mRNA_H-paniculata_contig4744.11787.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig4744.11787.1
Unique NamemRNA_H-paniculata_contig4744.11787.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig4744.11787.1 vs. uniprot
Match: A0A6H5K341_9PHAE (Phosphatidylinositol 3-kinase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K341_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 2.010e-20
Identity = 47/52 (90.38%), Postives = 49/52 (94.23%), Query Frame = 1 
Query:    1 QAYNWLRKSANLILNLLSLMSDAGISELSTDPVAVLAKVEERFRLDLTDEMV 156
            QAYNWLRKSANLILNLLSLMSDAGIS+LS DPVA LAKVE+ FRLDLTDEMV
Sbjct:  810 QAYNWLRKSANLILNLLSLMSDAGISDLSDDPVAALAKVEDNFRLDLTDEMV 861
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BLAST of mRNA_H-paniculata_contig4744.11787.1 vs. uniprot
Match: D7FHY6_ECTSI (Phosphatidylinositol 3-kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHY6_ECTSI)

HSP 1 Score: 90.5 bits (223), Expect = 6.980e-20
Identity = 46/51 (90.20%), Postives = 48/51 (94.12%), Query Frame = 1 
Query:    1 QAYNWLRKSANLILNLLSLMSDAGISELSTDPVAVLAKVEERFRLDLTDEM 153
            QAYNWLRKSANLILNLLSLMSDAGIS+LS DPVA LAKVE+ FRLDLTDEM
Sbjct:  957 QAYNWLRKSANLILNLLSLMSDAGISDLSDDPVAALAKVEDNFRLDLTDEM 1007
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BLAST of mRNA_H-paniculata_contig4744.11787.1 vs. uniprot
Match: A0A7R9UE18_9STRA (Phosphatidylinositol 3-kinase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UE18_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 3.550e-17
Identity = 41/50 (82.00%), Postives = 45/50 (90.00%), Query Frame = 1 
Query:    1 QAYNWLRKSANLILNLLSLMSDAGISELSTDPVAVLAKVEERFRLDLTDE 150
            QAYNWLRKSANLILN+LSLM+DAGI +L  DP A LAKV+ERFRLDLTDE
Sbjct:  778 QAYNWLRKSANLILNMLSLMADAGIEDLRNDPDATLAKVQERFRLDLTDE 827
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BLAST of mRNA_H-paniculata_contig4744.11787.1 vs. uniprot
Match: A0A5D6YI39_9STRA (Phosphatidylinositol 3-kinase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YI39_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 1.690e-16
Identity = 40/51 (78.43%), Postives = 45/51 (88.24%), Query Frame = 1 
Query:    1 QAYNWLRKSANLILNLLSLMSDAGISELSTDPVAVLAKVEERFRLDLTDEM 153
            QA+NWLRKSA+LILNLLSLM+DAGI ELS DP   L KV+E+FRLDLTDEM
Sbjct:  866 QAFNWLRKSADLILNLLSLMADAGIEELSNDPETTLQKVQEKFRLDLTDEM 916
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BLAST of mRNA_H-paniculata_contig4744.11787.1 vs. uniprot
Match: A0A0W8CJK0_PHYNI (Phosphatidylinositol 3-kinase n=5 Tax=Phytophthora TaxID=4783 RepID=A0A0W8CJK0_PHYNI)

HSP 1 Score: 79.3 bits (194), Expect = 5.890e-16
Identity = 39/50 (78.00%), Postives = 44/50 (88.00%), Query Frame = 1 
Query:    1 QAYNWLRKSANLILNLLSLMSDAGISELSTDPVAVLAKVEERFRLDLTDE 150
            QAYNWLRKSA+LILNLLSLM+D+GI ELS +P   L KVEE+FRLDLTDE
Sbjct:  841 QAYNWLRKSADLILNLLSLMADSGIEELSANPATTLLKVEEKFRLDLTDE 890
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BLAST of mRNA_H-paniculata_contig4744.11787.1 vs. uniprot
Match: H3H3A8_PHYRM (Phosphatidylinositol 3-kinase n=23 Tax=Peronosporaceae TaxID=4777 RepID=H3H3A8_PHYRM)

HSP 1 Score: 79.3 bits (194), Expect = 5.890e-16
Identity = 39/50 (78.00%), Postives = 44/50 (88.00%), Query Frame = 1 
Query:    1 QAYNWLRKSANLILNLLSLMSDAGISELSTDPVAVLAKVEERFRLDLTDE 150
            QAYNWLRKSA+LILNLLSLM+D+GI ELS +P   L KVEE+FRLDLTDE
Sbjct:  880 QAYNWLRKSADLILNLLSLMADSGIEELSANPATTLLKVEEKFRLDLTDE 929
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BLAST of mRNA_H-paniculata_contig4744.11787.1 vs. uniprot
Match: K3X9V2_GLOUD (Phosphatidylinositol 3-kinase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X9V2_GLOUD)

HSP 1 Score: 79.0 bits (193), Expect = 8.040e-16
Identity = 39/50 (78.00%), Postives = 44/50 (88.00%), Query Frame = 1 
Query:    1 QAYNWLRKSANLILNLLSLMSDAGISELSTDPVAVLAKVEERFRLDLTDE 150
            QA+NWLRKSA+LILNLLSLM+DAGI ELS DP   L KV+E+FRLDLTDE
Sbjct:  934 QAFNWLRKSADLILNLLSLMADAGIEELSNDPETTLQKVQEKFRLDLTDE 983
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BLAST of mRNA_H-paniculata_contig4744.11787.1 vs. uniprot
Match: F0X0S3_9STRA (Phosphatidylinositol 3-kinase n=2 Tax=Albugo TaxID=65356 RepID=F0X0S3_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 1.500e-15
Identity = 39/50 (78.00%), Postives = 43/50 (86.00%), Query Frame = 1 
Query:    1 QAYNWLRKSANLILNLLSLMSDAGISELSTDPVAVLAKVEERFRLDLTDE 150
            QAYNWLRKSA+LILNLLSLM DAGI EL+ DP   L KV+E+FRLDLTDE
Sbjct:  933 QAYNWLRKSADLILNLLSLMIDAGIEELTNDPETTLQKVQEKFRLDLTDE 982
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BLAST of mRNA_H-paniculata_contig4744.11787.1 vs. uniprot
Match: A0A836CGT8_9STRA (Phosphatidylinositol 3-kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGT8_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 3.820e-15
Identity = 39/49 (79.59%), Postives = 43/49 (87.76%), Query Frame = 1 
Query:    4 AYNWLRKSANLILNLLSLMSDAGISELSTDPVAVLAKVEERFRLDLTDE 150
            AY WLRKSA+LILNLL+LM DAGI  LSTDPVAVL +V ERFRLDL+DE
Sbjct:  544 AYTWLRKSAHLILNLLNLMVDAGIESLSTDPVAVLGRVAERFRLDLSDE 592
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BLAST of mRNA_H-paniculata_contig4744.11787.1 vs. uniprot
Match: A0A2D4C1P5_PYTIN (Phosphatidylinositol 3-kinase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C1P5_PYTIN)

HSP 1 Score: 76.3 bits (186), Expect = 7.140e-15
Identity = 38/50 (76.00%), Postives = 42/50 (84.00%), Query Frame = 1 
Query:    1 QAYNWLRKSANLILNLLSLMSDAGISELSTDPVAVLAKVEERFRLDLTDE 150
            QAYNWLRKSA+LILNLLSLM+D GI  LS DP   L KV+E+FRLDLTDE
Sbjct:  985 QAYNWLRKSADLILNLLSLMADGGIEMLSNDPETTLQKVQEKFRLDLTDE 1034
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4744.11787.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K341_9PHAE2.010e-2090.38Phosphatidylinositol 3-kinase n=1 Tax=Ectocarpus s... [more]
D7FHY6_ECTSI6.980e-2090.20Phosphatidylinositol 3-kinase n=1 Tax=Ectocarpus s... [more]
A0A7R9UE18_9STRA3.550e-1782.00Phosphatidylinositol 3-kinase n=1 Tax=Pinguiococcu... [more]
A0A5D6YI39_9STRA1.690e-1678.43Phosphatidylinositol 3-kinase n=1 Tax=Pythium bras... [more]
A0A0W8CJK0_PHYNI5.890e-1678.00Phosphatidylinositol 3-kinase n=5 Tax=Phytophthora... [more]
H3H3A8_PHYRM5.890e-1678.00Phosphatidylinositol 3-kinase n=23 Tax=Peronospora... [more]
K3X9V2_GLOUD8.040e-1678.00Phosphatidylinositol 3-kinase n=1 Tax=Globisporang... [more]
F0X0S3_9STRA1.500e-1578.00Phosphatidylinositol 3-kinase n=2 Tax=Albugo TaxID... [more]
A0A836CGT8_9STRA3.820e-1579.59Phosphatidylinositol 3-kinase n=1 Tax=Tribonema mi... [more]
A0A2D4C1P5_PYTIN7.140e-1576.00Phosphatidylinositol 3-kinase n=1 Tax=Pythium insi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4744contigH-paniculata_contig4744:13139..13300 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score90.5
Seed ortholog evalue2.6e-16
Seed eggNOG ortholog2880.D7FHY6
KEGG rclassRC00002,RC00078
KEGG koko:K00914
KEGG ReactionR03362
KEGG Pathwayko00562,ko01100,ko04070,ko04136,ko04138,ko04140,ko04145,ko04371,ko05152,ko05167,map00562,map01100,map04070,map04136,map04138,map04140,map04145,map04371,map05152,map05167
Hectar predicted targeting categoryno signal peptide or anchor
EggNOG free text desc.phosphatidylinositol kinase activity
EggNOG OGsCOG5032@1,KOG0906@2759
EC2.7.1.137
COG Functional cat.BDLTU
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04131
Exons1
Model size162
Cds size162
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930409.8619487-CDS-H-paniculata_contig4744:13138..133001622930409.8619487-CDS-H-paniculata_contig4744:13138..13300Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4744 13139..13300 -
1691481279.0848193-CDS-H-paniculata_contig4744:13138..133001691481279.0848193-CDS-H-paniculata_contig4744:13138..13300Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4744 13139..13300 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4744.11787.1prot_H-paniculata_contig4744.11787.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig4744 13139..13300 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig4744.11787.1

>prot_H-paniculata_contig4744.11787.1 ID=prot_H-paniculata_contig4744.11787.1|Name=mRNA_H-paniculata_contig4744.11787.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=54bp
QAYNWLRKSANLILNLLSLMSDAGISELSTDPVAVLAKVEERFRLDLTDE
MVRI
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mRNA from alignment at H-paniculata_contig4744:13139..13300-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig4744.11787.1 ID=mRNA_H-paniculata_contig4744.11787.1|Name=mRNA_H-paniculata_contig4744.11787.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=162bp|location=Sequence derived from alignment at H-paniculata_contig4744:13139..13300- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGGCGTACAACTGGCTTCGCAAGAGTGCCAATCTTATTCTCAACCTGCT
GAGTCTCATGTCGGACGCGGGTATATCTGAGCTGTCGACCGACCCAGTGG
CCGTGTTAGCCAAGGTGGAGGAGAGGTTCCGCCTCGACCTTACGGATGAA
ATGGTGCGTATC
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Coding sequence (CDS) from alignment at H-paniculata_contig4744:13139..13300-

>mRNA_H-paniculata_contig4744.11787.1 ID=mRNA_H-paniculata_contig4744.11787.1|Name=mRNA_H-paniculata_contig4744.11787.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=324bp|location=Sequence derived from alignment at H-paniculata_contig4744:13139..13300- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGGCGTACAACTGGCTTCGCAAGAGTGCCAATCTTATTCTCAACCTGCT
GAGTCTCATGTCGGACGCGGGTATATCTGAGCTGTCGACCGACCCAGTGG
CCGTGTTAGCCAAGGTGGAGGAGAGGTTCCGCCTCGACCTTACGGATGAA
ATGGTGCGTATCCAGGCGTACAACTGGCTTCGCAAGAGTGCCAATCTTAT
TCTCAACCTGCTGAGTCTCATGTCGGACGCGGGTATATCTGAGCTGTCGA
CCGACCCAGTGGCCGTGTTAGCCAAGGTGGAGGAGAGGTTCCGCCTCGAC
CTTACGGATGAAATGGTGCGTATC
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