mRNA_H-paniculata_contig4746.11790.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4746.11790.1 vs. uniprot
Match: D7FLK6_ECTSI (Galactinol--sucrose galactosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLK6_ECTSI) HSP 1 Score: 233 bits (594), Expect = 9.580e-72 Identity = 106/118 (89.83%), Postives = 113/118 (95.76%), Query Frame = 1
Query: 10 QLPACYGRRPVIRGSDDFYPRDNLSHSPHIYANAFNGLMISNCGLQDWDMFQTGIGEASWMHAAARAVSGGPVYISDRPGEHNTEILRRMVLEDGSVLKPPSNALPCLKSLFVDPQRD 363
QLPACYGR+PVIRGSDDFYPRD SHSPHIYANAFN LMIS+CGLQDWDMFQT IG+ASWMHAA+RAVSGGPVYISDRPG+HNTEILRRMVLEDG VLKPP+NALPCLKSLFVDPQR+
Sbjct: 250 QLPACYGRQPVIRGSDDFYPRDKGSHSPHIYANAFNSLMISSCGLQDWDMFQTNIGDASWMHAASRAVSGGPVYISDRPGDHNTEILRRMVLEDGGVLKPPANALPCLKSLFVDPQRE 367
BLAST of mRNA_H-paniculata_contig4746.11790.1 vs. uniprot
Match: A0A6H5JFU4_9PHAE (Galactinol--sucrose galactosyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFU4_9PHAE) HSP 1 Score: 233 bits (594), Expect = 2.680e-69 Identity = 106/118 (89.83%), Postives = 113/118 (95.76%), Query Frame = 1
Query: 10 QLPACYGRRPVIRGSDDFYPRDNLSHSPHIYANAFNGLMISNCGLQDWDMFQTGIGEASWMHAAARAVSGGPVYISDRPGEHNTEILRRMVLEDGSVLKPPSNALPCLKSLFVDPQRD 363
QLPACYGR+PVIRGSDDFYPRD SHSPHIYANAFN LMIS+CGLQDWDMFQT IG+ASWMHAA+RAVSGGPVYISDRPG+HNTEILRRMVLEDG VLKPP+NALPCLKSLFVDPQR+
Sbjct: 595 QLPACYGRQPVIRGSDDFYPRDKGSHSPHIYANAFNSLMISSCGLQDWDMFQTNIGDASWMHAASRAVSGGPVYISDRPGDHNTEILRRMVLEDGGVLKPPANALPCLKSLFVDPQRE 712
BLAST of mRNA_H-paniculata_contig4746.11790.1 vs. uniprot
Match: A0A836CF54_9STRA (Raffinose synthase or seed imbibition protein Sip1-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF54_9STRA) HSP 1 Score: 159 bits (403), Expect = 2.600e-47 Identity = 74/109 (67.89%), Postives = 88/109 (80.73%), Query Frame = 1
Query: 34 RPVIRGSDDFYPRDNLSHSPHIYANAFNGLMISNCG-LQDWDMFQTGIGEASWMHAAARAVSGGPVYISDRPGEHNTEILRRMVLEDGSVLKPPSNALPCLKSLFVDPQ 357
RP++RGSDDFYPRD SH HIYANAFN L++++CG LQDWDMFQT +G MHAAARA+SGGPVYISDRPGEH+ ++R+MVLEDGSV + +ALP L LFVD Q
Sbjct: 1 RPIVRGSDDFYPRDPASHGTHIYANAFNALLLAHCGTLQDWDMFQTSLGAVGAMHAAARAISGGPVYISDRPGEHDAALIRKMVLEDGSVPRARRSALPTLLRLFVDAQ 109
BLAST of mRNA_H-paniculata_contig4746.11790.1 vs. uniprot
Match: A0A7S3Y1T0_HETAK (Galactinol--sucrose galactosyltransferase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1T0_HETAK) HSP 1 Score: 167 bits (422), Expect = 3.930e-46 Identity = 75/115 (65.22%), Postives = 87/115 (75.65%), Query Frame = 1
Query: 13 LPACYGRRPVIRGSDDFYPRDNLSHSPHIYANAFNGLMISNCGLQDWDMFQTGIGEASWMHAAARAVSGGPVYISDRPGEHNTEILRRMVLEDGSVLKPPSNALPCLKSLFVDPQ 357
L Y RP++RGSDD YPRD SH PH+Y NAFN L++S GLQDWDMFQT +G SW+H AARAVSGGPVY+SDRPGEH+ +LRR+VL G VL+ NALP L SLF DPQ
Sbjct: 278 LAGLYEHRPLVRGSDDHYPRDPASHGPHLYFNAFNALLVSFVGLQDWDMFQTALGPGSWLHGAARAVSGGPVYVSDRPGEHDAALLRRLVLPGGGVLRSAHNALPVLGSLFEDPQ 392
BLAST of mRNA_H-paniculata_contig4746.11790.1 vs. uniprot
Match: A0A836CJ91_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ91_9STRA) HSP 1 Score: 164 bits (415), Expect = 6.410e-46 Identity = 77/113 (68.14%), Postives = 90/113 (79.65%), Query Frame = 1
Query: 28 GRRPVIRGSDDFYPRDNLSHSPHIYANAFNGLMISNCG-LQDWDMFQTGIGEASWMHAAARAVSGGPVYISDRPGEHNTEILRRMVLEDGSVLKPPSNALPCLKSLFVDPQRD 363
G RP++RGSDDFYPRD SH HIYANAFN L+++ CG LQDWDMFQT +G MHAAARA+SGGPVYISDRPGEH+ ++R+MVLEDGSV + +ALP L SLFVD Q D
Sbjct: 188 GVRPIVRGSDDFYPRDPASHGTHIYANAFNALLLAYCGALQDWDMFQTSLGAVGAMHAAARAISGGPVYISDRPGEHDAALIRKMVLEDGSVPRARRSALPTLPSLFVDAQHD 300
BLAST of mRNA_H-paniculata_contig4746.11790.1 vs. uniprot
Match: D8LQ35_ECTSI (Galactinol--sucrose galactosyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ35_ECTSI) HSP 1 Score: 165 bits (417), Expect = 6.820e-45 Identity = 78/133 (58.65%), Postives = 96/133 (72.18%), Query Frame = 1
Query: 19 ACYGR-RPVIRGSDDFYPRDNLSHSPHIYANAFNGLMISNCGLQDWDMFQTGIG-----------------EASWMHAAARAVSGGPVYISDRPGEHNTEILRRMVLEDGSVLKPPSNALPCLKSLFVDPQRD 363
AC R VIRGSDDFYPR++LSH PH+Y+N+FN L++SN G+QDWDMFQTG+G ASW HAAARA+SGGPVY+SDRPG+HN +ILR++VLEDGSV + +NALP L L DPQ +
Sbjct: 469 ACVSEDRAVIRGSDDFYPREDLSHGPHLYSNSFNALLLSNLGVQDWDMFQTGLGVQGTGDAAGAAGLSEGANASWFHAAARAISGGPVYVSDRPGQHNADILRKLVLEDGSVPRASTNALPTLDCLMRDPQEE 601
BLAST of mRNA_H-paniculata_contig4746.11790.1 vs. uniprot
Match: A0A835YGP5_9STRA (Galactinol--sucrose galactosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YGP5_9STRA) HSP 1 Score: 150 bits (380), Expect = 7.180e-40 Identity = 68/108 (62.96%), Postives = 81/108 (75.00%), Query Frame = 1
Query: 13 LPACYGRRPVIRGSDDFYPRDNLSHSPHIYANAFNGLMISNCGLQ----------------DWDMFQTGIGEASWMHAAARAVSGGPVYISDRPGEHNTEILRRMVLE 288
LP+CY RRP+IRGSDDFYPRD SH H+Y+NAFN L+I +CGLQ DWDMFQT +G SWMHAA+RA+SGGPVYISDRPG H+T+IL+R+VLE
Sbjct: 686 LPSCYARRPLIRGSDDFYPRDEASHGSHLYSNAFNALLIGHCGLQAKALDGFTHHALAGLRDWDMFQTTLGPVSWMHAASRAISGGPVYISDRPGAHDTDILKRIVLE 793
BLAST of mRNA_H-paniculata_contig4746.11790.1 vs. uniprot
Match: UPI00200E406E (hypothetical protein n=1 Tax=Escherichia coli TaxID=562 RepID=UPI00200E406E) HSP 1 Score: 119 bits (299), Expect = 2.060e-31 Identity = 57/114 (50.00%), Postives = 76/114 (66.67%), Query Frame = 1
Query: 22 CYGRRPVIRGSDDFYPRDNLSHSPHIYANAFNGLMISNCGLQDWDMFQTGIGEASWMHAAARAVSGGPVYISDRPGEHNTEILRRMVLEDGSVLKPPSNALPCLKSLFVDPQRD 363
C + V+R SDDFYPRD +SH+ HI A A+N + + DWDMF + + A+ HA+ARA+SGGPVY+SD PG+HN E+L+++VL DGSVL+ P LF DP RD
Sbjct: 47 CSKQTAVVRASDDFYPRDPVSHTIHIAAVAYNSVFLGEIMQPDWDMFHS-VHPAAEYHASARAISGGPVYVSDEPGKHNFELLKKLVLPDGSVLRACLPGRPTCDCLFCDPARD 159
BLAST of mRNA_H-paniculata_contig4746.11790.1 vs. uniprot
Match: A0A2I0X2S9_9ASPA (Galactinol--sucrose galactosyltransferase n=1 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0X2S9_9ASPA) HSP 1 Score: 124 bits (311), Expect = 1.390e-30 Identity = 58/120 (48.33%), Postives = 79/120 (65.83%), Query Frame = 1
Query: 4 HGQLPACYGRRPVIRGSDDFYPRDNLSHSPHIYANAFNGLMISNCGLQDWDMFQTGIGEASWMHAAARAVSGGPVYISDRPGEHNTEILRRMVLEDGSVLKPPSNALPCLKSLFVDPQRD 363
H C + V+R SDDFYPRD++SH+ HI + AFN + + + DWDMF + + A HA+ARA+SGGPVY+SD PG+HN E+LR++VL DGS+L+ P + LF DP RD
Sbjct: 472 HTDALYCAKQTAVVRASDDFYPRDSMSHTIHIASVAFNNVFLGEFMVPDWDMFHS-LHPAGEYHASARAISGGPVYVSDAPGKHNFELLRKLVLPDGSILRAQLPGRPTVDCLFTDPARD 590
BLAST of mRNA_H-paniculata_contig4746.11790.1 vs. uniprot
Match: A0A498KEE9_MALDO (Galactinol--sucrose galactosyltransferase n=7 Tax=Maleae TaxID=721813 RepID=A0A498KEE9_MALDO) HSP 1 Score: 123 bits (309), Expect = 2.510e-30 Identity = 60/114 (52.63%), Postives = 78/114 (68.42%), Query Frame = 1
Query: 22 CYGRRPVIRGSDDFYPRDNLSHSPHIYANAFNGLMISNCGLQDWDMFQTGIGEASWMHAAARAVSGGPVYISDRPGEHNTEILRRMVLEDGSVLKPPSNALPCLKSLFVDPQRD 363
C + V+R SDDFYPRD +SH+ HI A A+N + + L DWDMFQ+ + A+ HA+ARAVSGGP+Y+SD PG+HN E+LR++VL DGSVL+ P LF DP RD
Sbjct: 431 CSKQTAVVRASDDFYPRDPVSHTIHIAAVAYNSVFLGEFMLPDWDMFQS-LHPAAEYHASARAVSGGPIYVSDAPGKHNFELLRKLVLPDGSVLRARLPGRPTKDCLFSDPARD 543 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4746.11790.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4746.11790.1 >prot_H-paniculata_contig4746.11790.1 ID=prot_H-paniculata_contig4746.11790.1|Name=mRNA_H-paniculata_contig4746.11790.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=121bp MHGQLPACYGRRPVIRGSDDFYPRDNLSHSPHIYANAFNGLMISNCGLQDback to top mRNA from alignment at H-paniculata_contig4746:221..1759+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4746.11790.1 ID=mRNA_H-paniculata_contig4746.11790.1|Name=mRNA_H-paniculata_contig4746.11790.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1539bp|location=Sequence derived from alignment at H-paniculata_contig4746:221..1759+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4746:221..1759+ >mRNA_H-paniculata_contig4746.11790.1 ID=mRNA_H-paniculata_contig4746.11790.1|Name=mRNA_H-paniculata_contig4746.11790.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=726bp|location=Sequence derived from alignment at H-paniculata_contig4746:221..1759+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |