mRNA_H-paniculata_contig475.11798.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig475.11798.1 vs. uniprot
Match: D8LBA3_ECTSI (FTCD_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBA3_ECTSI) HSP 1 Score: 334 bits (857), Expect = 9.500e-109 Identity = 179/288 (62.15%), Postives = 219/288 (76.04%), Query Frame = 2
Query: 110 AAAHTLCCAVVYLSEGRNNDLLDSLASVS---AGRDAALIRQFRDPTYHRTGFTIGGS-PGGVTRAVLEVSRHALQVIDLRLHEASHPRVGVVDHISIHPLGVDPGATVDTCRAGHRIAEILGRE-GLPVLLYGDLNDGRRLAKVRGSTPYFLSGNVPDEVDADVGPRKAGDVDPAKGISTIGCTPLVTNYNILLDTKTKSLAAAVTRSVREKDGGLPWVEALTLMRKDGRYETACNLLRPKETTRAMVLAAAELGAARVGVSILDKYTTSLTEEEAVQATTLMLSNK 958
A A CCAVVY+SEGRN+ LLD+LA + A A LIRQFRDP YHRTGFTIGG+ P V RA +EVSR A++ IDL HEA+HPR+GVVDH+S+HPLG + G+ +AG IA LG++ GLPVLLYGDLN+GRRLA+VR STPYF+ G +P +DAD+GP + VD ++GI+T+GCTPLVTNYNILL T K LA+ VTRS+REKDGGLPWVE+LTL RKDG +E ACNLLRPKETT A VLA AE AA VG+ ++D Y T LT+EEA+ A + + S +
Sbjct: 29 AEAPARCCAVVYVSEGRNSTLLDALAEAARTTAPGTAGLIRQFRDPQYHRTGFTIGGACPDAVARASVEVSRRAVRAIDLLEHEAAHPRIGVVDHVSVHPLGGE-GSQEIAQKAGLAIATALGKDVGLPVLLYGDLNNGRRLAEVRRSTPYFVGGELPATIDADLGPNE---VDASRGIATVGCTPLVTNYNILLSTDDKRLASKVTRSLREKDGGLPWVESLTLQRKDGTFEAACNLLRPKETTTANVLAVAEEQAAGVGIRVVDHYETGLTDEEALAAISRLSSER 312
BLAST of mRNA_H-paniculata_contig475.11798.1 vs. uniprot
Match: A0A4D9D4Y2_9STRA (FTCD_N domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4Y2_9STRA) HSP 1 Score: 191 bits (485), Expect = 1.750e-53 Identity = 123/278 (44.24%), Postives = 156/278 (56.12%), Query Frame = 2
Query: 125 LCCAVVYLSEGRNNDLLDSL---ASVSAGRDAALIRQFRDPTYHRTGFTIGGSPGGVTRAVLEVSRHALQVIDLRLH-EASHPRVGVVDHISIHPLGVDP--GATVDTCRAGHRIAEILGREGLPVLLYGDLNDGRRLAKVRGSTPYFLSGNVPDEVD-ADVGPRKAGDVDPAKGISTIGCTPLVTNYNILLDTKTKSLAAAVTRSVREKDGGLPWVEALTLMRKDGRYETACNLLRPKETTRAMVLAAAELGAARVGVSILDKYTTSLTEEEAVQAT 937
L C VY+SEGRN+ LLD L A S+ AL+++F D YHR+ FT+GG+P V L V A +D+ H +A+HPRVGVVDH+S HPLG P A C G R+ G+ +PVLLYG N+ + LA VR ST YF +V AD GP DVDP G+ G P V N+NI L T K +AA VT++VR +DGG VEALTL + G E ACNLL T A VL A A + GV + + YT +T +E + T
Sbjct: 14 LVCCKVYVSEGRNHALLDRLTHLARTSSPGLCALVQRFSDAVYHRSNFTLGGAPEPVVEVALRVINEAFLHVDMTKHVDATHPRVGVVDHVSFHPLGNTPLEVARKAACALGQRVG---GKWPVPVLLYGSCNN-KSLADVRRSTSYFKKMAFDAQVPHADYGPV---DVDPRLGLLCCGAVPYVQNFNIRLKTSEKQIAAMVTKAVRSRDGGPVGVEALTLRHEGGHMEVACNLLDVDTTDTARVLKLATDAARKAGVEVEEAYTVGMTGDEILAET 284
BLAST of mRNA_H-paniculata_contig475.11798.1 vs. uniprot
Match: A0A7S3XW83_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XW83_HETAK) HSP 1 Score: 189 bits (480), Expect = 3.290e-52 Identity = 117/282 (41.49%), Postives = 155/282 (54.96%), Query Frame = 2
Query: 140 VYLSEGRNNDLLDSLASVSAGR-----DAALIRQFRDPTYHRTGFTIGGSPGGVTRAVLEVSRHALQVIDLRLHEASHPRVGVVDHISIHPLGVDPGATVDTCRAGHRIAEILGRE-GLPVLLYGDLNDGRRLAKVRGSTPYFLSGNVPDEVDADVGPRKAGDVDPAKGISTIGCTPLVTNYNILLDTKTKSLAAAVTRSVREKDGGLPWVEALTLMRKDGRYETACNLLRPKETTRAMVLAAAELGAA-RVGVSILDKYTTSLTEEEAVQATTLMLSNKDS 964
+Y+SEGR+ ++ L ++ + D AL+ +F DP Y+RT F G V+R + EV+ A++ ++L HEASHPR+GVVDHIS+HPLG V A I G E G+P+L YG LN G+RL+ VR ST YF G EV AD+GPR VDP +G +G P V NYN+ + A+ R++REKDGGLP VEA+ L G YE ACNLL VLAAA AA + G+ + YT LT E L+ + S
Sbjct: 57 LYVSEGRDEQFINELHEMAHNKTGETFDCALVNKFSDPHYNRTSFCFAGHYSSVSRIIKEVAEVAIESLNLEEHEASHPRIGVVDHISVHPLGE---TMVFAEEAAREIGAYFGTEKGIPILFYGSLN-GKRLSAVRRSTSYFRGGQD-REVAADLGPRA---VDPRRGAMCVGAVPPVLNYNVRFRCTDRKAVGAIARALREKDGGLPGVEAVALRHAGGNYEAACNLLEADRVGPEEVLAAATAAAAAQGGIEVDAAYTIGLTAAEVADRLARALAGRCS 330
BLAST of mRNA_H-paniculata_contig475.11798.1 vs. uniprot
Match: A0A8J9WP56_9CHLO (Probable formimidoyltransferase-cyclodeaminase n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WP56_9CHLO) HSP 1 Score: 166 bits (419), Expect = 9.200e-44 Identity = 109/278 (39.21%), Postives = 149/278 (53.60%), Query Frame = 2
Query: 140 VYLSEGRNNDLLDSLASV-SAGRDAALIRQFRDPTYHRTGFTIGG-SPGGVTRAVLEVSRHALQVIDLRLHEASHPRVGVVDHISIHPLGVDPGATVDTCRAGHRIAEILGREG---LPVLLYGDLNDGRR-LAKVRGSTPYFLSGN-----------VPDEVDADVGPRKAGDVDPAKGISTIGCTPLVTNYNILLDTKTKSLAAAVTRSVREKDGGLPWVEALTLMRKDGRYETACNLLRPKETTRAMVLAAAELGAARVGVSILDKYTTSLTEEE 922
VY+SEG LL+ L V S AL+ F D Y+RTGFT+ P + R + ++R AL IDLRLH ASHPR+GVVDHIS HPLG GAT+ + R+ EG +PV LYG + ++ LA +R + YF +P + D GP +DP++G++T+G P V NYN+LL T L+ + R+V + GGLP VEA+ L + G E ACNLL ++ V AA + A + G+ + D Y T T EE
Sbjct: 15 VYISEGSKLALLEQLKGVASTDTGTALVHTFIDKPYNRTGFTLASPGPQQLARTAVHLARAALAAIDLRLHSASHPRLGVVDHISCHPLGT--GATLSSATEAARLIGAQLGEGELAVPVFLYGSAHKNQQSLADIRRACGYFKGSKQGAFHGASGIIIPPGLQPDYGPEH---LDPSRGLATVGAVPFVVNYNVLLKTDDMQLSRQIARAVSSRGGGLPSVEAMALPHEGG-VEIACNLLDAATSSPEAVGAAVQQHALKHGIVVGDAYMTGRTPEE 286
BLAST of mRNA_H-paniculata_contig475.11798.1 vs. uniprot
Match: A8HWL3_CHLRE (Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8HWL3_CHLRE) HSP 1 Score: 157 bits (396), Expect = 8.290e-41 Identity = 103/250 (41.20%), Postives = 136/250 (54.40%), Query Frame = 2
Query: 140 VYLSEGRNNDLLDSL-ASVSAGRDAALIRQFRDPTYHRTGFT-IGGSPGGVTRAVLEVSRHALQVIDLRLHEASHPRVGVVDHISIHPLG-VDPGAT-----VDTCRAGHRIAEILGREGLPVLLYGDLNDGRR-LAKVRGSTPYFL-----------------SGNVPDEVDADVGPRKAGDVDPAKGISTIGCTPLVTNYNILLDTKTKSLAAAVTRSVREKDGGLPWVEALTLMRKDGRYETACNLL 811
VY+SEGR+ L+ L A+ A AL+ F+D YHRTGFT + G P +T AV+ +SR ALQ++DLR H+ASHPR+GVVDHI++HPLG + P A V T AG + E+ LPV YG + RR LA +R YF +GN D+GP A G+ TIG TP V NYN+ L + A + +++ E+ GGLP V+A+ L DG E ACNLL
Sbjct: 3 VYISEGRDKALIGKLEAAAQATPGVALVNVFQDEPYHRTGFTLVSGQPDRLTEAVVRLSRAALQLLDLRRHDASHPRLGVVDHIALHPLGGLAPAAATHSRGVATTVAGGQEEEV---PALPVYFYGHAHPSRRGLADIRRKLGYFRRSPEGGWRGGLEQQQLPAGNDLSAFPPDLGPATAS---ARWGVVTIGATPWVGNYNVPLSGVDMATARKLAKAISERGGGLPGVQAMALQHADGLVEVACNLL 246
BLAST of mRNA_H-paniculata_contig475.11798.1 vs. uniprot
Match: I0YZZ2_COCSC (Formiminotransferase n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YZZ2_COCSC) HSP 1 Score: 155 bits (392), Expect = 7.210e-40 Identity = 111/298 (37.25%), Postives = 161/298 (54.03%), Query Frame = 2
Query: 140 VYLSEGRNNDLLDSLASVSAGR---DAALIRQFRDPTYHRTGFT-IGGSPGGVTRAVLEVSRHALQVIDLRLHEASHPRVGVVDHISIHPLGVDPGATV--DTCRA-GHRIAEILGREGLPVLLYGDLNDGRR-LAKVRGSTPYFLSG-----------NVPDEVDADVGPRKAGDVDPAKGISTIGCTPLVTNYNILLDTKTKSLAAAVTRSVREKDGGLPWVEALTLMRKDGRY---ETACNLLRPKETTRAMVLAAAELGAARVGVSILDKYTTSLTEEEAVQATTLMLSNKDSS 967
VY+SEG + L+ L V A + +AL+ F D Y+RTGFT + +P + +V+ ++R AL+ IDLR H ASHPR+GVVDHIS HPLG D T +T R+ G ++ E G +PV LYG +R LA +R + YF ++P + D GP + +DP +G++T+G P V N+NILL T LA + R+V + GGLP VEA+ L ++G E ACNLL + V A+ + A R G+++ Y T T EE L+++ S+
Sbjct: 10 VYISEGLRSTLVQQL-KVCADKCISGSALVHTFVDKPYNRTGFTLVSPAPHELAGSVVRLARAALETIDLRSHAASHPRLGVVDHISCHPLGRDAALTAAAETARSIGTQLGE--GELAVPVFLYGSAGSQQRSLADLRRACGYFKGSKQGAFKGASEISMPAGMRPDFGPSE---LDPRRGLATVGALPWVVNFNILLQTDDLQLARQIARAVSGRGGGLPSVEAMALPHEEGEILGIEIACNLLDVAVSPTEAVAASVQEHADRHGITVGRGYMTGKTPEELCSLAEQALADRTSN 301
BLAST of mRNA_H-paniculata_contig475.11798.1 vs. uniprot
Match: A0A061R7T0_9CHLO (Formimidoyltransferase-cyclodeaminase-like isoform x1 (Fragment) n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R7T0_9CHLO) HSP 1 Score: 150 bits (378), Expect = 2.480e-38 Identity = 101/249 (40.56%), Postives = 134/249 (53.82%), Query Frame = 2
Query: 140 VYLSEGRNNDLLDSLASVSAGRDA-ALIRQFRDPTYHRTGFTIGGSP-GGVTRAVLEVSRHALQVIDLRLHEASHPRVGVVDHISIHPLGVDPGATVDTCRAGHRIAEILGREGLP--VLLYGDLN-DGRRLAKVRGSTPYF-------LSGNVPDE--VDADVGPRKAGDVDPAKGISTIGCTPLVTNYNILLDTKTKSLAAAVTRSVREKDGGLPWVEALTLMRKDGRYETACNLLRPKETTRAMVL 844
VY SEG N LL +L + +GR+ AL+ +F D Y+R+ FT+ + G A E+++ A+ +DLR HEASHPR+GVVDHIS HPL A D I I+ E P V LYG + +GRRLA +R S YF SG + D + D+GP V P GI +G + +TNYNILL+T + R V E+ GGLP V+A+ L +G E ACNLL + T VL
Sbjct: 2 VYXSEGXNVKLLKTLEQLVSGRNGVALVNKFTDTPYNRSSFTLASAGVGEAAVAAAELAKAAICALDLRTHEASHPRLGVVDHISCHPLTA-AAAMEDAAALARSIGSIVXAEPTPAPVFLYGAAHPEGRRLADLRRSFGYFEGSAXSSWSGAIDDRHLLTPDLGPVX---VSPRTGIVAVGASKWITNYNILLNTADLVTGRKIAREVSERGGGLPHVQAMALRHAEGAVEVACNLLDHEATPPPAVL 246
BLAST of mRNA_H-paniculata_contig475.11798.1 vs. uniprot
Match: A0A7S0PKG3_9CHLO (Hypothetical protein n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0PKG3_9CHLO) HSP 1 Score: 147 bits (370), Expect = 1.360e-36 Identity = 107/264 (40.53%), Postives = 141/264 (53.41%), Query Frame = 2
Query: 107 TAAAHTLCCAVVYLSEGRNNDLLDSLASV----SAGRDAALIRQFRDPTYHRTGFTIGGSPGG-VTRAVLEVSRHALQVIDLRLHEASHPRVGVVDHISIHPLGVDPGATVDTCRAGHRIAEILGREGLPVLLYGDL-NDGRRLAKVRGSTPYF---LSGNVPDEVDA------DVGPRKAGDVDPAK-GISTIGCTPLVTNYNILL--------DTKTK-----SLAAAVTRSVREKDGGLPWVEALTLMRKDGRYETACNLL 811
T+AA AVVY+SEGRN +LD + ++ S R AL+ FRD Y+RTGFT G VTR+ LEV+ +L+V+DLR H A+HPRVGVVDH+S H L D G D I LG G+PV LYGD +DG L ++R + YF SG E A D GP DV P + G++ +G P V NYN+ L D + + S AV + V ++ GGL V+++ L D + E ACNLL
Sbjct: 2 TSAARAALAAVVYVSEGRNAVVLDKIEAIARKASTTRPVALVNIFRDVEYNRTGFTFAGRDANDVTRSALEVASASLRVVDLREHAATHPRVGVVDHVSCHAL--DAGRRADAAELAREIGAGLGSFGVPVKLYGDAASDGVGLDEIRRRSGYFSGAASGTWRGEFVAERGFAFDYGP----DVVPEREGLAMVGAVPWVCNYNVPLVFTFGVSMDAEQRLKRAMSFGRAVAKRVSQRGGGLQSVQSMALPHGD-KVEVACNLL 258
BLAST of mRNA_H-paniculata_contig475.11798.1 vs. uniprot
Match: UPI0009005AB3 (formimidoyltransferase-cyclodeaminase isoform X1 n=2 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI0009005AB3) HSP 1 Score: 147 bits (371), Expect = 1.460e-36 Identity = 104/303 (34.32%), Postives = 151/303 (49.83%), Query Frame = 2
Query: 122 TLCCAVVYLSEGRNNDLLDSLA-SVSAGRDAALIRQFRDPTYHRTGFTIGGS-----PGG---VTRAVLEVSRHALQVIDLRLHEASHPRVGVVDHISIHPLGVDPGATVDTCRAGHRIAEILGRE-GLPVLLYGDLND-GRRLAKVRGSTPYFL---SGNV----PDEVDADVGPRKA-GDVDPAKGISTIGCTPLVTNYNILLDTKTKSLAAAVTRSVREKDGGLPWVEALTLMRKDGRYETACNLLRPKETTRAMVLAAAELGAARVGVSILDKYTTSLTEEEAVQATTLMLSNKDSSVE 973
TL C +Y+SE RN L+S+ + +A LI +F D TY+R G+T+ P G + A + A + ID +H SHPR+GVVDHI +HPL + T +A +G + +PV LYG ++ GR L +R YF+ GN+ P+ + + P + VDP+KG+ IG T V NYN+ + + S + + + E+ GGLP V+A+ L DG E ACNLL P + V E A G+ Y T LT+EE +Q L +DSSV+
Sbjct: 32 TLACCKLYISESRNKAALESIERAAKLFHEAKLINKFEDETYNRVGYTLVSKLPPKLPSGFFPLKDAPFAMVESAYKAIDFNVHSGSHPRLGVVDHICLHPLA--NATSEQTANIARSLARDIGTKLEVPVFLYGAAHEKGRTLDSIRRELGYFMPNTQGNIWAGGPNSENLPICPDEGPSQVDPSKGVIVIGSTRWVDNYNVPIFSTNISAVRRIAKVIGERGGGLPSVQAMALAHGDGTVEVACNLLDPSKVGGDKVQVEVERLAREEGMVAGKGYFTDLTQEEIIQT---FLDYEDSSVD 329
BLAST of mRNA_H-paniculata_contig475.11798.1 vs. uniprot
Match: A4S2F9_OSTLU (FTCD_N domain-containing protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S2F9_OSTLU) HSP 1 Score: 141 bits (355), Expect = 2.160e-34 Identity = 112/307 (36.48%), Postives = 153/307 (49.84%), Query Frame = 2
Query: 134 AVVYLSEGRNNDLLDSLASVSAG-----RDAALIRQFRDPTYHRTGFTIGGSP-GGVTRAVLEVSRHALQVIDLRLHEASHPRVGVVDHISIHPLGVDPGATVDTCRAGHRIAEILGREGLPVLLYGDL-NDGRRLAKVRGSTPYF---LSGNVPDEVDA------DVGPRKAGDVDPAKGISTIGCTPLVTNYNILL---------DTKTKSLAA-----AVTRSVREKDGGLPWVEALTLMRKDGRYETACNLL-----RPKETTRAMVLAAAELGAARV---GVSIL--DKYTTSLTEEEAVQA 934
AVVY+SEGR +LD + V+ R AL+ FRD Y+RTGFT+ G V RA L+V++ +L+ +D+R H+A+HPRVGVVDH+S H L G + I E LG G+PV LYGD +DG L ++R + YF G E D GP DV +G +G P V NYN+ L D +T+ A AV + V + GGLP V+++ L G+ E ACNLL + RA A AE A ++ G S + D Y T+ T E ++A
Sbjct: 14 AVVYVSEGRRTAVLDVIERVAREATAPRRPVALVNVFRDAEYNRTGFTLAGRDVDDVRRAALDVAQVSLREVDMRAHDATHPRVGVVDHVSCHALA---GERAGAAKLAKSIGEGLGTLGVPVKLYGDAASDGIGLDEIRRRSGYFSGAAGGRWTGEFAVERGFAFDYGPS---DVPEREGFGMVGAVPWVCNYNVPLAFTFADEGLDAETRMTRAMAFGRAVAKRVSARGGGLPSVQSMALPH-GGKVEVACNLLDVDASSTADVQRATAAAVAETDALKILGAGASAMVEDGYVTNQTPESIIRA 313 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig475.11798.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig475.11798.1 >prot_H-paniculata_contig475.11798.1 ID=prot_H-paniculata_contig475.11798.1|Name=mRNA_H-paniculata_contig475.11798.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=319bp MALLQCIKLVGTMSSKNWMIPSPIQHKATAAAHTLCCAVVYLSEGRNNDLback to top mRNA from alignment at H-paniculata_contig475:22167..28857+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig475.11798.1 ID=mRNA_H-paniculata_contig475.11798.1|Name=mRNA_H-paniculata_contig475.11798.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6691bp|location=Sequence derived from alignment at H-paniculata_contig475:22167..28857+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig475:22167..28857+ >mRNA_H-paniculata_contig475.11798.1 ID=mRNA_H-paniculata_contig475.11798.1|Name=mRNA_H-paniculata_contig475.11798.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1914bp|location=Sequence derived from alignment at H-paniculata_contig475:22167..28857+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |