prot_H-paniculata_contig4755.11803.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4755.11803.1
Unique Nameprot_H-paniculata_contig4755.11803.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length259
Homology
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BLAST of mRNA_H-paniculata_contig4755.11803.1 vs. uniprot
Match: D8LBL2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBL2_ECTSI)

HSP 1 Score: 139 bits (351), Expect = 4.610e-37
Identity = 78/160 (48.75%), Postives = 107/160 (66.88%), Query Frame = 0 
Query:  104 SPFVLPPPSWSLKDLNL------GSRPAASAIELTPEQVKKICAIAHIDLDPDG------EGSFDAASATRDVGAILRVMQSVRTGQGHGRDGAAAAESKE-EGEEEMGVDREEEGPWGGAAAWAAPLQKDIVSDGDMQKDILGSAERTEDGFFTAPRVV 250
            SP+ LPPP+WSL DLN+      G   A SA+ L+ E+V K+CA+AHI+L P+G       G  D ++  +DVGA+LR MQ++R        G     ++E EGEE       E+GPWGGA +WAAPL++D+VSDG +QK++LG+A+ TEDGFFTAP+VV
Sbjct:   76 SPYTLPPPTWSLSDLNVTDDDERGGDTARSAV-LSNEEVAKLCALAHIELAPEGADGSCSSGKLDVSAVKKDVGAMLRCMQTMRREIDDSSGGGXXRGNQEIEGEEG------EDGPWGGAVSWAAPLEEDVVSDGGIQKEVLGAAQHTEDGFFTAPKVV 228
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4755.11803.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LBL2_ECTSI4.610e-3748.75Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4755contigH-paniculata_contig4755:8162..11175 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4755.11803.1mRNA_H-paniculata_contig4755.11803.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4755 8061..11699 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4755.11803.1 ID=prot_H-paniculata_contig4755.11803.1|Name=mRNA_H-paniculata_contig4755.11803.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=259bp
MILRNAGLPWCSNRLASRVPCGTTVVASSLAIVTSSLGTAAAGGTRRLFP
TPTPITKPSPPRRFSSDVGNAAVGALENAHEEQKQDCAIPRYPAVDFVDA
DTPSPFVLPPPSWSLKDLNLGSRPAASAIELTPEQVKKICAIAHIDLDPD
GEGSFDAASATRDVGAILRVMQSVRTGQGHGRDGAAAAESKEEGEEEMGV
DREEEGPWGGAAAWAAPLQKDIVSDGDMQKDILGSAERTEDGFFTAPRVV
GGGEDGQQ*
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