prot_H-paniculata_contig47591.11808.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig47591.11808.1
Unique Nameprot_H-paniculata_contig47591.11808.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length126
Homology
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BLAST of mRNA_H-paniculata_contig47591.11808.1 vs. uniprot
Match: A0A6H5JZQ5_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ5_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 5.190e-7
Identity = 35/111 (31.53%), Postives = 55/111 (49.55%), Query Frame = 0 
Query:    1 MWDSGCVDPSFFKDARVMFTPPFHSGKRLDMLRLVAGNDNRLSTNAEVSVPAPLSDMADRPAETWAEIRARTTTAGQSEMMRRKDTVKAREAKRLRFSGEPANHRFSKRQR 111
            +WD    DPS F+DA V+ TPPF++GK L+ LRL A +   LS   +   P   S++  +    WA+I+ R   A +    R +      +    RF GE +    +++ R
Sbjct:   30 VWDDDSADPSPFRDAAVLLTPPFNTGKYLEALRLSAADAEYLSIGKKGLAPTMDSEVTAKLDGCWADIKRRAWEAARERNRRSESLDDGVQPLHKRFRGESSTSSATRKSR 140
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig47591.11808.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JZQ5_9PHAE5.190e-731.53Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig47591contigH-paniculata_contig47591:219..596 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig47591.11808.1mRNA_H-paniculata_contig47591.11808.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig47591 113..620 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig47591.11808.1 ID=prot_H-paniculata_contig47591.11808.1|Name=mRNA_H-paniculata_contig47591.11808.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=126bp
MWDSGCVDPSFFKDARVMFTPPFHSGKRLDMLRLVAGNDNRLSTNAEVSV
PAPLSDMADRPAETWAEIRARTTTAGQSEMMRRKDTVKAREAKRLRFSGE
PANHRFSKRQRRHMGNVRQQCGREG*
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