prot_H-paniculata_contig47467.11792.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig47467.11792.1
Unique Nameprot_H-paniculata_contig47467.11792.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length146
Homology
BLAST of mRNA_H-paniculata_contig47467.11792.1 vs. uniprot
Match: A0A061F8M9_THECC (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 n=1 Tax=Theobroma cacao TaxID=3641 RepID=A0A061F8M9_THECC)

HSP 1 Score: 97.4 bits (241), Expect = 9.000e-21
Identity = 54/150 (36.00%), Postives = 82/150 (54.67%), Query Frame = 0
Query:    3 HWQRAEKVETSGLIEKGLWTQVERPKNKLVVSTMMIYKRKIGDDGKVEKYKCRLVAHGNRQIKGIRFRAASSPAPAAASTKKMLSLAAIQDWELRHVDFELAYLQVPIDQEIFVETRVKY---REFPGA---VGRLNEAIYRLVQADRCW 146
            HW+ A  +E   L + G W+ V+ P N   V    +YK K+  DGKVE+YK RLVA G  QI+G  ++   SP       +   +LAA Q+W L  +D   A+L   + +E+++E    Y   RE+P +   V +L++++Y L QA R W
Sbjct:  171 HWKEAMDIELKALEDNGTWSIVQLPSNYHAVGCKWVYKVKLNADGKVERYKARLVAKGYNQIEGFDYQETFSPVARQTIVRMFFALAAAQNWRLSQLDINNAFLNGELTEEVYMELPQGYTFKREYPTSSRLVCKLHKSLYGLKQASRAW 320          
BLAST of mRNA_H-paniculata_contig47467.11792.1 vs. uniprot
Match: A0A6H5GI29_9HEMI (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GI29_9HEMI)

HSP 1 Score: 94.7 bits (234), Expect = 8.160e-20
Identity = 50/143 (34.97%), Postives = 82/143 (57.34%), Query Frame = 0
Query:    4 WQRAEKVETSGLIEKGLWTQVERPKNKLVVSTMMIYKRKIGDDGKVEKYKCRLVAHGNRQIKGIRFRAASSPAPAAASTKKMLSLAAIQDWELRHVDFELAYLQVPIDQEIFVETRVKYREFPGAVGRLNEAIYRLVQADRCW 146
            W RA + E + L++   +  V+ P  K  +S   +YK K  +  +  +YK RLV  G  Q+ G+ F+   SP    +S + ++S+AA++DW++ H+D + AYL   +++EI+V     + E  G V RL +A+Y L QA RCW
Sbjct:  240 WDRAMEEERNSLVKNNTYEVVDLPPGKKTLSMKWVYKIKETEGDR--RYKARLVVRGCAQVPGLDFQETYSPVVKYSSLRFLMSMAAVKDWDIDHLDVKTAYLYGDLNEEIYVRPPANFSEPDGQVWRLKKAVYGLKQAGRCW 380          
BLAST of mRNA_H-paniculata_contig47467.11792.1 vs. uniprot
Match: A0A6H5GGZ1_9HEMI (Integrase catalytic domain-containing protein (Fragment) n=2 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GGZ1_9HEMI)

HSP 1 Score: 94.7 bits (234), Expect = 8.650e-20
Identity = 50/143 (34.97%), Postives = 82/143 (57.34%), Query Frame = 0
Query:    4 WQRAEKVETSGLIEKGLWTQVERPKNKLVVSTMMIYKRKIGDDGKVEKYKCRLVAHGNRQIKGIRFRAASSPAPAAASTKKMLSLAAIQDWELRHVDFELAYLQVPIDQEIFVETRVKYREFPGAVGRLNEAIYRLVQADRCW 146
            W RA + E + L++   +  V+ P  K  +S   +YK K  +  +  +YK RLV  G  Q+ G+ F+   SP    +S + ++S+AA++DW++ H+D + AYL   +++EI+V     + E  G V RL +A+Y L QA RCW
Sbjct:  845 WDRAMEEERNSLVKNNTYEVVDLPPGKKTLSMKWVYKIKETEGDR--RYKARLVVRGCAQVPGLDFQETYSPVVKYSSLRFLMSMAAVKDWDIDHLDVKTAYLYGDLNEEIYVRPPANFSEPDGQVWRLKKAVYGLKQAGRCW 985          
BLAST of mRNA_H-paniculata_contig47467.11792.1 vs. uniprot
Match: A0A060SSE0_PYCCI (Integrase catalytic domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SSE0_PYCCI)

HSP 1 Score: 94.0 bits (232), Expect = 1.620e-19
Identity = 51/145 (35.17%), Postives = 84/145 (57.93%), Query Frame = 0
Query:    2 EHWQRAEKVETSGLIEKGLWTQVERPKNKLVVSTMMIYKRKIGDDGKVEKYKCRLVAHGNRQIKGIRFRAASSPAPAAASTKKMLSLAAIQDWELRHVDFELAYLQVPIDQEIFVETRVKYREFPGAVGRLNEAIYRLVQADRCW 146
            E W+ A   E     +  L+ +VERP+N+ VV    +++ K G DGK++KYK RLVA G  Q++G+ +    +P    AS + +L+ AA  D E+  +D + A+L   +++EIF+E    +++    V RL +++Y L QA R W
Sbjct:  977 EQWKAACAEELLSFAKAELYDEVERPRNRKVVDCKWVFRIKHGPDGKIQKYKARLVAKGFTQVEGVDYTDTFAPVTKFASIRMLLAFAAKHDLEVHQMDVKSAFLNGDLEEEIFMEAPPGFQQDKAHVWRLQKSLYGLKQASREW 1121          
BLAST of mRNA_H-paniculata_contig47467.11792.1 vs. uniprot
Match: A0A5N6PPX5_9ASTR (Integrase catalytic domain-containing protein n=2 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6PPX5_9ASTR)

HSP 1 Score: 90.9 bits (224), Expect = 1.920e-18
Identity = 51/146 (34.93%), Postives = 76/146 (52.05%), Query Frame = 0
Query:    3 HWQRAEKVETSGLIEKGLWTQVERPKNKLVVSTMMIYKRKIGDDGKVEKYKCRLVAHGNRQIKGIRFRAASSPAPAAASTKKMLSLAAIQDWELRHVDFELAYLQVPIDQEIFVETRVKYRE--FPGAVGRLNEAIYRLVQADRCW 146
            HW  A   E + L +   W  V RP    VV +  +++ K   DG +++YK RLVA G  Q+ G+ +    SP   A + + +LSLA + +W+LR +D   A+L   I + +F+E    +    FP  V  L +AIY L QA R W
Sbjct:  907 HWIEAMNHELNALYKNDTWVLVPRPATHNVVGSKWLFRTKFRADGSIDRYKARLVAQGYSQVPGLDYSHTFSPVVKATTVRVVLSLAVVNNWKLRQLDVNNAFLHGKITERVFMEQPPGFANPHFPNHVCLLKKAIYGLKQAPRAW 1052          
BLAST of mRNA_H-paniculata_contig47467.11792.1 vs. uniprot
Match: A0A2I0IJP3_PUNGR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0IJP3_PUNGR)

HSP 1 Score: 90.1 bits (222), Expect = 1.970e-18
Identity = 51/144 (35.42%), Postives = 80/144 (55.56%), Query Frame = 0
Query:    4 WQRAEKVETSGLIEKGLWTQVERPKNKLVVSTMMIYKRKIGDDGKVEKYKCRLVAHGNRQIKGIRFRAASSPAPAAASTKKMLSLAAIQDWELRHVDFELAYLQVPIDQEIFVETRVKYR-EFPGAVGRLNEAIYRLVQADRCW 146
            W  A K E   + +  +W  V+ P+  + +    ++KRKIG DGKVE YK RLVA G RQ +G+ +    SP     S + ML++AA  D+E+  +D + A+L V I+++IF++    +  +    V +L  +IY L Q  R W
Sbjct:   91 WLEAMKSEMDSMSKNQVWDLVDPPEGIVPIGNKWVFKRKIGADGKVETYKARLVAKGYRQKQGVDYEETFSPVAMLKSLRIMLAIAAHYDYEVWQMDVKTAFLNVSIEEDIFMDQPKGFESKDKSKVCKLKRSIYGLTQVSRSW 234          
BLAST of mRNA_H-paniculata_contig47467.11792.1 vs. uniprot
Match: A0A2R6NNP3_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A2R6NNP3_9APHY)

HSP 1 Score: 90.1 bits (222), Expect = 2.780e-18
Identity = 51/143 (35.66%), Postives = 82/143 (57.34%), Query Frame = 0
Query:    4 WQRAEKVETSGLIEKGLWTQVERPKNKLVVSTMMIYKRKIGDDGKVEKYKCRLVAHGNRQIKGIRFRAASSPAPAAASTKKMLSLAAIQDWELRHVDFELAYLQVPIDQEIFVETRVKYREFPGAVGRLNEAIYRLVQADRCW 146
            W+ A   E    ++  L+ +VE PKN+ VV +  +++ K G +GK+EKYK RLVA G  Q+KGI +    +P     S + +LSLAA  D E+  +D + A+L   +D+EI+++    +    G V +L +++Y L QA   W
Sbjct:    9 WKIACAQEMLAFVKANLFDEVECPKNRKVVGSKWVFRIKRGPNGKIEKYKARLVAQGFTQVKGIDYTETFAPVAKFISIRTLLSLAAKLDLEIHQMDVKSAFLNGDLDEEIYMKCPPGHHAKEGIVWKLKKSLYELKQASCEW 151          
BLAST of mRNA_H-paniculata_contig47467.11792.1 vs. uniprot
Match: A0A2Z6M6S6_TRISU (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6M6S6_TRISU)

HSP 1 Score: 90.1 bits (222), Expect = 3.540e-18
Identity = 52/146 (35.62%), Postives = 78/146 (53.42%), Query Frame = 0
Query:    4 WQRAEKVETSGLIEKGLWTQVERPKNKLVVSTMMIYKRKIGDDGKVEKYKCRLVAHGNRQIKGIRFRAASSPAPAAASTKKMLSLAAIQDWELRHVDFELAYLQVPIDQEIFVETR---VKYREFPGAVGRLNEAIYRLVQADRCW 146
            W++A   E   L   G W  V  P  K +V    +Y  K+G DGK++++K RLVA G  QI G+ +    SP    AS +  LS+AAIQ W L  +D + A+L   +++E+++E     V   E    V RL+ ++Y L Q+ R W
Sbjct:  703 WRQAMIDEMCALQSSGTWELVPLPPGKSLVGCRWVYTVKVGPDGKIDRFKARLVAKGYTQIFGLDYSDTFSPVAKMASVRLFLSIAAIQHWSLHQLDIKNAFLHGDLEEEVYMEQPPGFVAQGESSNMVCRLHRSLYGLKQSPRAW 848          
BLAST of mRNA_H-paniculata_contig47467.11792.1 vs. uniprot
Match: A0A151T5R4_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151T5R4_CAJCA)

HSP 1 Score: 90.1 bits (222), Expect = 3.560e-18
Identity = 52/146 (35.62%), Postives = 81/146 (55.48%), Query Frame = 0
Query:    2 EHWQRAEKVETSGLIEKGLWTQVERPKNKLVVSTMMIYKRKIGDDGKVEKYKCRLVAHGNRQIKGIRFRAASSPAPAAASTKKMLSLAAIQDWELRHVDFELAYLQVPIDQEIFVETRVKYR-EFPGAVGRLNEAIYRLVQADRCW 146
            E W+ A   E + L E   W  V+ PK K VV    I+  K+G DGK+++YK RLVA G  Q  GI +    +P     S + ++SLAA  DW+L  +D + A+L   +++E++++    +  E    V RLN+++Y L Q+ R W
Sbjct:  862 EKWRAAVLEEMAALEENKTWDIVKLPKEKKVVGCRWIFTTKMGADGKIDRYKARLVAQGYTQTHGIDYEETFAPVAKLNSIRILISLAANLDWKLHQLDVKNAFLNGKLEEEVYMKLPPGFEGENNDVVCRLNKSLYGLKQSPRAW 1007          
BLAST of mRNA_H-paniculata_contig47467.11792.1 vs. uniprot
Match: A0A0J7K690_LASNI (Retrovirus-related pol polyprotein from transposon tnt 1-94 (Fragment) n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K690_LASNI)

HSP 1 Score: 89.7 bits (221), Expect = 4.740e-18
Identity = 50/145 (34.48%), Postives = 82/145 (56.55%), Query Frame = 0
Query:    2 EHWQRAEKVETSGLIEKGLWTQVERPKNKLVVSTMMIYKRKIGDDGKVEKYKCRLVAHGNRQIKGIRFRAASSPAPAAASTKKMLSLAAIQDWELRHVDFELAYLQVPIDQEIFVETRVKYREFPGAVGRLNEAIYRLVQADRCW 146
            E W+RA + E S LI+   WT+ + P  +  ++  +I+K+K   DGKV +YK RLV  G  Q  GI +    +P     S + + SLAA +D+E+   D + A+L   +D+EIF++   +  +  G V +L +++Y L Q+ R W
Sbjct:  578 EQWRRAIEEEESALIKNNTWTKTKLPTGRKAITAKIIFKKKRDADGKVHRYKARLVVRGFSQRPGIDYNETYAPVIRYESIRFLFSLAAKEDFEIAQFDIKTAFLNGELDEEIFMQLPTRVTD-AGNVVKLQKSLYGLKQSPRQW 721          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig47467.11792.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A061F8M9_THECC9.000e-2136.00Cysteine-rich RLK (RECEPTOR-like protein kinase) 8... [more]
A0A6H5GI29_9HEMI8.160e-2034.97Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5GGZ1_9HEMI8.650e-2034.97Integrase catalytic domain-containing protein (Fra... [more]
A0A060SSE0_PYCCI1.620e-1935.17Integrase catalytic domain-containing protein n=1 ... [more]
A0A5N6PPX5_9ASTR1.920e-1834.93Integrase catalytic domain-containing protein n=2 ... [more]
A0A2I0IJP3_PUNGR1.970e-1835.42Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2R6NNP3_9APHY2.780e-1835.66Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2Z6M6S6_TRISU3.540e-1835.62Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A151T5R4_CAJCA3.560e-1835.62Retrovirus-related Pol polyprotein from transposon... [more]
A0A0J7K690_LASNI4.740e-1834.48Retrovirus-related pol polyprotein from transposon... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 21..146
e-value: 1.6E-22
score: 80.4
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 2..146
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 2..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig47467contigH-paniculata_contig47467:181..618 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig47467.11792.1mRNA_H-paniculata_contig47467.11792.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig47467 181..618 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig47467.11792.1 ID=prot_H-paniculata_contig47467.11792.1|Name=mRNA_H-paniculata_contig47467.11792.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=146bp
WEHWQRAEKVETSGLIEKGLWTQVERPKNKLVVSTMMIYKRKIGDDGKVE
KYKCRLVAHGNRQIKGIRFRAASSPAPAAASTKKMLSLAAIQDWELRHVD
FELAYLQVPIDQEIFVETRVKYREFPGAVGRLNEAIYRLVQADRCW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like