLKVVPPSFLPLGNEVWLKVAVTAGPDTLRGSRLRVTMGRGLAWGDAEASRVRWRRLSGGGGXXXXXXXXXXXXXSEGADDGCGPAEAEGPALSRPGEEATDMLVALEEVLRPGYVAEVSLRVRSTAEASPPAGGGPGPAV----APRSHVVRAELEAWHSRSPDAA-------------AADDAGVECRTYARAAIVPRLPFEARVAVTARQAGVVFAQTALVCTAPVALSLRSCELSRLEPGAEVLSDPNGFLNGESLPPGQPLRLAACLRRPSAATXXXXXXXXXXXXXSRGGGEERKGSVGGGVP----LAVHRLRYSIGTVAGESGDSGQAE------------EIFVFDVCIPSPADGXXXXXXXXXXXXXSPGAAGSGRAQRCLTTAVRPCDDGGAED-----GKGGVTRLKLAEPRAFEFGV-VDSEASGGGEDGTGGTAPPTVTYQVVASPSDWMVGGLIRGSAKLDKKGGGLQVLCRVHLVPIRGGLVELPRLDVVVERGRAAPGE--VEVWNPDLRKVLVLPPGDSASVCQARAP 1855          
BLAST of mRNA_H-paniculata_contig476.11810.1 vs. uniprot
Match: A0A7S2KBE6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KBE6_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 9.430e-8
Identity = 67/264 (25.38%), Postives = 107/264 (40.53%), Query Frame = 0
Query:  330 IRRQLDSPGMLEDAYLQLTHSLAQHNQRAGRVRAAARCWGKRTELLLERGEMGIAQARLASLADLYQTEGWLPQAFWALHRLARCRRAIAVSSSPEGKDRAATPESRIYVSTVMRMAALLKDPQVRLEGGATAVDRATAGLLRDVHELTAGNPAPFLSTSSVAEEKLLPFGADVPGADGDRGHVYQLQCFANVKISVLVSGVGGSGGGEERPRLRSPATLPTVHVGDTLRVSCVLTSHLPEAVTLDGLELEMV----YEGRYMG 589
            +R    +    ED YL+L  +    N+RAGR R A+R    R E+L+ RGE  +A   L++       + W    +W + RLA C+R                 +   Y+ T      L +    RL    +   + TA L ++  E         ++ ++VAE +   F                   F   ++S+     G S   +  P LR   +    +VGD LR S  + SHLP A++++G+ L +V    YE  Y G
Sbjct:  518 VRNAFSNSSTYEDTYLELAKAAVYINRRAGRFRFASRLEDHRAEVLISRGEYNLAADVLSNNVGACARDQWNRAHYWRIFRLACCQRVSG--------------DVLAYLET------LTQSFNPRLS---SVAPKKTASLFQNDLEA-------LITDAAVAEPRWGAFP------------------FLETELSIESETAGKSS--QPLPFLRRKLSKYLTYVGDELRFSLSINSHLPRAISVNGIRLYLVTLASYEQVYRG 731          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig476.11810.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LAZ1_ECTSI1.270e-28945.15Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2KBE6_9STRA9.430e-825.38Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022233TRAPP II complex, TRAPPC10PFAMPF12584TRAPPC10coord: 1283..1345
e-value: 3.1E-6
score: 27.0
NoneNo IPR availablePANTHERPTHR13251EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1/TMEM1coord: 41..1367

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig476contigH-paniculata_contig476:26054..36581 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig476.11810.1mRNA_H-paniculata_contig476.11810.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig476 25526..36584 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig476.11810.1 ID=prot_H-paniculata_contig476.11810.1|Name=mRNA_H-paniculata_contig476.11810.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1378bp
MGGRFMPAYYHELVGQSGDRGPDGFDVSPDEREAWASSSAPSLDPVEVEL
FAFKSSWDVVKACDRYFARALNPNGLPPPARELVAIRQARQETSRHLSEL
LEFAQTRLLEYARLVAEEGILRAMDAGVGNRGVATEGSLLSSCVWELQEQ
GYLASQRNWIPQQETEKSQTPNVRNPAAGGAAGLGRSGRMRVDGDVIEVE
TLSGSFFWDPDEEGEVFVPTNNGTAINPIKILTGGDGVPSPRRSMQASSL
MADFDDEDSDETEGSGGSSSTAASSSSSAAAAAAAAAMRARRSFASLDSS
SGADRENTGGGGGARRGDGGWVGRGRGGGIRRQLDSPGMLEDAYLQLTHS
LAQHNQRAGRVRAAARCWGKRTELLLERGEMGIAQARLASLADLYQTEGW
LPQAFWALHRLARCRRAIAVSSSPEGKDRAATPESRIYVSTVMRMAALLK
DPQVRLEGGATAVDRATAGLLRDVHELTAGNPAPFLSTSSVAEEKLLPFG
ADVPGADGDRGHVYQLQCFANVKISVLVSGVGGSGGGEERPRLRSPATLP
TVHVGDTLRVSCVLTSHLPEAVTLDGLELEMVYEGRYMGGREDENATHRR
SMRTPALPGGRRSLRRLESVKTMVITEDDVASPPSPTSAAPTPAKFRPPP
PVVTATNALTDSLADMDGVVGPAAIAAATAADREVMAGQQISKVRSQSLS
PRSNASAAKNVFGSVQGTGSGVDIPAVFPRHGRSRSPVRHSSQGESPTSS
SPGPPTSPKSHLSRQRALFSAKVDGPTQLLPGETQVIFSLRPTMSGIVTA
SKISASWERVRLVGLLPPGGRGAGGNGGGPASVVTQPLTLETRPPPPTPS
AVIRPFRPRTTLEILPPAFLPAGGGGWIRVVVVTGPDTIRGARLRLGVGV
GLAWGAVALAKISLHPVEDRGDGDGGGDGDVRETRALATAKEDPAEIAVE
LPDEIKAGWRVDVFLRVLSTAPLAPDQFDTRVSSLFTVPAPKPCIVKAEM
QAWHSRDAAPGAPAKASLSTSDAADEAGVECRIRARAGVLVRLPFEMRTT
VMPRPGRVVLAEASLVCHAPVALALRSCEIAELEVGTTVIADPNTFLSGE
ILPPGQPLRLMACLRRGGGEVVSSSALSSVGDSLVAYSRSSSDSDCSAGF
PAPPALALLRLRYEIHRGDDGDGGEKKAAAAEGSNAREREEFIFDVAIPE
PPERALDAARSQFISSTADLGSGSRAQVTLTTFVEPCDVGVARGKRVVVG
DGSLLELRLAEPRAFDFGVEVGLEASDGAEASAAQLVAFQVVASPSDWMI
SGLVTGSTKLGAEVGRHMLCKVHLVPIRGGLLSLPQLKVTADASDGQDNI
VVWTPEQRKVLVLPPGDATSMCRARTP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022233TRAPP_II_complex_TRAPPC10