mRNA_H-paniculata_contig4742.11782.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-paniculata_contig4742.11782.1
Unique Name	mRNA_H-paniculata_contig4742.11782.1
Type	mRNA
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)

Homology

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BLAST of mRNA_H-paniculata_contig4742.11782.1 vs. uniprot
Match: A0A7S2UU49_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UU49_9STRA)

HSP 1 Score: 194 bits (493), Expect = 6.890e-55
Identity = 91/157 (57.96%), Postives = 109/157 (69.43%), Query Frame = 2

Query:   11 RGWMQEEDDRLRQAVEKLGERNWRHVAQIVATRTHVQCQQRWKKALRPGLVKGAWSMEEDENLVKLIGEGFSNWSELASHTPGRTAKQCRERWCHHLDPSVNHGNWTMEEDQQLKALQARLGTKWAAIAREMPGRTEHAVKGRVKTLARCERQTSVG 481
            R W   ED+ LR AV K GE NW+ +A+ V TR HVQC QRWKK L+PGLVKG WS  ED  LV L+G+GF NW +LA+  PGRT+KQCRERW HHLDPSV  G +T EED  +  LQ+ LG KW+ IA+ +PGRTE+AVK R K L R  +    G
Sbjct:   28 RKWTLVEDEELRHAVRKYGESNWKDIAREVGTRNHVQCLQRWKKVLKPGLVKGQWSALEDAKLVDLVGKGFKNWGQLAAQMPGRTSKQCRERWSHHLDPSVKKGEYTTEEDNTILRLQSELGNKWSEIAKHLPGRTENAVKIRWKALDRLRQNAGSG 184

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BLAST of mRNA_H-paniculata_contig4742.11782.1 vs. uniprot
Match: A0A418B0H6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418B0H6_9STRA)

HSP 1 Score: 192 bits (487), Expect = 2.820e-52
Identity = 87/154 (56.49%), Postives = 113/154 (73.38%), Query Frame = 2

Query:   11 RGWMQEEDDRLRQAVEKLGERNWRHVAQIVATRTHVQCQQRWKKALRPGLVKGAWSMEEDENLVKLIGEGFSNWSELASHTPGRTAKQCRERWCHHLDPSVNHGNWTMEEDQQLKALQARLGTKWAAIAREMPGRTEHAVKGRVKTLARCERQT 472
            R W + ED+ LR AVE+ GERNW+ +A  VA R H QC QRW K L+PGL+KG W+ EED  L  L+ EG  NW ++ASH PGRT+KQCRERWC+HLDP++N GN+T EEDQ +  +QA+LG +W+ IA+++ GRTE AVK R K+L R  R +
Sbjct:  109 RRWSKAEDESLRLAVERSGERNWKAIADQVAGRNHTQCLQRWTKVLKPGLIKGHWTPEEDAKLRTLVAEGRKNWGQVASHIPGRTSKQCRERWCNHLDPNINKGNYTREEDQLIVDMQAKLGNRWSVIAQQLSGRTEDAVKIRWKSLMRTRRSS 262

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BLAST of mRNA_H-paniculata_contig4742.11782.1 vs. uniprot
Match: A0A2P4Y3D9_9STRA (Myb-like DNA-binding protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y3D9_9STRA)

HSP 1 Score: 185 bits (469), Expect = 1.050e-51
Identity = 88/162 (54.32%), Postives = 112/162 (69.14%), Query Frame = 2

Query:   17 WMQEEDDRLRQAVEKLGERNWRHVAQIVATRTHVQCQQRWKKALRPGLVKGAWSMEEDENLVKLIGEGFSNWSELASHTPGRTAKQCRERWCHHLDPSVNHGNWTMEEDQQLKALQARLGTKWAAIAREMPGRTEHAVKGRVKTLARCERQTSVGGVGDIGR 502
            W QEEDD+LR+AV + GERNW+ +A+ V  R H QC QRW K L PGLVKG W  +EDE L +L+ EG  NW ++A+  PGRT+KQCRERW +HLDPS+  G +T EED+ +   QARLG +W+AIA  +PGRTE AVK R K+L R  +     G  D G+
Sbjct:   94 WTQEEDDKLREAVGRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPDEDELLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIVRGEYTQEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRWKSLCRVRKGQGRRGQADKGK 255

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BLAST of mRNA_H-paniculata_contig4742.11782.1 vs. uniprot
Match: A0A024UM09_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UM09_9STRA)

HSP 1 Score: 191 bits (486), Expect = 3.730e-51
Identity = 87/154 (56.49%), Postives = 113/154 (73.38%), Query Frame = 2

Query:   11 RGWMQEEDDRLRQAVEKLGERNWRHVAQIVATRTHVQCQQRWKKALRPGLVKGAWSMEEDENLVKLIGEGFSNWSELASHTPGRTAKQCRERWCHHLDPSVNHGNWTMEEDQQLKALQARLGTKWAAIAREMPGRTEHAVKGRVKTLARCERQT 472
            R W + ED+ LR AVE+ GERNW+ +A  VA R H QC QRW K L+PGL+KG W+ EED  L  L+ EG  NW ++ASH PGRT+KQCRERWC+HLDP++N GN+T EEDQ +  +QA+LG +W+ IA+++ GRTE AVK R K+L R  R +
Sbjct:  109 RRWSKVEDESLRLAVERSGERNWKAIADQVAGRNHTQCLQRWTKVLKPGLIKGHWTPEEDAKLRTLVAEGRKNWGQVASHIPGRTSKQCRERWCNHLDPNINKGNYTREEDQLIVDMQAKLGNRWSVIAQQLSGRTEDAVKIRWKSLMRTRRSS 262

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BLAST of mRNA_H-paniculata_contig4742.11782.1 vs. uniprot
Match: A0A6G0XBC5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XBC5_9STRA)

HSP 1 Score: 190 bits (482), Expect = 5.420e-51
Identity = 86/152 (56.58%), Postives = 112/152 (73.68%), Query Frame = 2

Query:   11 RGWMQEEDDRLRQAVEKLGERNWRHVAQIVATRTHVQCQQRWKKALRPGLVKGAWSMEEDENLVKLIGEGFSNWSELASHTPGRTAKQCRERWCHHLDPSVNHGNWTMEEDQQLKALQARLGTKWAAIAREMPGRTEHAVKGRVKTLARCER 466
            R W + ED+ LR AVE+ GERNW+ +A  V  R H QC QRW K L+PGL+KG W+ EED  L  L+ EG  NW ++ASH PGRT+KQCRERWC+HLDP++N GN+T EEDQ +  +QA+LG +W+ IA+++ GRTE AVK R K+L R +R
Sbjct:   98 RRWSKAEDESLRLAVERSGERNWKAIADQVVGRNHTQCLQRWTKVLKPGLIKGHWTPEEDAKLRALVAEGRKNWGQVASHIPGRTSKQCRERWCNHLDPNINKGNYTREEDQLIIDMQAKLGNRWSVIAQQLTGRTEDAVKIRWKSLMRTKR 249

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BLAST of mRNA_H-paniculata_contig4742.11782.1 vs. uniprot
Match: H3G911_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G911_PHYRM)

HSP 1 Score: 177 bits (448), Expect = 1.370e-50
Identity = 81/150 (54.00%), Postives = 107/150 (71.33%), Query Frame = 2

Query:   17 WMQEEDDRLRQAVEKLGERNWRHVAQIVATRTHVQCQQRWKKALRPGLVKGAWSMEEDENLVKLIGEGFSNWSELASHTPGRTAKQCRERWCHHLDPSVNHGNWTMEEDQQLKALQARLGTKWAAIAREMPGRTEHAVKGRVKTLARCER 466
            W  EED++LR+AV + GERNW+ +A+ V  R H QC QRW K L PGLVKG W  +ED+ L +L+ EG  NW ++A+  PGRT+KQCRERW +HLDPS+  G ++ EED+ +   QARLG +W+AIA  +PGRTE AVK R K+L R  +
Sbjct:   12 WTPEEDEKLREAVNRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPDEDDLLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIVRGEYSAEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRWKSLCRVRK 161

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BLAST of mRNA_H-paniculata_contig4742.11782.1 vs. uniprot
Match: D0NJN5_PHYIT (Myb-like DNA-binding protein, putative n=2 Tax=Phytophthora TaxID=4783 RepID=D0NJN5_PHYIT)

HSP 1 Score: 178 bits (452), Expect = 3.380e-50
Identity = 83/150 (55.33%), Postives = 107/150 (71.33%), Query Frame = 2

Query:   17 WMQEEDDRLRQAVEKLGERNWRHVAQIVATRTHVQCQQRWKKALRPGLVKGAWSMEEDENLVKLIGEGFSNWSELASHTPGRTAKQCRERWCHHLDPSVNHGNWTMEEDQQLKALQARLGTKWAAIAREMPGRTEHAVKGRVKTLARCER 466
            W  EEDD+LR+AV + GERNW+ +A+ V  R H QC QRW K L PGLVKG W  EED+ L +L+ EG  NW ++A+  PGRT+KQCRERW +HLDPS+  G ++ EED+ +   QARLG +W+AIA  +PGRTE AVK R K+L R  +
Sbjct:   85 WTPEEDDKLREAVGRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPEEDDLLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIIRGEYSPEEDRMILDAQARLGNRWSAIAAMLPGRTEDAVKIRWKSLCRVRK 234

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BLAST of mRNA_H-paniculata_contig4742.11782.1 vs. uniprot
Match: A0A6H5K458_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K458_9PHAE)

HSP 1 Score: 184 bits (467), Expect = 1.080e-49
Identity = 85/149 (57.05%), Postives = 105/149 (70.47%), Query Frame = 2

Query:   11 RGWMQEEDDRLRQAVEKLGERNWRHVAQIVATRTHVQCQQRWKKALRPGLVKGAWSMEEDENLVKLIGEGFSNWSELASHTPGRTAKQCRERWCHHLDPSVNHGNWTMEEDQQLKALQARLGTKWAAIAREMPGRTEHAVKGRVKTLAR 457
            R W  EED+RLR AVE+    +W+ +A  V TR HVQC QRWKK L PGLVKG W+ EED+ LV ++ EG  NW  L++  PGRT+KQCRERWCHHLDP +  G WT EEDQ + +LQ ++G KWA IA+ + GRTE+A K R K L R
Sbjct:   69 RRWSPEEDERLRAAVERYHGTSWKEIAAEVKTRNHVQCLQRWKKVLTPGLVKGQWTPEEDKLLVSIVNEGHKNWGSLSARVPGRTSKQCRERWCHHLDPRIVKGGWTEEEDQIIVSLQQQMGNKWAKIAQHLDGRTENATKIRWKILER 217

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BLAST of mRNA_H-paniculata_contig4742.11782.1 vs. uniprot
Match: M4C2C4_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C2C4_HYAAE)

HSP 1 Score: 183 bits (465), Expect = 1.980e-49
Identity = 85/147 (57.82%), Postives = 109/147 (74.15%), Query Frame = 2

Query:   17 WMQEEDDRLRQAVEKLGERNWRHVAQIVATRTHVQCQQRWKKALRPGLVKGAWSMEEDENLVKLIGEGFSNWSELASHTPGRTAKQCRERWCHHLDPSVNHGNWTMEEDQQLKALQARLGTKWAAIAREMPGRTEHAVKGRVKTLAR 457
            WMQEED++LR+AV + GERNW+ +A+ V  R H QC QRW K L PGLVKG W  +EDE L +L+ EG  NW ++A+  PGRT+KQCRERW +HLDPS+  G +T+EED+ +   QARLG +W+AIA  +PGRTE AVK R K+L R
Sbjct:  118 WMQEEDEKLREAVGRHGERNWKSIAEEVPGRNHTQCLQRWTKVLAPGLVKGHWRPDEDELLKELVAEGRKNWGQVATRIPGRTSKQCRERWYNHLDPSIIRGEYTVEEDRMILDAQARLGNRWSAIATMLPGRTEDAVKIRWKSLCR 264

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BLAST of mRNA_H-paniculata_contig4742.11782.1 vs. uniprot
Match: W4GZ24_9STRA (Uncharacterized protein n=12 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GZ24_9STRA)

HSP 1 Score: 186 bits (471), Expect = 3.550e-49
Identity = 84/154 (54.55%), Postives = 110/154 (71.43%), Query Frame = 2

Query:   11 RGWMQEEDDRLRQAVEKLGERNWRHVAQIVATRTHVQCQQRWKKALRPGLVKGAWSMEEDENLVKLIGEGFSNWSELASHTPGRTAKQCRERWCHHLDPSVNHGNWTMEEDQQLKALQARLGTKWAAIAREMPGRTEHAVKGRVKTLARCERQT 472
            R W + ED+ LR AVE+ GERNW+ +A  V  R H QC QRW K L+PGL+KG W+ EED  L  L+ EG  NW ++A   PGRT+KQCRERWC+HLDP++N GN+T EEDQ +  +QA+LG +W+ IA+++ GRTE AVK R K+L R  R +
Sbjct:  110 RRWSKAEDESLRVAVERSGERNWKAIADQVVGRNHTQCLQRWTKVLKPGLIKGHWTPEEDAKLRALVAEGRKNWGQVAGQIPGRTSKQCRERWCNHLDPNINKGNYTREEDQVIVDMQAKLGNRWSVIAQQLTGRTEDAVKIRWKSLMRTRRSS 263

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig4742.11782.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig4742.11782.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A7S2UU49_9STRA	6.890e-55	57.96	Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa...	[more]
A0A418B0H6_9STRA	2.820e-52	56.49	Uncharacterized protein n=1 Tax=Aphanomyces invada...	[more]
A0A2P4Y3D9_9STRA	1.050e-51	54.32	Myb-like DNA-binding protein (Fragment) n=1 Tax=Ph...	[more]
A0A024UM09_9STRA	3.730e-51	56.49	Uncharacterized protein n=2 Tax=Aphanomyces invada...	[more]
A0A6G0XBC5_9STRA	5.420e-51	56.58	Uncharacterized protein n=1 Tax=Aphanomyces euteic...	[more]
H3G911_PHYRM	1.370e-50	54.00	Uncharacterized protein n=1 Tax=Phytophthora ramor...	[more]
D0NJN5_PHYIT	3.380e-50	55.33	Myb-like DNA-binding protein, putative n=2 Tax=Phy...	[more]
A0A6H5K458_9PHAE	1.080e-49	57.05	MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta...	[more]
M4C2C4_HYAAE	1.980e-49	57.82	Uncharacterized protein n=1 Tax=Hyaloperonospora a...	[more]
W4GZ24_9STRA	3.550e-49	54.55	Uncharacterized protein n=12 Tax=Aphanomyces astac...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig4742	contig	H-paniculata_contig4742:114..8515 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	186.8
Seed ortholog evalue	1.9e-44
Seed eggNOG ortholog	157072.XP_008863559.1
Hectar predicted targeting category	other localisation
EggNOG free text desc.	RNA polymerase II transcription regulator recruiting activity
EggNOG OGs	COG5147@1,KOG0048@2759
COG Functional cat.	ADK
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
Exons	8
Model size	1212
Cds size	1191
Stop	0
Start	1

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622930409.292668-UTR-H-paniculata_contig4742:113..132	1622930409.292668-UTR-H-paniculata_contig4742:113..132	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig4742 114..132 +
1691481278.7706366-UTR-H-paniculata_contig4742:113..132	1691481278.7706366-UTR-H-paniculata_contig4742:113..132	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig4742 114..132 +

The following CDS feature(s) are a part of this mRNA:

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig4742.11782.1	prot_H-paniculata_contig4742.11782.1	Halopteris paniculata Hal_grac_a_UBK monoicous	polypeptide	H-paniculata_contig4742 133..8515 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-paniculata_contig4742:114..8515+
coding sequence from alignment at H-paniculata_contig4742:114..8515+

protein sequence of mRNA_H-paniculata_contig4742.11782.1

>prot_H-paniculata_contig4742.11782.1 ID=prot_H-paniculata_contig4742.11782.1|Name=mRNA_H-paniculata_contig4742.11782.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=397bp
MQEEDDRLRQAVEKLGERNWRHVAQIVATRTHVQCQQRWKKALRPGLVKG
AWSMEEDENLVKLIGEGFSNWSELASHTPGRTAKQCRERWCHHLDPSVNH
GNWTMEEDQQLKALQARLGTKWAAIAREMPGRTEHAVKGRVKTLARCERQ
TSVGGVGDIGRAGGKAGSKTQHSIQVDIELKGNSRGVVDRLSGSAVPPSA
LSSPPLSPTGESPSVSPASVASDWSGLPVTSADVKDNDNLEATVGHGVGE
PGLVQLLPQVPQQLPAEHLVWSPDVSARMPRDLKANRQHQQQQHQQCWHE
EQLQHQHRQHMLMQDQQAKANMQQDHGNNLQLCLDDGFVPQQDVQRQQQQ
QQQQQQQQQVSMQSSPMQQQQQPQMPYTLACPATTAALQSSRGAGGE

mRNA from alignment at H-paniculata_contig4742:114..8515+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-paniculata_contig4742.11782.1 ID=mRNA_H-paniculata_contig4742.11782.1|Name=mRNA_H-paniculata_contig4742.11782.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8402bp|location=Sequence derived from alignment at H-paniculata_contig4742:114..8515+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTGCGGGCGAAGAGGATGGATGCAGGAGGAGGATGACCGCCTTCGACAGG
TGTGGTGTTCGTGTAGAGTTACTTCTTCTGTTCCATGTGCCATAAGTAAG
GTTTGTTGTATTTGACAGGTCCAAGGCTGATCAAAAGCTGCGGTTGGATT
CGTGGGAAGTCGAAGATCTGATGTGCATTCGAATTTGTGTGTGAGGTTTA
ATGGTGGCATAAGGTTGAGCTGATGTTGAATTTTGACTCTTTTTTTTTTT
TTGCGTTTTTTTTCTTTTTTGGAAGAATACGAAAATGGTGCAAAAATATT
GTCCTTGTATCGGTCAAGTGCATATTTTTTTGCATCGTGCGCGCACCGGG
TGGGCTTTGCCATTCTCCGCAAAATTTCGGGTTCAACCCACAAAACACGA
AGGATTCGCATTAAAAAAAAAAAAAAATGATGGATAGAATCGGAGTGTTC
AATTCTATATAGTCATCACTACCTTTGCTTTATATCAGAGGAAGTATGCT
ACTGCTACTGTTGCCATTACGTACGTCTAGAGAGAAGCTTTGGCGTCATC
ATCTGAGACCGCCGGCGTTGAGTGGGAGGTATTGATCGTGTTGGTCGTCG
CTATAATGATATTGTGGCGCGCTACCAATGTCTTGTTTGTGTTTGTGCCG
CTTCCGTAACAGGAATACTTATTTTTAATTTGCTAGTTGCTCTCTGTTGT
TGTGAAGTGAATTCTTCCGCGGTAAGGGTTAGAGTGTTTTTGCGGGGGAG
GACATTGTGATGGGGCCATAAAGTGGGACCTTGTTACTCTTGTCGTTGTA
TGTTTGGGTCCTGCTGCAGTGTTTGCAGCTGCAGTTTATGAGAGACGATG
AAATCAAGGACTGTTTGGGATTTAGTTGGTACAGTTGCTGCCCCTCCCAC
CTGGCTCCATGTTCAGAGATGACATGTGGATAAAAAAGACGATTCACTGG
TATGATCGCAGAATAGTTGACGGCTGCTCTGTCCGTTCCCGTAACTCACT
CGTCACGTTATGGCCATGCCATACTTGACATAGTATTACTTTTTGTACGC
GACTGGTGTTGTGGTGTTTGTTGCCTTGCAGGCAGTGGAGAAGCTGGGGG
AGCGAAATTGGCGGCACGTTGCCCAGATCGTGGCAACCCGAACGCACGTT
CAGTGTCAGCAGAGGTGGAAAAAAGCGCTAAGGTAGGTATTATTTATATG
AATGGACTCCGGAGTATATGTATATGTATATGTATACTTCCTCTGTGCCA
TGAGTTAAGTCACTCGTGTTTGGCCGATAGTATTTCCAGATGTAAGACTG
TTGAGAGGCTGCGGTTGGAATCATTGAAAGCTCAGATCTGATGGTTTCAT
CTTCGTTATTCCGAAGTGCACTCTGATTGATTCATCGTGATTAATGGTCG
TTGAAGGTTGTGCTAGTTTCGACCATTTTCACGTTTTTTTTTTCTTTTTT
CTTTTTTTCGATGTTCACGTTTTTAAAACCAAAAGGGGGAACTATATTAC
CTTTTTTTAGTCCAGTGTTTCTTTTTGTACCGTGCGCACGCACACCCGGT
GGACTCCGCCAATTTCAGCAAAGTTTTGAAGAATAATTAATCCCAAAAAC
ATGCAGGGTCATGAACTAAAACAATAAAAATTGGAGACGGTTACGTGCCT
CTGTAAACGTAACCGGCTTTACTTCATGGCACAGAGGAAGTATATATTTA
TAAAAGTTTTCCCTTCGGGACATGGAGAACGAAGGGATTGCCAAGTGGGC
GAGGAGGATCTGTGCCGAAGCATCTCACGGAAGCAAGCCGTAGTTTATGC
GACAGCTCCCACCGATGTTCCTAGGTCATGTGTGGATAACTATTTGTCCA
AGTTGACTCTTCACAATTTTTTTAAGGGTCCGGAAACTGCAACGTGTGAA
TCACACTCTTTACAGGGCGGTGCGCATGCGCATGTAGAAGAAGTGTGCCG
TTCATTCATTCATACAGTACAGTGCATGCCACAGATAATCATGCCATCTT
TGGCTATTGAAAAATAAAATTTTAACCGTTTCTGTAGATGTGTTTCATGT
ACTATTATCTATTATTCGTACCTGTGTATGTGTAACCCGAGACACTATGC
CCCATCGACGATTCCAGGGGTGTGTGCATGTGCGTGTGTGTGTGTGTGTG
TGTTCCGGCTGACCTGGGTGATCAGTCGGTAGGAACCCTTTCGGTAGCCC
TGCTTGCTGTACAGGGCTTTTTGAAGTATGGTCCCATCAATATGAACAGC
ATTAACAGAAGTGAATGAAGCGGACATCGAATCGTTCGAGGTAGTGTACC
ATACGTGCGGTATACCTGTACATGTACAGTGGTTGGTAGCTATTACGGTT
TCGAGTTTCTGCCGTTATAAGTTGGTCGTCAGCTGTGCCGTAGAGCAACT
GATGCTGTTTCATAGTGAAGACAATGAAAGGAGAAGGAAGTCATACGCAA
AACAATCGCTCGTAGAGCCCAAGAAGGATAATAGTTTCATCTCCTCGACG
ATTACCTGTCGTTCGAATGGTTTAGATGACAGTTGAATAAATTATTCGTT
TGAATTCCAGGTTATGCATGCGTCCGTAGAGTCAAGTTTGGACCCCGTGT
TTGTTCGTCGTGTTATTTGTTATAAGGAGCAGTCGTGGGTAGATGGTCAG
GAGCTCATACTGATGGACCTTGAAGCAAATAGTTTTGATTTGTTTTGTAT
AAACCTATCTATCCAAGTTTTCTTGTTTATGCGAGAGGTGAAATCGTTTC
GTAGTCCATGAGAAATTATGTCTTCACCCCCCCCCCTCCCCCTCCACCGT
CTTCTATCGCGCCATGGGCCGCTGCCATGCAGACCCGGTCTGGTGAAAGG
GGCATGGAGCATGGAAGAGGACGAGAATCTTGTGAAGCTCATTGGAGAAG
GTTTTTCGAACTGGAGCGAGCTGGCGTCGCACACGCCGGGGCGGACAGCG
AAGCAATGTCGCGAGCGTTGGTGCCATCATCTAGACCCTAGCGTGAATCA
TGGCAACTGGACCATGGAGGAAGACCAGCAACTCAAAGCACTACAGGTGC
CGTCTTGAAAGTCAATTCGTGTTAGGCACGTGCCCACCCGCGCGAGGCTC
TCCTCACTTGTTGATCTGACTGAAGTTTGGATAATGACTTAACATTGGAG
TTTCCATGCCGCCTGCGACATTTGATGTCTCCAAAAGGCAATGGATGCTG
TAGAAGTGTTGTCTTTTGGTCTCCAGTCTTTGGGCAGGAGACATTATCGT
CGTTTATTAGGTAAAGTCGGCACGAAAGCTAATAACAATCGAAAACGTTT
CTGAACATAATTTGCTTTAATTCGGAGCTGCGGGTGAGGCAAATAGTTTT
TCTTATTATATCCAGGTACAACATTCAACTTCTGAAAGATACGTATGATA
TCAGTGACTCCCACTTATTTCTCCTTCGCTTTCTGATTTTTTTTGTGTGC
GTTTTTTTTTCACATCAGGCTCGGTTAGGAACAAAGTGGGCCGCGATCGC
GCGGGAGATGCCCGGCCGCACAGAGCATGCCGTTAAGGGCAGAGTTAAGG
TGAGGTGTGAGAGAGGTGGGGGGGGGGGCGGGGCACTCTTGAAGCGGGGC
GGTTGTATGTTTTGAGATACGAGTACGTTCGTAGTTGGATCTCTCTTGAA
GACAAAAGTAAGTACCTACCGCGCGGCAATATTCAGGATTTCACCCGCCT
CCCCCGAATGAAAAGTCATGTTTTGTTTGGTTTTAGAAAACAGGAGAAAA
AAACATAAAACGTACTGCAGATGTCCGAGTTCTGCATGTTCGGGCACACA
AATAAAGTGTTAGACGACCTCCTGTTTTTCTCACTCGTTTTGATGTATTT
TCGGAGTAGTCTGGAGCAGATGGTCCTAGGGGCACATGGAGTAAACGTGC
TCATTCATGCCGATTCTTTGGGTGACTGCTGTTAAAATTTTCGTATAAAT
CAAGCATTTGAAGTATTTGTGTTCGTCACGGGGGTGTTAAGATTTGAAGA
GTTGGTGGTAGTGGTGTGAGGCTCACTTTTCGGAGGGTAGTCGTCTGCCG
TCACCACGAGCCGATAAGCCCCTTCTTTTTGTTTTCGTAATGAAGACGGA
CGTACGTGAATGCTCCTCACCATGTCACCTTGTACTCGCCTACGTTCAAG
TGGAACGAACTTGTGAGAACCTTTGTTTTGTTCATTCCATTTGAGTATTT
TCAAATGTAACTGTTCAAAATTGTTTTTATGGGTAATTTTTGTTGCTAAA
CGAGGGAGACCCGTTGGTCGAAAGTCTGGATGTGTAATAATGCCCTGGGG
TTCTTGTGTTGTACTATCGCCCGGTGGGAGCAGCACTCCACCTCATTCAC
TAGCCACCGCTGGAATTGACGGTGGTGTACTATGAAAAATATTCCAACCA
CCGGACAAATACGAAAATTTGCAATTTTTTCCGCAAAAAACTGAAAGTAT
TCGCCTGAATTTCAGAATGAGCTCATGTATTCTATGTGCACCGGACCATT
CACGACTGCTATTAATACTCGTAAATCGAATGGACAGGGGTGAGTATTTC
ATTCTGTGTGTCCGCTCGTTCTGAAAACTCCGGCGAATTCTTTTTCGTTT
TTTTGTGAAAACCTTTTGCAAGTATTCGTATTTGTCCGGGGGAGTAAAAA
CAATTCTTATCGCTTACGTGCAATTTGTCCTTCCTTTTGTTTTTTCCGAA
GTTTGAGAAGAACTGTCATAGGTTCCGAGAATTGAACCCATGACCTACCG
ACGTGATAATGTTTTAAATGTTACGGTACAATTTGACCATATGGCGCATG
GTCTGCGAACCGTGGGATTTGTTGATTGTTTGCTTTGGAGTCCACGAAAC
GGCTCTACCTCTTGTCATTGGCCATAACCCTCCCAGGCGTGCATGTGACA
GCTTGAACCAACGAACCAACAAACGCGTTGTCTTGTCCTGTTTCAGACGT
TGGCTCGGTGTGAGCGACAAACGTCAGTAGGTGGCGTCGGCGATATTGGG
AGGGCTGGTGGCAAAGCGGGATCGAAGACGCAGCACTCGATTCAGGTGAT
CCGTGCATAATTCGTGGCGTGATCTGTGCAGTCCTTTTGTTTGCCCAAGC
ACACGGTATGGCAAAGTTATGCGGAAGCTTGTCGACTGTATTATGTGCAA
CCTCCTCCCCCTCCTCCTCGTCTGCCGTTACGTACCGAAACGAGCCGTGT
ACATGGTACAGTATACAGTGTATAATACAGTTGGAGGCTTTAGTTGTGTT
CAGTTCGAAGCCCGAGGTTGGTACAACAATAGTACAAGCTGGGCCGACCA
AGAAGCTGACATTCTTTCTGACAACCATAACTCAAGAAGGAAGAGGAACT
ATACCGAACAGAAAGTACCGCTGAAATCGGCCAATCAGCGCGCGTATGCA
CATCCACGTCTTTTTGCAATTACACCACTTCCAACGGAAATAAACAGCAG
ACGCGATATTGTACTGGGTATAGAATGGGTGAAACCGCAGTTTTTTAATT
TTTTTCGCGGCGGAATTTCAAGTTTTTTTAATCTTCTAAAACGAACCTTT
CCAACACACAATTTTTTTCGTGTTTGTGTGACAAATGTCCACAATACACA
ACAATAGTTTGTTGCTGAAATACATGTGGTGAAATTTCGACCGAAAAAGT
GGCTGCCAGCGAAAAAACTCGATTGCAGGTATGCAGCTCATTTCTACTTT
GTTTTTTTTGTAATTTTGACACGTGACCCAGAAGGTATAACTGCATAAGC
TTTTTGGCGGACACTTTTGATTTATTTATTTTTGTGTCATTTCGGGCGAT
TCCCTACATACGCCAACCCTTGAATCAGTCATAACTCGGCAAAAAAAAAC
AAAAAAAACTTTTGAGTCCGCCATCCTTCGTATGCGCAGATACCTTTCGG
ACCAACTGTCAAAATTTTATCAAAAACGGATCAATATTGAGCTGCGTAAT
CCCGATATACTGTGTGTGTAGCCCCTTGGTCGGCCCAGCTTGTACTATGA
TTGTCTCCCTGAACACCTCCCCATATAGATTACAGTTCCCTGCTGGCATT
GCTAGTGGATGCGCACACACCTGCATGACCTAAGTCGGGCTACGGTAGTG
TGGGGGGGTGTTGTTAACCTCTTTGTCTTGATTCTTGAGCCGATTTTGCA
AAGTGGCTAGGCAAAAGATATCCCCAGCATGGCCACTTATTCTGGATCGT
GCATTGTGCACGCTTGGTGATGCGTGAACGCATGCCGTTGAATAGGTTTT
GGTTTTTAGTTTATTTTCCGCCTATTTGTGGATCGACGGTCGTTCAACAT
TTTACCCTCCCCGACCGTAGCCCTACACACGTCCTGATACATTGTCCAGC
CCCTGTGACATGAAAGGACTGTCCTGTAGCACAACCGACCTTGCAGTCGA
AGACACAGGTACTTGTGGGATTTTTTGCTGACACCAAAGCACACTACACA
ACCCCACATCACCCCCGACCTGCTGGTTTCTTTTGTTGGCCAAGGTGGAT
ATTGAGCTGAAAGGTAACTCCCGAGGTGTAGTCGACCGCCTGTCAGGCTC
TGCAGTCCCCCCATCGGCTCTCTCGTCACCGCCCCTGTCGCCGACCGGAG
AATCACCTTCTGTGTCGCCAGCGTCAGTGGCATCGGATTGGTCCGGCCTA
CCGGTAACTTCAGCTGACGTGAAGGACAACGATAATCTTGAGGTGGGCTT
TGTGTGTGACGAACGCTTGACGCAAATATTATCCTAAAGAGCTAACTTGT
ACTTTTTTTAGTAACATGTGTAGTCAAGCAAGTCACACCAGTTGAAGCGG
GGTCGCCGGCCGGAGTCGAAGATGGATTGGCTTCGTACCATGCCATTGCA
ACGAGGTGCCGTACATCTATGTTTAGTGACGTCCTGACGTGGGTCTGGGA
TGCGTGAAGGCATGGTTTGTTGCTTGGTAGCTTGGTGGTATGATGTTGCT
GCTTGAGAGCACTGGGCCTGTGCTTTTGAGGTTGTTTGCGAAGCATGGGG
GAGTCGATAATATGCAGTATTTTTCGGATTCTAGCAGTGTGTGGACATGC
CGCGTTTTTAGTTTGGCCCCGAACGACTTTGTTGGAAGCTTCTGCCTTGC
TTGCTTCTTTTGATTCTGCGGTAAACGCTCTGTGTCCGTTCCCCATGAGT
GGGTTCGATTCCCTGTACAGCACTCACATTTTTTCTTGTTAAATTTTTCA
GGGAAAAATGTGTTATTATTACGCATAACACAAAAAGAAAAAGCCTGAGA
AAGGGAGAATAATACTCGTTTTAATAAAAAAATACCGCCGTTAACTCCAA
CGTTGGCGAGCGAGTAGGACTGCTGTCCCTACTGCGCGATACTAAGATAC
AGAAAAAACGAAGTATTATATATTCCCCGCTTCGAACCGGAGGTTCCGAG
AGTAGGCGAAATGATTCACGACGTGAAAAATGGAAGAAAACATCGTGCTA
GTTTTTTGGTTGTTTGCCAGCCGTTGTTCCACGTTACGTTGAAATTGTTT
TTTTTGTTTCTTTGTTCTTGGTGTTGCGCTATGTTGTTGGGTGTGTAATC
AGGCAACAGTGGGGCATGGAGTTGGGGAACCAGGCCTGGTCCAACTTTTG
CCTCAAGTTCCGCAGCAGCTTCCGGCGGAGCATCTCGTGTGGAGTCCCGA
TGTTTCTGCTCGCATGCCCAGAGATTTAAAAGCGAACCGGCAACACCAGC
AGCAGCAACACCAGCAGTGTTGGCATGAAGAGCAGCTACAACATCAACAT
CGACAGCACATGTTGATGCAAGATCAGCAAGTACGTGTGGCTCTGTGCCT
GCCCCTCCGTTTATTAATGCTGGAATTTTTGGAATTTTTGGAATTTTTGG
AATTTTTGGAAAGAACAGTGGTGTTGGTTTTTCTGCTTGTTGATAATGTA
AACAGCCGTATCCCTTTCAGGCACACCGAAGTGGTATACTAAGTTTACTA
CCTACTGCCTTTTCGCTTTTCGCTTTTCGTGTCTGCAGGGCACGTTTTTC
TTAATTATTTCTTGCGCCGTGAGTACTAACTGACTACAGTGTGTGTATTA
GTTGAAAATCCGATGGATAGATCTGACGAACGGTAATTAACCCACCTGTT
TTGCTCTCATGCGCGTGCTCTCGTGTCTTCCGCTCAATCGCTCACTTCAC
GTTGTGCAGCAGGCTAAGGCTAACATGCAACAAGACCACGGTAATAATTT
GCAACTCTGCTTGGACGACGGCTTTGTGCCCCAACAGGACGTGCAACGGC
AGCAGCAGCAGCAACAACAACAACAACAACAACAACAAGTGTCCATGCAG
TCATCGCCAATGCAACAACAACAGCAACCGCAAATGCCGTACACCCTAGC
ATGCCCCGCCACCACTGCAGCGCTCCAAAGCAGCAGGGGTGCCGGAGGAG
AG

Coding sequence (CDS) from alignment at H-paniculata_contig4742:114..8515+

>mRNA_H-paniculata_contig4742.11782.1 ID=mRNA_H-paniculata_contig4742.11782.1|Name=mRNA_H-paniculata_contig4742.11782.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2382bp|location=Sequence derived from alignment at H-paniculata_contig4742:114..8515+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCAGGAGGAGGATGACCGCCTTCGACAGATGCAGGAGGAGGATGACCG
CCTTCGACAGGCAGTGGAGAAGCTGGGGGAGCGAAATTGGCGGCACGTTG
CCCAGATCGTGGCAACCCGAACGCACGTTCAGTGTCAGCAGAGGTGGAAA
AAAGCGCTAAGGCAGTGGAGAAGCTGGGGGAGCGAAATTGGCGGCACGTT
GCCCAGATCGTGGCAACCCGAACGCACGTTCAGTGTCAGCAGAGGTGGAA
AAAAGCGCTAAGACCCGGTCTGGTGAAAGGGGCATGGAGCATGGAAGAGG
ACGAGAATCTTGTGAAGCTCATTGGAGAAGGTTTTTCGAACTGGAGCGAG
CTGGCGTCGCACACGCCGGGGCGGACAGCGAAGCAATGTCGCGAGCGTTG
GTGCCATCATCTAGACCCTAGCGTGAATCATGGCAACTGGACCATGGAGG
AAGACCAGCAACTCAAAGCACTACAGACCCGGTCTGGTGAAAGGGGCATG
GAGCATGGAAGAGGACGAGAATCTTGTGAAGCTCATTGGAGAAGGTTTTT
CGAACTGGAGCGAGCTGGCGTCGCACACGCCGGGGCGGACAGCGAAGCAA
TGTCGCGAGCGTTGGTGCCATCATCTAGACCCTAGCGTGAATCATGGCAA
CTGGACCATGGAGGAAGACCAGCAACTCAAAGCACTACAGGCTCGGTTAG
GAACAAAGTGGGCCGCGATCGCGCGGGAGATGCCCGGCCGCACAGAGCAT
GCCGTTAAGGGCAGAGTTAAGGCTCGGTTAGGAACAAAGTGGGCCGCGAT
CGCGCGGGAGATGCCCGGCCGCACAGAGCATGCCGTTAAGGGCAGAGTTA
AGACGTTGGCTCGGTGTGAGCGACAAACGTCAGTAGGTGGCGTCGGCGAT
ATTGGGAGGGCTGGTGGCAAAGCGGGATCGAAGACGCAGCACTCGATTCA
GACGTTGGCTCGGTGTGAGCGACAAACGTCAGTAGGTGGCGTCGGCGATA
TTGGGAGGGCTGGTGGCAAAGCGGGATCGAAGACGCAGCACTCGATTCAG
GTGGATATTGAGCTGAAAGGTAACTCCCGAGGTGTAGTCGACCGCCTGTC
AGGCTCTGCAGTCCCCCCATCGGCTCTCTCGTCACCGCCCCTGTCGCCGA
CCGGAGAATCACCTTCTGTGTCGCCAGCGTCAGTGGCATCGGATTGGTCC
GGCCTACCGGTAACTTCAGCTGACGTGAAGGACAACGATAATCTTGAGGT
GGATATTGAGCTGAAAGGTAACTCCCGAGGTGTAGTCGACCGCCTGTCAG
GCTCTGCAGTCCCCCCATCGGCTCTCTCGTCACCGCCCCTGTCGCCGACC
GGAGAATCACCTTCTGTGTCGCCAGCGTCAGTGGCATCGGATTGGTCCGG
CCTACCGGTAACTTCAGCTGACGTGAAGGACAACGATAATCTTGAGGCAA
CAGTGGGGCATGGAGTTGGGGAACCAGGCCTGGTCCAACTTTTGCCTCAA
GTTCCGCAGCAGCTTCCGGCGGAGCATCTCGTGTGGAGTCCCGATGTTTC
TGCTCGCATGCCCAGAGATTTAAAAGCGAACCGGCAACACCAGCAGCAGC
AACACCAGCAGTGTTGGCATGAAGAGCAGCTACAACATCAACATCGACAG
CACATGTTGATGCAAGATCAGCAAGCAACAGTGGGGCATGGAGTTGGGGA
ACCAGGCCTGGTCCAACTTTTGCCTCAAGTTCCGCAGCAGCTTCCGGCGG
AGCATCTCGTGTGGAGTCCCGATGTTTCTGCTCGCATGCCCAGAGATTTA
AAAGCGAACCGGCAACACCAGCAGCAGCAACACCAGCAGTGTTGGCATGA
AGAGCAGCTACAACATCAACATCGACAGCACATGTTGATGCAAGATCAGC
AAGCTAAGGCTAACATGCAACAAGACCACGGTAATAATTTGCAACTCTGC
TTGGACGACGGCTTTGTGCCCCAACAGGACGTGCAACGGCAGCAGCAGCA
GCAACAACAACAACAACAACAACAACAAGTGTCCATGCAGTCATCGCCAA
TGCAACAACAACAGCAACCGCAAATGCCGTACACCCTAGCATGCCCCGCC
ACCACTGCAGCGCTCCAAAGCAGCAGGGGTGCCGGAGGAGAGGCTAAGGC
TAACATGCAACAAGACCACGGTAATAATTTGCAACTCTGCTTGGACGACG
GCTTTGTGCCCCAACAGGACGTGCAACGGCAGCAGCAGCAGCAACAACAA
CAACAACAACAACAACAAGTGTCCATGCAGTCATCGCCAATGCAACAACA
ACAGCAACCGCAAATGCCGTACACCCTAGCATGCCCCGCCACCACTGCAG
CGCTCCAAAGCAGCAGGGGTGCCGGAGGAGAG