prot_H-paniculata_contig4749.11794.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4749.11794.1
Unique Nameprot_H-paniculata_contig4749.11794.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length426
Homology
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BLAST of mRNA_H-paniculata_contig4749.11794.1 vs. uniprot
Match: A0A6H5KR72_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR72_9PHAE)

HSP 1 Score: 119 bits (298), Expect = 1.560e-26
Identity = 213/313 (68.05%), Postives = 233/313 (74.44%), Query Frame = 0 
Query:   43 HATWHVPASPAPHVAVQAASAYQEGTARTVEGPYSRARPAHGMGERKPSFNMKGLLKSVSTHSFRRHHHGEGAGRGMASDEKTVLASKGWLLEKQGKLHEAELMYSRHCLRSQKTHGKESLSLAGDLDRLVNLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAHDIYTSHLGAQHPHAVAAQLWIQQLSAPQPAPRVRRR 355
            H+TWH  AS A   A +     Q+G + ++     RAR A     +K  FNMKGLL SVS+HSF R         G A    + + +KGW LEKQGKL +AELMYSRHC+R+QK HGKESLSLA +LDRLV++ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                     R+HDIY  HLG  HPH+VA QLW+QQLSAP P PR  RR
Sbjct:   14 HSTWHPEASSAAEAAPRPNGLVQDGASTSLNNSPERARRA---APKKSGFNMKGLLSSVSSHSFSRR-----TKPGGAKKSSSEVDTKGWFLEKQGKLDQAELMYSRHCVRAQKNHGKESLSLADNLDRLVHVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNNVAGLLATTGKPEEALPLFARSHDIYVRHLGENHPHSVATQLWVQQLSAPAPPPRRARR 318
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4749.11794.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KR72_9PHAE1.560e-2668.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 250..283
e-value: 220.0
score: 3.2
coord: 292..325
e-value: 21.0
score: 12.1
coord: 208..241
e-value: 0.036
score: 23.2
coord: 124..157
e-value: 470.0
score: 0.3
coord: 166..199
e-value: 31.0
score: 10.6
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 292..325
score: 7.788
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 208..241
score: 8.26
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 250..283
score: 5.458
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 117..278
e-value: 1.0E-33
score: 118.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 281..345
e-value: 2.3E-7
score: 32.6
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 125..240
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 204..332
NoneNo IPR availablePFAMPF13424TPR_12coord: 252..323
e-value: 1.3E-13
score: 51.0
coord: 171..240
e-value: 5.6E-14
score: 52.2
NoneNo IPR availablePANTHERPTHR45641FAMILY NOT NAMEDcoord: 125..334
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 166..325
score: 12.326

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4749contigH-paniculata_contig4749:703..12795 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4749.11794.1mRNA_H-paniculata_contig4749.11794.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4749 504..13604 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4749.11794.1 ID=prot_H-paniculata_contig4749.11794.1|Name=mRNA_H-paniculata_contig4749.11794.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=426bp
MRFSPKRSTGAARPTGTIAAAAAAERDGAQEGGGGSKKMEVTHATWHVPA
SPAPHVAVQAASAYQEGTARTVEGPYSRARPAHGMGERKPSFNMKGLLKS
VSTHSFRRHHHGEGAGRGMASDEKTVLASKGWLLEKQGKLHEAELMYSRH
CLRSQKTHGKESLSLAGDLDRLVNLLHKEGKLEEAEPLCRRSLEIKRKSL
GEDSEHVATSFVNLGRVLEDKGQYENALISLKKGLAIREQVLEPGNPDIV
SALAWIGDIHCKRDEHEEALAIARKVAAAHESTLGPDDIKVASALVNVGG
LLATLGRSQEALPLFTRAHDIYTSHLGAQHPHAVAAQLWIQQLSAPQPAP
RVRRRSPPPALSALSGGARQAGHPPPLLEESTEESSRDEGIMSAATVGVT
PDTMPPAPIVSTVLPQPPSAEEEKS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom