prot_H-paniculata_contig474.11776.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig474.11776.1
Unique Nameprot_H-paniculata_contig474.11776.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length867
Homology
BLAST of mRNA_H-paniculata_contig474.11776.1 vs. uniprot
Match: A0A6H5L887_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L887_9PHAE)

HSP 1 Score: 283 bits (725), Expect = 1.660e-77
Identity = 350/1059 (33.05%), Postives = 455/1059 (42.97%), Query Frame = 0
Query:    1 MTTLAS-IEAVRLSCP------RRPRGAFSPVVLIGGDHPMTEHGPTAGGGGI---------------------DGGVSGRFKRDLELGG--EVQPPPPKRMSPIPPRGQDSTIRDHHPHMDASRL------GDGPSGLSLGNIVAATVPVDSMVRANRGVPPRGRSRQSSPFRS-----DGLHPQYTRESAQSIIRAHTTSPPKADPVVSTV------------------VNGNRPVRSLSVMNC-------AISAELWKTATSTSGACDSVVKPCSTARAGXXXXXXXXXXXXSAGTSAMSLAPSMLMNYRRDVLKPSPQQNIGSVGSVGASGERDNGGDCGGWGFGGRGDQRGADSSRVSTSDESPGGSRRSMKRPLGGGLRASSSWDGGSASNAPPGSGGGFSAAPAC-RSCGGXXRXXXXXXXXXXXXXXGETCSCKGLRASLCLSPLPFSRTNSLDVGGHDSRRHGVGEEDFFMLSHLSYTFSPLSSPAVG--------------------------------------------------------SQAGVSSGGXXXXXXX----------------GAEGLEMLDGGGDMPAIADCMQTLLGNPSHDSA------------------GFGMSPFDRGMSPGDGLEATGGDGKDESNHSNGEMDVESPQGSRLDGNHLLHG-------------GMGVPGSGMGSVVGNGD--VGPKVGDNYQAVIPTLSTLSANGDYRLSPQRSPPLQLWKPGTVSDTAAEFAFPKPRPNGPGSAELEQKLLAAYLIHRAEEET------GWRRDPDASASVATGG----------------------------CGGAGLGV--ASARVSGVAVTGGSIGGSGGNSIEQDTSSLESLSELVAQGEGARWRTDWTPADQDSFRRGVYAFRRNFQRIRAKFLPTKTHGDVVEYFYRRWKRNPDYTDWKGTDQLVGRRVAKVSE-----------ERFAA--MRYGYVAGKDVSLCSGV-ELLFRVVFPRSAPLEAESELVDLGTLETMLVEGFVAEEQKRSE 837
            MTTLAS ++A + + P      RR  GAFSP +   GD PM++ G                             +G V+GR+KRDLE GG  E QPPP KR SP+P        + H+P   A+        GDG          AA VP+              R+ Q SP  S      G H +  RE+A  + RAHTTSP KA  V +                    + G RP R+ +++         A+S +L    ++ +G   S  +P       XXXXXXXXXX    G            ++RRD+L PSP ++    GS G  G     G                      +  +SPG S +  KRPLGGGLRAS+S DGGSAS+APPGSGGGFSA PA   SC G             XXXX          +++CLSPLPF+R+ S +                                                                                           +  G S+ GXXXXXXX                G + LEML G  +M  I DCM+TL  +P+H S+                  GF +S  D                       +G+MDVE   GSR +G   L G             G      G  + + + D  VGPK+GD++QAVIP LS+++ +G    S  R PPLQLW+PG +S  A + A PKP P G GSAELEQK+LAA+LI +  E           RD  ++   + GG                              GAG G+  A+A  +   VTG S         E+DT  L  L+ +V  GEGARWR+DW+  D+ +FRRG++AFRR+F R+RA FLP K +GDVVEYFYRRWKRNP+Y  WK TDQLVGRRVAK  E           +RF    MR G+V  K+  L  G  E +F + +PR    + + E VDLGTLETMLVEG  ++E +  E
Sbjct:    1 MTTLASTLDAKKAASPLVSPCIRRLGGAFSPAL---GD-PMSDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXLNNGNVNGRWKRDLEPGGCEEQQPPPAKRASPVP-------RKPHNPETRAAETAVARPPGDG----------AAAVPMAPXXXXXXXX----RAWQLSPTYSLNGGAGGSHAR-ARENAFVMSRAHTTSPSKATAVKAGAAXXXXXXXXXXXGSEVLSLGGTRPSRA-NMLGADRPRSPPALSEKLAFLPSTPNGQHSSHHQPPRXXXXXXXXXXXXXXXRTMVGHR----------HHRRDILHPSPAKHNVVAGSCGLEGGA---GSAXXXXXXXXXXXXXXXXXXSESEGDSPGNSCKGTKRPLGGGLRASASCDGGSASDAPPGSGGGFSAPPALFESCEGKEAGSCSDAGGKGXXXXXXXXXALRPPSTICLSPLPFARSMSTESSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAGIGRSASGXXXXXXXXXXXXXXXXXXXXXSRGVDELEMLIGNDNMHDIQDCMRTLQASPTHGSSXXXXXXXXXXXXXXXXXIGFYISSLDEAXXXXXXXXXXX--------XXSGDMDVEGA-GSRSNG--ALGGXXXXXXXXXADPFGRQEDSYGAAATLTSYDDEVGPKIGDSHQAVIPKLSSMTEDGTPLRSSPRPPPLQLWRPGVLSHAALDLALPKPCPGGAGSAELEQKMLAAFLIAKTNESERRSDGXXXXRDSLSACGSSDGGDAAXXXXXXXXXXXXXXXXXXXXXXXSRAEGAGKGLFRAAATATAADVTGAS---------ERDTDGLHGLAAVVMAGEGARWRSDWSEEDRAAFRRGIFAFRRDFHRVRAAFLPHKVYGDVVEYFYRRWKRNPEYAAWKCTDQLVGRRVAKRVETTHVREGAGQAKRFETLGMRRGWVVEKEDMLLHGRDEDMFVIRYPRMGVFQVKFERVDLGTLETMLVEGSASDEDRAEE 999          
BLAST of mRNA_H-paniculata_contig474.11776.1 vs. uniprot
Match: D8LF90_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF90_ECTSI)

HSP 1 Score: 91.3 bits (225), Expect = 9.950e-16
Identity = 45/93 (48.39%), Postives = 61/93 (65.59%), Query Frame = 0
Query:  549 DVGPKVGDNYQAVIPTLSTLSANGDYRLSPQRSPPLQLWKPGTVSDTAAEFAFPKPRPNGPGSAELEQKLLAAYLIHRAEEETGWRRDPDASA 641
            +VGPK+GD++QAVIP LS+++ +G    S  R PPLQLW+PG +S  A + A PKPRP G GSAELEQK+              W+R+P+ +A
Sbjct:  203 EVGPKIGDSHQAVIPKLSSVTEDGTTLRSSPRPPPLQLWRPGALSPAALDLALPKPRPGGAGSAELEQKMR-------------WKRNPEYAA 282          
BLAST of mRNA_H-paniculata_contig474.11776.1 vs. uniprot
Match: A0A7S3UTJ5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UTJ5_HETAK)

HSP 1 Score: 55.8 bits (133), Expect = 1.120e-5
Identity = 21/55 (38.18%), Postives = 35/55 (63.64%), Query Frame = 0
Query:  703 DWTPADQDSFRRGVYAFRRNFQRIRAKFLPTKTHGDVVEYFYRRWKRNPDYTDWK 757
            +WT  ++  F   +Y F + F +IR K+LP K+   +VEY+Y+ +K++ DY  WK
Sbjct:    7 EWTEVEKRKFDDAMYEFGKEFSQIRKKYLPKKSVKQLVEYYYKHYKKSEDYKTWK 61          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig474.11776.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L887_9PHAE1.660e-7733.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LF90_ECTSI9.950e-1648.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3UTJ5_HETAK1.120e-538.18Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.10.60coord: 697..762
e-value: 4.2E-12
score: 47.7
NoneNo IPR availablePANTHERPTHR16089:SF28GEO13032P1-RELATEDcoord: 683..754
NoneNo IPR availablePANTHERPTHR16089REST COREPRESSOR COREST PROTEIN-RELATEDcoord: 683..754
IPR017884SANT domainPROSITEPS51293SANTcoord: 699..751
score: 10.77
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 703..751

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig474contigH-paniculata_contig474:20264..24540 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig474.11776.1mRNA_H-paniculata_contig474.11776.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig474 20264..25663 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig474.11776.1 ID=prot_H-paniculata_contig474.11776.1|Name=mRNA_H-paniculata_contig474.11776.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=867bp
MTTLASIEAVRLSCPRRPRGAFSPVVLIGGDHPMTEHGPTAGGGGIDGGV
SGRFKRDLELGGEVQPPPPKRMSPIPPRGQDSTIRDHHPHMDASRLGDGP
SGLSLGNIVAATVPVDSMVRANRGVPPRGRSRQSSPFRSDGLHPQYTRES
AQSIIRAHTTSPPKADPVVSTVVNGNRPVRSLSVMNCAISAELWKTATST
SGACDSVVKPCSTARAGAGAVAGGGGGEGSAGTSAMSLAPSMLMNYRRDV
LKPSPQQNIGSVGSVGASGERDNGGDCGGWGFGGRGDQRGADSSRVSTSD
ESPGGSRRSMKRPLGGGLRASSSWDGGSASNAPPGSGGGFSAAPACRSCG
GGGRGSVGDAGQGEDGQEGETCSCKGLRASLCLSPLPFSRTNSLDVGGHD
SRRHGVGEEDFFMLSHLSYTFSPLSSPAVGSQAGVSSGGGDGDGGGGAEG
LEMLDGGGDMPAIADCMQTLLGNPSHDSAGFGMSPFDRGMSPGDGLEATG
GDGKDESNHSNGEMDVESPQGSRLDGNHLLHGGMGVPGSGMGSVVGNGDV
GPKVGDNYQAVIPTLSTLSANGDYRLSPQRSPPLQLWKPGTVSDTAAEFA
FPKPRPNGPGSAELEQKLLAAYLIHRAEEETGWRRDPDASASVATGGCGG
AGLGVASARVSGVAVTGGSIGGSGGNSIEQDTSSLESLSELVAQGEGARW
RTDWTPADQDSFRRGVYAFRRNFQRIRAKFLPTKTHGDVVEYFYRRWKRN
PDYTDWKGTDQLVGRRVAKVSEERFAAMRYGYVAGKDVSLCSGVELLFRV
VFPRSAPLEAESELVDLGTLETMLVEGFVAEEQKRSESKYRPRVAATIRG
ALASSGLHHSFEGARDG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017884SANT_dom
IPR009057Homeobox-like_sf