mRNA_H-paniculata_contig47420.11784.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig47420.11784.1 vs. uniprot
Match: D7FLI2_ECTSI (1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLI2_ECTSI) HSP 1 Score: 160 bits (404), Expect = 1.000e-43 Identity = 73/93 (78.49%), Postives = 82/93 (88.17%), Query Frame = 1
Query: 1 AEDDIEMPFTRYRLALKYPICWCLRFQTFLFGFWWIRTKGECASKQEAPIIVSNHVSPFEPFYLVGKTMATPVQRIEDSRAPIVGTIQKAMQV 279
+E+ E PF+++R ALK+PICWCLRFQ LFGFWWI KGECA K++APIIVSNHVSPFEPFYLV KT ATPVQRIEDSRAPIVGTIQKAMQ+
Sbjct: 151 SEEGREKPFSKWRRALKHPICWCLRFQCALFGFWWISVKGECADKEDAPIIVSNHVSPFEPFYLVSKTQATPVQRIEDSRAPIVGTIQKAMQI 243
BLAST of mRNA_H-paniculata_contig47420.11784.1 vs. uniprot
Match: A0A6H5KRC5_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRC5_9PHAE) HSP 1 Score: 160 bits (404), Expect = 1.310e-43 Identity = 73/93 (78.49%), Postives = 82/93 (88.17%), Query Frame = 1
Query: 1 AEDDIEMPFTRYRLALKYPICWCLRFQTFLFGFWWIRTKGECASKQEAPIIVSNHVSPFEPFYLVGKTMATPVQRIEDSRAPIVGTIQKAMQV 279
+E+ E PF+++R ALK+PICWCLRFQ LFGFWWI KGECA K++APIIVSNHVSPFEPFYLV KT ATPVQRIEDSRAPIVGTIQKAMQ+
Sbjct: 153 SEEGREKPFSKWRRALKHPICWCLRFQCTLFGFWWISVKGECADKEDAPIIVSNHVSPFEPFYLVSKTQATPVQRIEDSRAPIVGTIQKAMQI 245
BLAST of mRNA_H-paniculata_contig47420.11784.1 vs. uniprot
Match: A0A835YMY3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMY3_9STRA) HSP 1 Score: 105 bits (262), Expect = 2.120e-24 Identity = 50/86 (58.14%), Postives = 59/86 (68.60%), Query Frame = 1
Query: 22 PFTRYRLALKYPICWCLRFQTFLFGFWWIRTKGECASKQEAPIIVSNHVSPFEPFYLVGKTMATPVQRIEDSRAPIVGTIQKAMQV 279
P R R KYP+ WCLR Q +LFGF W+ G K API+VSNHVSPFEP +L+ T ATPVQR EDS PI+G IQ+A+QV
Sbjct: 113 PMGRIRSLFKYPVYWCLRVQLWLFGFLWVNVIGRPLPKHVAPILVSNHVSPFEPLFLIFCTHATPVQRSEDSTTPIIGRIQRALQV 198
BLAST of mRNA_H-paniculata_contig47420.11784.1 vs. uniprot
Match: A0A176W928_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176W928_MARPO) HSP 1 Score: 71.6 bits (174), Expect = 1.660e-12 Identity = 38/96 (39.58%), Postives = 56/96 (58.33%), Query Frame = 1
Query: 1 AEDDIEMPFTRYRLALKYPICWCLRFQTFLFGFWWIRTKGECASKQEAPIIVSNHVSPFEPFYLVGKTMATPVQRIEDSRAPIVGTIQKAMQVRSI 288
A+D ++ PF +R L +P+ + R F GF WI KG+ A + +APIIVSNHV+ +P ++ + + V E+ PI G I KAMQV S+
Sbjct: 218 AKDVLKKPFPAWRRPLLFPVRFFARVLLFACGFQWIHIKGKPAPRDQAPIIVSNHVTFVDPVFIFFRHLPVIVTAQENLSLPIAGAIMKAMQVISV 313
BLAST of mRNA_H-paniculata_contig47420.11784.1 vs. uniprot
Match: UPI001CFA1BCE (lysophospholipid acyltransferase LPEAT2-like n=1 Tax=Mangifera indica TaxID=29780 RepID=UPI001CFA1BCE) HSP 1 Score: 71.2 bits (173), Expect = 2.240e-12 Identity = 39/90 (43.33%), Postives = 51/90 (56.67%), Query Frame = 1
Query: 10 DIEMPFTRYRLALKYPICWCLRFQTFLFGFWWIRTKGECASKQEAPIIVSNHVSPFEPFYLVGKTMATPVQRIEDSRAPIVGTIQKAMQV 279
D + P +R L + +C RF F FG+ WIR KG+ AS++ API+VSNHVS EP + + T V P VGTI +AMQV
Sbjct: 131 DKQNPMPLWRSRLMWVTRFCARFILFSFGYQWIRRKGKPASREIAPIVVSNHVSYIEPIFYFYELFPTIVASESHDSIPFVGTIIRAMQV 220
BLAST of mRNA_H-paniculata_contig47420.11784.1 vs. uniprot
Match: UPI001CF9720D (lysophospholipid acyltransferase LPEAT2-like n=1 Tax=Mangifera indica TaxID=29780 RepID=UPI001CF9720D) HSP 1 Score: 69.3 bits (168), Expect = 1.060e-11 Identity = 38/90 (42.22%), Postives = 51/90 (56.67%), Query Frame = 1
Query: 10 DIEMPFTRYRLALKYPICWCLRFQTFLFGFWWIRTKGECASKQEAPIIVSNHVSPFEPFYLVGKTMATPVQRIEDSRAPIVGTIQKAMQV 279
D + P +R + + +C RF F FG+ WIR KG+ AS++ API+VSNHVS EP + + T V P VGTI +AMQV
Sbjct: 142 DKQNPMPLWRSRVMWVTRFCARFILFSFGYQWIRRKGKPASREIAPIVVSNHVSYIEPIFYFYEFCPTIVASESHDSMPFVGTIIRAMQV 231
BLAST of mRNA_H-paniculata_contig47420.11784.1 vs. uniprot
Match: A0A7I8IFY4_SPIIN (Hypothetical protein n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8IFY4_SPIIN) HSP 1 Score: 67.4 bits (163), Expect = 5.050e-11 Identity = 35/90 (38.89%), Postives = 49/90 (54.44%), Query Frame = 1
Query: 10 DIEMPFTRYRLALKYPICWCLRFQTFLFGFWWIRTKGECASKQEAPIIVSNHVSPFEPFYLVGKTMATPVQRIEDSRAPIVGTIQKAMQV 279
D + P R+R + + C R F FG+ WI+ +G AS++ API+VSNH+S EP + + T V P VGTI +AMQV
Sbjct: 143 DKQSPMPRWRCRIMWITRLCARLILFSFGYHWIKRRGRPASREIAPIVVSNHISYIEPIFFFFELFPTIVASESHDSIPFVGTIIRAMQV 232
BLAST of mRNA_H-paniculata_contig47420.11784.1 vs. uniprot
Match: UPI0009E52F59 (lysophospholipid acyltransferase LPEAT2 n=1 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E52F59) HSP 1 Score: 67.4 bits (163), Expect = 5.090e-11 Identity = 38/90 (42.22%), Postives = 48/90 (53.33%), Query Frame = 1
Query: 10 DIEMPFTRYRLALKYPICWCLRFQTFLFGFWWIRTKGECASKQEAPIIVSNHVSPFEPFYLVGKTMATPVQRIEDSRAPIVGTIQKAMQV 279
D +MP R+R L + C R F FG+ WI G AS++ API+VSNHVS EP + + T V P VGTI +AMQV
Sbjct: 207 DRQMPMPRWRCRLMWVTRICARCILFSFGYHWINRIGRPASREVAPIVVSNHVSYVEPIFFFYELFPTIVASESHDSLPFVGTIIRAMQV 296
BLAST of mRNA_H-paniculata_contig47420.11784.1 vs. uniprot
Match: A0A7S1PHH9_9EUKA (Hypothetical protein n=1 Tax=Percolomonas cosmopolitus TaxID=63605 RepID=A0A7S1PHH9_9EUKA) HSP 1 Score: 67.0 bits (162), Expect = 6.890e-11 Identity = 37/94 (39.36%), Postives = 53/94 (56.38%), Query Frame = 1
Query: 1 AEDDIEM-PFTRYRLALKYPICWCLRFQTFLFGFWWIRTKG-ECASKQEAPIIVSNHVSPFEPFYLVGKTMATPVQRIEDSRAPIVGTIQKAMQ 276
++D++ + P +R L YP R F GF IR G + AS+QEAPII++NHVSPF+PFY+ K + + R E P+ G + A Q
Sbjct: 86 SDDELLLEPLPHWRRVLMYPATVSFRMAMFFMGFHRIRVTGAKPASRQEAPIIIANHVSPFDPFYIGLKHLPMIIARAEQKNTPLFGALFTASQ 179
BLAST of mRNA_H-paniculata_contig47420.11784.1 vs. uniprot
Match: A0A3S3QM27_9MAGN (Lysophospholipid acyltransferase LPEAT2 isoform X2 n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A3S3QM27_9MAGN) HSP 1 Score: 66.6 bits (161), Expect = 9.370e-11 Identity = 37/90 (41.11%), Postives = 48/90 (53.33%), Query Frame = 1
Query: 10 DIEMPFTRYRLALKYPICWCLRFQTFLFGFWWIRTKGECASKQEAPIIVSNHVSPFEPFYLVGKTMATPVQRIEDSRAPIVGTIQKAMQV 279
D + P R+R + + C R F FG+ WIR G AS++ API+VSNHVS EP + + T V P VGTI +AMQV
Sbjct: 106 DKQNPMPRWRCKVMWVTRICTRCILFSFGYHWIRRVGRPASRETAPIVVSNHVSYIEPIFFFYELFPTIVASESHDALPFVGTIIRAMQV 195 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig47420.11784.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig47420.11784.1 >prot_H-paniculata_contig47420.11784.1 ID=prot_H-paniculata_contig47420.11784.1|Name=mRNA_H-paniculata_contig47420.11784.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=90bp MPFTRYRLALKYPICWCLRFQTFLFGFWWIRTKGECASKQEAPIIVSNHVback to top mRNA from alignment at H-paniculata_contig47420:64..1243- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig47420.11784.1 ID=mRNA_H-paniculata_contig47420.11784.1|Name=mRNA_H-paniculata_contig47420.11784.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1180bp|location=Sequence derived from alignment at H-paniculata_contig47420:64..1243- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig47420:64..1243- >mRNA_H-paniculata_contig47420.11784.1 ID=mRNA_H-paniculata_contig47420.11784.1|Name=mRNA_H-paniculata_contig47420.11784.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=540bp|location=Sequence derived from alignment at H-paniculata_contig47420:64..1243- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |