prot_H-paniculata_contig4736.11766.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4736.11766.1
Unique Nameprot_H-paniculata_contig4736.11766.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length700
Homology
BLAST of mRNA_H-paniculata_contig4736.11766.1 vs. uniprot
Match: D8LRF8_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRF8_ECTSI)

HSP 1 Score: 259 bits (661), Expect = 4.230e-73
Identity = 181/489 (37.01%), Postives = 248/489 (50.72%), Query Frame = 0
Query:  219 VSDLVTLADLVERTTCSGGVFRVSWRGALTLTEPLVVGNSTSLTVKGMGSEAAMDGGGSSRIIQAAGGSQVILENIELRNGSAPFASGGGGAINVDGENFELQATSCNFTKNYSPLDGGAIIITGAGAIVRFDRSRFEENTAGQSGGFMRADSAFALEARDCVFSGNVALAQNGFG-----GSGGAIYVSGGTPQMEIQGCEFSANNASDVGGALCYEAAAELTVSSSLISGNWAAYGGGALSVYG-TNRVYVEDTLFEDNYSSSKAQWVSSNFFPGGAVAIVGETELTLKTSVFARNGADRGGAMAVRGNNTVVVEDCRFEDNLSGVGGGGVFFVSYPSSGPYSGSFTXXXXXXXXXXXXXXAIMA-LDMGNISFNGLLFWNNSVVYRDDISGT-GSHQGGAISVEGGGIVTV-AKECLFRENLAGAAGXXXXXXXXXXXXVGCSFLENAVRFMGEGGAISATRGDAVLAAVVNLVGGDLRRNVAKDG 698
            VS    LA LVE T CS G F VSW+GALTL+EP+VVGNST+L+++G+G  + +DGGG SR+ Q +GG+ + L+N+ELRNGSAP+ +GGG AI  DGE+  L  +SCNFT N +PLD                                      A+ AR  +F  NVA   N        G GGA+ +SGGTPQ+    CE   NNA+  GGA+  +A A +T++S+L+ GNWA   GG + V G   +V V D++F  N++S  A W SS    GGA+ + G+  +++K+S F  NGA+                       L    GGG+  ++    GP+  +FT               + A L  GN++     F NN+V YR+       SH+GG + V G G + V A++C    N AGA G             GC F  N     G GGAI+A   D   AAVV + GG +R N A+ G
Sbjct:    3 VSTAAQLATLVESTNCSDGAFVVSWQGALTLSEPVVVGNSTTLSIEGVGDGSVLDGGGGSRLFQVSGGASLFLQNLELRNGSAPYYNGGG-AIYADGEHVSLLVSSCNFTANRAPLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVTARKTLFLANVAEGPNSAWDNFDVGVGGAVGLSGGTPQLAFHECELRHNNATSYGGAVYSDAGASVTMNSTLLDGNWAGEDGGGVHVKGDVAQVDVLDSVFTGNFASDSASWSSSLSHVGGALYVFGQAAVSIKSSSFTGNGAEGXXXXXXXXXXXXXXXXXXXXXXLGNAQGGGIMIIN---EGPFDVNFTDTAFSDNWSGGNGAGLWAFLTAGNLTLLRTNFSNNAVAYREGFFDVPNSHRGGGVWVSGDGEMAVQAEDCHLEGNEAGAQGGGMAIDGGVLRAAGCGFSGNVA---GRGGAIAAAGEDDDSAAVVFVRGGFMRGNSAELG 484          
BLAST of mRNA_H-paniculata_contig4736.11766.1 vs. uniprot
Match: A0A6H5JWU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWU3_9PHAE)

HSP 1 Score: 135 bits (341), Expect = 1.410e-33
Identity = 70/117 (59.83%), Postives = 88/117 (75.21%), Query Frame = 0
Query:  219 VSDLVTLADLVERTTCSGGVFRVSWRGALTLTEPLVVGNSTSLTVKGMGSEAAMDGGGSSRIIQAAGGSQVILENIELRNGSAPFASGGGGAINVDGENFELQATSCNFTKNYSPLD 335
            VS    LA LVE T CS G F VSW+GALTL+EP++VGNST+L+V+G+G  A +DGGG SR+ Q +GG+ + LEN+ELRN SAP+ SGGG AI  DGE+  L  +SCNFT N +PLD
Sbjct:    3 VSTAAQLATLVENTNCSNGAFVVSWQGALTLSEPVLVGNSTTLSVEGVGDGAVLDGGGGSRLFQVSGGASLFLENLELRNASAPYYSGGG-AIYADGEDVSLLVSSCNFTGNRAPLD 118          
BLAST of mRNA_H-paniculata_contig4736.11766.1 vs. uniprot
Match: A0A6H5JUM3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUM3_9PHAE)

HSP 1 Score: 144 bits (364), Expect = 4.480e-32
Identity = 115/337 (34.12%), Postives = 161/337 (47.77%), Query Frame = 0
Query:  369 ADSAFALEARDCVFSGNVALAQN-GFG----GSGGAIYVSGGTPQMEIQGCEFSANNASDVGGALCYEAAAELTVSSSLISGNWAA-YGGGALSVYGTNRVYVEDTLFEDNYSSSKAQWVSSNFFPGGAVAIVGETELTLKTSVFARNGADRGGAMAVRGNNTVVVEDCRFEDNLSGVGGGGVFFVSYPSSGPYSGSFTXXXXXXXXXXXXXXAIMA-LDMGNISFNGLLFWNNSVVYRDDISGT-GSHQGGAISVEGGGIVTVAKE-CLFRENLAGAAGXXXXXXXXXXXXVGCSFLENAVRFMGEGGAISATRGDAVLAAVVNLVGGDLRRNVAK 696
            A +A A+ A+  +F  NVA   N G+     G GGA+ +SGGTPQ+    CE   NNA+D GGA+  ++ A +TV+S+L+ GNWA  YGGG  +  G  +V V D++F  N++S  A W SS    GGA+ IVG+  +++K+S F  NGA+                       L    GGG+  ++    GP+  +FT               + A L+ GN+      F NN+V YR+      GSH+GG + V G G +TV  E C    N A A G              C F  N     G GGAI+A         VV + GG +R N A+
Sbjct:    2 AITASAVTAQKTLFLSNVAEGPNSGWDDFDVGVGGAVGLSGGTPQVAFHECELRRNNATDNGGAVYSDSGASITVTSTLLDGNWAGGYGGGVYANGGVAQVDVLDSVFTGNFASDMASWSSSVSHAGGALYIVGQAAVSIKSSSFTGNGAEGAXXXXXXXXXXXXXXXXXXXXXLGNAQGGGIMIIN---EGPFDVNFTDTVLSDNWSGGNGGGLWAFLNAGNLILLRTNFSNNAVAYREGFFDVPGSHRGGGVWVSGNGEMTVQAEGCHLEGNEADAQGGGMAVDGGVLRAADCGFSGNVA---GRGGAIAAXXXXXXXXXVVFVSGGYMRGNSAE 332          
BLAST of mRNA_H-paniculata_contig4736.11766.1 vs. uniprot
Match: A0A836CF41_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF41_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 3.130e-11
Identity = 65/174 (37.36%), Postives = 90/174 (51.72%), Query Frame = 0
Query:  199 LLGMTVAEAAVCSPADADVVVSDLVTLADLVERTTCSGGVFRVSWRGALTLTEPLVVGNSTSLTVKGMGSE---AAMDGGGSSRIIQAAGGSQVILENIELRNGSAPF--ASGGGGAINV--DGENFELQATSCNFTKNYSP-LDGGAIIITGAGAIVRFDRSRFEENTAGQSG 364
            ++ +T A  A    A  D++  D  +   L E T C G    V WRG + LTEP++VGN TSL + G+G+E   AA+ G   ++++    G+ V L ++ELR+G A     SG GGA+ V  DG+   L   +C F  N    L GGAI   G    V    S F +NTAG  G
Sbjct:   12 VMKVTAAPVAPVCKAPPDII-DDHASAMRLTEATVCPGQNITVKWRGFVGLTEPIIVGNGTSLVIDGVGTESDPAAISGQNKTQVLHVQKGASVTLRHLELRDGRAMVDGISGEGGAVRVFRDGQ---LLVEACQFRLNRGGGLGGGAIYNEGH---VTCLSSIFAQNTAGFGG 178          
BLAST of mRNA_H-paniculata_contig4736.11766.1 vs. uniprot
Match: A0A835Z719_9STRA (UCH domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z719_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 1.010e-10
Identity = 65/174 (37.36%), Postives = 89/174 (51.15%), Query Frame = 0
Query:  199 LLGMTVAEAAVCSPADADVVVSDLVTLADLVERTTCSGGVFRVSWRGALTLTEPLVVGNSTSLTVKGMGSE---AAMDGGGSSRIIQAAGGSQVILENIELRNGSAPF--ASGGGGAINV--DGENFELQATSCNFTKNYSP-LDGGAIIITGAGAIVRFDRSRFEENTAGQSG 364
            ++ +T A  A    A  D++  D  +   L E T C G    V WRG + LTEP++VGN TSL + G+G+E   AA+ G   ++++    G+ V L ++ELR G A     SG GGA+ V  DG+   L   +C F  N    L GGAI   G    V    S F +NTAG  G
Sbjct:   12 VMKVTAAPVAPVCKAPPDII-DDHASAMRLTEATVCPGQNITVKWRGFVGLTEPIIVGNGTSLVIDGVGTESDPAAISGQNKTQVLHVQKGASVTLRHLELRVGRAMVDGISGEGGAVRVFRDGQ---LLVEACQFRLNRGGGLGGGAIYNEGH---VTCLSSIFAQNTAGFGG 178          
BLAST of mRNA_H-paniculata_contig4736.11766.1 vs. uniprot
Match: A0A836CDQ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDQ4_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 5.320e-7
Identity = 48/137 (35.04%), Postives = 73/137 (53.28%), Query Frame = 0
Query:  207 AAVC-SPADADVVVSDLVTLADLVERTTCSGGVFRVSWRGALTLTEPLVVGNSTSLTVKGMGSE---AAMDGGGSSRIIQAAGGSQVILENIELRNGSAPFASGGGGAINVDGENFELQATSCNFTKNYSPLDGGAI 339
            AAVC +P D   +V D  +   L E   C      V WRG + +TEP++VG+ T+L + G G++   AA+ G  ++++++   G+ V L+ + LR+G    A G GGAI  DG+     +T    T      DGGAI
Sbjct:   26 AAVCKAPPD---IVDDHASAMKLTEAAACRDQNITVQWRGFVNVTEPIIVGDGTTLVINGWGADSEPAAISGQHATQLLRVQNGASVTLQELRLRDGFVE-AGGDGGAIFNDGDFTCSNSTFAINTAAGFSYDGGAI 158          
BLAST of mRNA_H-paniculata_contig4736.11766.1 vs. uniprot
Match: A0A518ENH3_9BACT (Beta_helix domain-containing protein n=1 Tax=Planctomycetes bacterium Poly30 TaxID=2528018 RepID=A0A518ENH3_9BACT)

HSP 1 Score: 59.7 bits (143), Expect = 1.650e-5
Identity = 70/267 (26.22%), Postives = 114/267 (42.70%), Query Frame = 0
Query:  281 IQAAGGSQVILENIELRNGSAPFASGGGGAINVDGENFELQATSCNFTKNYSPLDGGAIIITGAGAIVR---FDRSRFEENTAGQSGGFMRADSAFALEARDCVFSGNVALAQNGFGGSGGAIYVSGGTPQMEIQGCEFSANNASDVGGALCYEAAAELTVSSSLISGNWAAYGGGALSVYGTNR-VYVEDTLFEDNYSSSKAQWVSSNFFPGGAVAIVGETELTLKTSVFARNGADRGGAMAVRGNNTVVVEDCRFEDNLSGVGGG 543
            I+A GG+ + + +      +A      GG+I     + E++   C FT   +   G A+ +  A A ++   F+   +      + GG + AD +  LE   C F  N    Q          ++ G    +   GC F ++      GA    +   L + +S +    A    GA  ++G+   V VE+ LFE N      +        GGA+AI     L ++ SVF RN A +GGA+A+  +   ++ DCRF  N +  GGG
Sbjct:  153 IEACGGASLTVRDCLFEANTAER----GGSIYAQDASIEIEG--CRFTGPGTEARGEAVYLLRADAEIKDSIFEDLFYVSADIPRGGGAVVADQS-TLELERCTFQRNATRFQG--------AHLWGRNADVTADGCAFGSSTG--YAGASISASGGTLRLMNSTVRLARAIQAPGA-GIFGSGADVLVENCLFELNRVEGTRE--------GGAIAIQAG-RLNVEGSVFLRNHAGQGGAIAISQSTNTLISDCRFVANAAPNGGG 392          
BLAST of mRNA_H-paniculata_contig4736.11766.1 vs. uniprot
Match: A0A7Y3I5T3_9BACT (Beta_helix domain-containing protein n=2 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Y3I5T3_9BACT)

HSP 1 Score: 57.4 bits (137), Expect = 7.010e-5
Identity = 53/170 (31.18%), Postives = 74/170 (43.53%), Query Frame = 0
Query:  422 SDVGGALCYEAAAE---LTVSSSLISGNWAAYGGGALSVYGTNRVYVEDTLFEDNYSSSKAQ---------WVSSNFF--------------------PGGAVAIVGETELTLKTSVFARNGA--DRGGAMAVRGNNTVVVEDCRFEDNLSGVGGGGVFFVSYPSSGPYS 557
            S  GGA+  E  A    LTV  S    N A+  GGA+ ++G+N+V +EDT F  N   S             V  + F                     GGA+    ++ L L+ S+F  N A   RGGA++   N T ++  C FEDN + + GG V     PS  P+S
Sbjct:  227 SGFGGAISTELFASPLSLTVLGSKFKNNSASIAGGAVFLFGSNQVTIEDTAFASNSGQSSGAIAFQTGMDLTVRRSLFLENTAREEITFGVPDVQEQIGGGAIGGGTDSVLLLEDSIFLNNRALAGRGGAVSCVDNTTSLIIRCYFEDNEAALQGGAVTNQEAPSVAPFS 396          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4736.11766.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D8LRF8_ECTSI4.230e-7337.01Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JWU3_9PHAE1.410e-3359.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUM3_9PHAE4.480e-3234.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CF41_9STRA3.130e-1137.36Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A835Z719_9STRA1.010e-1037.36UCH domain-containing protein n=2 Tax=Tribonema mi... [more]
A0A836CDQ4_9STRA5.320e-735.04Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A518ENH3_9BACT1.650e-526.22Beta_helix domain-containing protein n=1 Tax=Planc... [more]
A0A7Y3I5T3_9BACT7.010e-531.18Beta_helix domain-containing protein n=2 Tax=Phyci... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11319G PROTEIN-COUPLED RECEPTOR-RELATEDcoord: 260..578
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 155..188
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 189..700
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..154
NoneNo IPR availableTMHMMTMhelixcoord: 155..177
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 489..670
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 208..485

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4736contigH-paniculata_contig4736:2733..14157 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4736.11766.1mRNA_H-paniculata_contig4736.11766.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4736 2733..14159 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4736.11766.1 ID=prot_H-paniculata_contig4736.11766.1|Name=mRNA_H-paniculata_contig4736.11766.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=700bp
RCTFSTPREDRTAGVGATTERQHRQGKRVHPINGPPCEEGSQVSREEAFP
GARNPHRERSSRSASRSGPTVESRMVQSSRDHSSLVEWLLCRTYTRDGGG
HRQYCRCPRPGRPNRLLTAFRSCCFLGSSSASSSSPPFTIRKLHYYQHRG
RYRRLAAVVSTTANTLGAMAAAVTSILLRMNVVILLLLSSNSSPFGLSLL
GMTVAEAAVCSPADADVVVSDLVTLADLVERTTCSGGVFRVSWRGALTLT
EPLVVGNSTSLTVKGMGSEAAMDGGGSSRIIQAAGGSQVILENIELRNGS
APFASGGGGAINVDGENFELQATSCNFTKNYSPLDGGAIIITGAGAIVRF
DRSRFEENTAGQSGGFMRADSAFALEARDCVFSGNVALAQNGFGGSGGAI
YVSGGTPQMEIQGCEFSANNASDVGGALCYEAAAELTVSSSLISGNWAAY
GGGALSVYGTNRVYVEDTLFEDNYSSSKAQWVSSNFFPGGAVAIVGETEL
TLKTSVFARNGADRGGAMAVRGNNTVVVEDCRFEDNLSGVGGGGVFFVSY
PSSGPYSGSFTDCNFTSNWSGGSGGAIMALDMGNISFNGLLFWNNSVVYR
DDISGTGSHQGGAISVEGGGIVTVAKECLFRENLAGAAGGAVALQGGTFS
TVGCSFLENAVRFMGEGGAISATRGDAVLAAVVNLVGGDLRRNVAKDGLG
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011050Pectin_lyase_fold/virulence