mRNA_H-paniculata_contig4744.11788.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig4744.11788.1
Unique NamemRNA_H-paniculata_contig4744.11788.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig4744.11788.1 vs. uniprot
Match: D7FHY6_ECTSI (Phosphatidylinositol 3-kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHY6_ECTSI)

HSP 1 Score: 128 bits (322), Expect = 9.690e-33
Identity = 56/73 (76.71%), Postives = 62/73 (84.93%), Query Frame = 1
Query:    1 CACARKLGIGDRHLDNIMLLPAGNLFHIDFGYIFGREPKPMAPPFRFTREMADAMGGVNSEDYKLFKTYCCQV 219
            C     LGIGDRHLDNIM+LP GNLFHIDFGYIFGR+ KP A P RFT++MADAMGGVNSEDY++FKTYCCQ 
Sbjct:  886 CVITYLLGIGDRHLDNIMMLPTGNLFHIDFGYIFGRDAKPGATPIRFTQQMADAMGGVNSEDYRMFKTYCCQA 958          
BLAST of mRNA_H-paniculata_contig4744.11788.1 vs. uniprot
Match: A0A812YR71_SYMMI (PikE protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812YR71_SYMMI)

HSP 1 Score: 118 bits (296), Expect = 1.110e-31
Identity = 51/73 (69.86%), Postives = 58/73 (79.45%), Query Frame = 1
Query:    1 CACARKLGIGDRHLDNIMLLPAGNLFHIDFGYIFGREPKPMAPPFRFTREMADAMGGVNSEDYKLFKTYCCQV 219
            C     LGIGDRHLDN+M+   G LFHIDFG+IFGR+PKP+ PPFRFTR+MADAMGG +SE YK FK YCCQ 
Sbjct:   88 CVVTYILGIGDRHLDNVMIRTNGQLFHIDFGFIFGRDPKPLPPPFRFTRQMADAMGGEDSEHYKRFKAYCCQA 160          
BLAST of mRNA_H-paniculata_contig4744.11788.1 vs. uniprot
Match: A0A7R9UE18_9STRA (Phosphatidylinositol 3-kinase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UE18_9STRA)

HSP 1 Score: 118 bits (295), Expect = 4.260e-29
Identity = 52/73 (71.23%), Postives = 58/73 (79.45%), Query Frame = 1
Query:    1 CACARKLGIGDRHLDNIMLLPAGNLFHIDFGYIFGREPKPMAPPFRFTREMADAMGGVNSEDYKLFKTYCCQV 219
            C     LG+GDRHLDNIML  AGNLFH+DFG+IFGR+PKP+ PPFRFTREMA+AMGG  SE Y  FKTY CQ 
Sbjct:  707 CVITYILGVGDRHLDNIMLQTAGNLFHLDFGFIFGRDPKPLPPPFRFTREMAEAMGGEQSEHYARFKTYMCQA 779          
BLAST of mRNA_H-paniculata_contig4744.11788.1 vs. uniprot
Match: A0A7S0FRS7_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FRS7_9STRA)

HSP 1 Score: 110 bits (275), Expect = 2.790e-28
Identity = 47/73 (64.38%), Postives = 56/73 (76.71%), Query Frame = 1
Query:    1 CACARKLGIGDRHLDNIMLLPAGNLFHIDFGYIFGREPKPMAPPFRFTREMADAMGGVNSEDYKLFKTYCCQV 219
            C     LG+GDRHLDNIMLLP+G+ FHIDFG+IFGR+PKP+ P FR TREM D MGGV+S DY  F++  CQ 
Sbjct:   77 CVITYLLGVGDRHLDNIMLLPSGHFFHIDFGFIFGRDPKPLPPAFRLTREMVDGMGGVDSADYARFRSLSCQA 149          
BLAST of mRNA_H-paniculata_contig4744.11788.1 vs. uniprot
Match: A0A7S0PHI9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus aporus TaxID=1398097 RepID=A0A7S0PHI9_9STRA)

HSP 1 Score: 112 bits (280), Expect = 7.770e-28
Identity = 48/73 (65.75%), Postives = 56/73 (76.71%), Query Frame = 1
Query:    1 CACARKLGIGDRHLDNIMLLPAGNLFHIDFGYIFGREPKPMAPPFRFTREMADAMGGVNSEDYKLFKTYCCQV 219
            C     +G+GDRHLDNIMLL  G LFHIDFG+IFGR+PKP+ PPFR TREM DAMGGV S +Y+LF +  CQ 
Sbjct:  241 CVITYLMGVGDRHLDNIMLLQTGQLFHIDFGFIFGRDPKPLPPPFRLTREMVDAMGGVESNEYRLFCSLACQA 313          
BLAST of mRNA_H-paniculata_contig4744.11788.1 vs. uniprot
Match: UPI0018F0CFE4 (hypothetical protein n=1 Tax=Vibrio cholerae TaxID=666 RepID=UPI0018F0CFE4)

HSP 1 Score: 104 bits (259), Expect = 1.060e-27
Identity = 43/70 (61.43%), Postives = 53/70 (75.71%), Query Frame = 1
Query:    1 CACARKLGIGDRHLDNIMLLPAGNLFHIDFGYIFGREPKPMAPPFRFTREMADAMGGVNSEDYKLFKTYC 210
            C     LGIGDRHLDN++L   G LFH+DFG+I GR+PKP APP + +REM DAMGG NS+ Y+LF+T C
Sbjct:    5 CVITYLLGIGDRHLDNLLLTKTGKLFHVDFGFILGRDPKPFAPPMKLSREMVDAMGGTNSDHYQLFRTIC 74          
BLAST of mRNA_H-paniculata_contig4744.11788.1 vs. uniprot
Match: A0A7S2SDT7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SDT7_9STRA)

HSP 1 Score: 107 bits (266), Expect = 2.510e-27
Identity = 45/73 (61.64%), Postives = 55/73 (75.34%), Query Frame = 1
Query:    1 CACARKLGIGDRHLDNIMLLPAGNLFHIDFGYIFGREPKPMAPPFRFTREMADAMGGVNSEDYKLFKTYCCQV 219
            C     LG+GDRHLDNIMLLP+G+ FHIDFG+IFGR+PKP+ P FR TREM D MGG +S +Y+ F +  CQ 
Sbjct:   43 CVITYLLGVGDRHLDNIMLLPSGHFFHIDFGFIFGRDPKPLPPAFRLTREMVDGMGGTDSAEYRQFCSLACQA 115          
BLAST of mRNA_H-paniculata_contig4744.11788.1 vs. uniprot
Match: A0A7S1ZII3_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZII3_TRICV)

HSP 1 Score: 107 bits (268), Expect = 3.350e-27
Identity = 46/73 (63.01%), Postives = 54/73 (73.97%), Query Frame = 1
Query:    1 CACARKLGIGDRHLDNIMLLPAGNLFHIDFGYIFGREPKPMAPPFRFTREMADAMGGVNSEDYKLFKTYCCQV 219
            C     LG+GDRHLDNIMLLP G+ FHIDFG+IFGR+PKP+ P FR TREM D MGG +S +YK F +  CQ 
Sbjct:  119 CVITYLLGVGDRHLDNIMLLPTGHFFHIDFGFIFGRDPKPLPPAFRLTREMVDGMGGTDSPEYKRFCSLACQA 191          
BLAST of mRNA_H-paniculata_contig4744.11788.1 vs. uniprot
Match: A0A7S3XVP8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XVP8_HETAK)

HSP 1 Score: 108 bits (270), Expect = 4.270e-27
Identity = 46/73 (63.01%), Postives = 54/73 (73.97%), Query Frame = 1
Query:    1 CACARKLGIGDRHLDNIMLLPAGNLFHIDFGYIFGREPKPMAPPFRFTREMADAMGGVNSEDYKLFKTYCCQV 219
            C     LGIGDRHLDN+M+LP G LFHIDFG+I GR+PKP+ PPFR T EMA AMGG     Y+ F++YCCQ 
Sbjct:  128 CVVTYLLGIGDRHLDNLMMLPDGRLFHIDFGWILGRDPKPLPPPFRLTAEMAAAMGGAAGAPYRAFQSYCCQA 200          
BLAST of mRNA_H-paniculata_contig4744.11788.1 vs. uniprot
Match: A0A7S3HBK6_9STRA (Phosphatidylinositol 3-kinase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HBK6_9STRA)

HSP 1 Score: 111 bits (278), Expect = 8.440e-27
Identity = 48/72 (66.67%), Postives = 56/72 (77.78%), Query Frame = 1
Query:    1 CACARKLGIGDRHLDNIMLLPAGNLFHIDFGYIFGREPKPMAPPFRFTREMADAMGGVNSEDYKLFKTYCCQ 216
            C     LGIGDRHLDNIM+  +G +FHIDFG+IFG++PKPM PPFRF R MADAMGG   E+Y  FKT+CCQ
Sbjct:  817 CVITYILGIGDRHLDNIMINTSGQMFHIDFGFIFGQDPKPMPPPFRFIRAMADAMGGEEGENYARFKTFCCQ 888          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4744.11788.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHY6_ECTSI9.690e-3376.71Phosphatidylinositol 3-kinase n=1 Tax=Ectocarpus s... [more]
A0A812YR71_SYMMI1.110e-3169.86PikE protein n=1 Tax=Symbiodinium microadriaticum ... [more]
A0A7R9UE18_9STRA4.260e-2971.23Phosphatidylinositol 3-kinase n=1 Tax=Pinguiococcu... [more]
A0A7S0FRS7_9STRA2.790e-2864.38Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A7S0PHI9_9STRA7.770e-2865.75Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
UPI0018F0CFE41.060e-2761.43hypothetical protein n=1 Tax=Vibrio cholerae TaxID... [more]
A0A7S2SDT7_9STRA2.510e-2761.64Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A7S1ZII3_TRICV3.350e-2763.01Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A7S3XVP8_HETAK4.270e-2763.01Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3HBK6_9STRA8.440e-2766.67Phosphatidylinositol 3-kinase n=1 Tax=Spumella elo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4744contigH-paniculata_contig4744:14299..14544 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score129.4
Seed ortholog evalue7.6e-28
Seed eggNOG ortholog2880.D7FHY6
KEGG rclassRC00002,RC00078
KEGG koko:K00914
KEGG ReactionR03362
KEGG Pathwayko00562,ko01100,ko04070,ko04136,ko04138,ko04140,ko04145,ko04371,ko05152,ko05167,map00562,map01100,map04070,map04136,map04138,map04140,map04145,map04371,map05152,map05167
Hectar predicted targeting categoryother localisation
EggNOG free text desc.phosphatidylinositol kinase activity
EggNOG OGsCOG5032@1,KOG0906@2759
EC2.7.1.137
COG Functional cat.BDLTU
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04131
Exons1
Model size246
Cds size246
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930409.904364-CDS-H-paniculata_contig4744:14298..145441622930409.904364-CDS-H-paniculata_contig4744:14298..14544Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4744 14299..14544 -
1691481279.0969462-CDS-H-paniculata_contig4744:14298..145441691481279.0969462-CDS-H-paniculata_contig4744:14298..14544Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4744 14299..14544 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4744.11788.1prot_H-paniculata_contig4744.11788.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig4744 14299..14544 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig4744.11788.1

>prot_H-paniculata_contig4744.11788.1 ID=prot_H-paniculata_contig4744.11788.1|Name=mRNA_H-paniculata_contig4744.11788.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=82bp
CACARKLGIGDRHLDNIMLLPAGNLFHIDFGYIFGREPKPMAPPFRFTRE
MADAMGGVNSEDYKLFKTYCCQVNGRQERTI*
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mRNA from alignment at H-paniculata_contig4744:14299..14544-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig4744.11788.1 ID=mRNA_H-paniculata_contig4744.11788.1|Name=mRNA_H-paniculata_contig4744.11788.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=246bp|location=Sequence derived from alignment at H-paniculata_contig4744:14299..14544- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TGTGCCTGTGCTCGAAAGTTGGGTATCGGCGATCGTCACTTGGACAACAT TATGCTGCTTCCGGCGGGCAACTTGTTTCACATCGACTTTGGCTACATAT TCGGGAGGGAGCCCAAGCCCATGGCCCCTCCGTTCCGCTTCACTCGGGAG ATGGCTGATGCCATGGGCGGCGTGAACTCGGAAGACTACAAGCTCTTCAA GACCTACTGCTGCCAGGTGAACGGAAGACAAGAACGGACAATTTAG
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Coding sequence (CDS) from alignment at H-paniculata_contig4744:14299..14544-

>mRNA_H-paniculata_contig4744.11788.1 ID=mRNA_H-paniculata_contig4744.11788.1|Name=mRNA_H-paniculata_contig4744.11788.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=492bp|location=Sequence derived from alignment at H-paniculata_contig4744:14299..14544- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TGTGCCTGTGCTCGAAAGTTGGGTATCGGCGATCGTCACTTGGACAACAT
TATGCTGCTTCCGGCGGGCAACTTGTTTCACATCGACTTTGGCTACATAT
TCGGGAGGGAGCCCAAGCCCATGGCCCCTCCGTTCCGCTTCACTCGGGAG
ATGGCTGATGCCATGGGCGGCGTGAACTCGGAAGACTACAAGCTCTTCAA
GACCTACTGCTGCCAGGTGAACGGAAGACAAGAACGGACAATTTAGTGTG
CCTGTGCTCGAAAGTTGGGTATCGGCGATCGTCACTTGGACAACATTATG
CTGCTTCCGGCGGGCAACTTGTTTCACATCGACTTTGGCTACATATTCGG
GAGGGAGCCCAAGCCCATGGCCCCTCCGTTCCGCTTCACTCGGGAGATGG
CTGATGCCATGGGCGGCGTGAACTCGGAAGACTACAAGCTCTTCAAGACC
TACTGCTGCCAGGTGAACGGAAGACAAGAACGGACAATTTAG
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