prot_H-paniculata_contig4733.11763.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4733.11763.1
Unique Nameprot_H-paniculata_contig4733.11763.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length108
Homology
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BLAST of mRNA_H-paniculata_contig4733.11763.1 vs. uniprot
Match: A0A6H5JII8_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JII8_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 1.860e-12
Identity = 31/59 (52.54%), Postives = 46/59 (77.97%), Query Frame = 0 
Query:   26 KVISAFATIVSNVYFGYSRDQTSSYHHDLAFILWICLSCLVLTVFLLYWDARYGGSRLN 84
            +V+SA   I+SNV+FGYS+D+TSSY  D+  ++ +C+ CL LT+ LL+WDA++G S LN
Sbjct:  481 EVLSAIGNILSNVFFGYSKDRTSSYKDDMIALVVVCVVCLALTLLLLFWDAKHGKSLLN 539
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BLAST of mRNA_H-paniculata_contig4733.11763.1 vs. uniprot
Match: D7FMB1_ECTSI (MFS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMB1_ECTSI)

HSP 1 Score: 71.2 bits (173), Expect = 3.230e-12
Identity = 31/59 (52.54%), Postives = 46/59 (77.97%), Query Frame = 0 
Query:   26 KVISAFATIVSNVYFGYSRDQTSSYHHDLAFILWICLSCLVLTVFLLYWDARYGGSRLN 84
            +V+SA   I+SNV+FGYS+D+TSSY  D+  ++ +C+ CL LT+ LL+WDA++G S LN
Sbjct:  351 EVLSAIGNILSNVFFGYSKDRTSSYKDDMVSLVVVCVVCLGLTLLLLFWDAKHGKSLLN 409
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4733.11763.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JII8_9PHAE1.860e-1252.54MFS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FMB1_ECTSI3.230e-1252.54MFS domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..42
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 75..107
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 54..74
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 43..53
NoneNo IPR availableTMHMMTMhelixcoord: 21..40
NoneNo IPR availableTMHMMTMhelixcoord: 55..74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4733contigH-paniculata_contig4733:4907..5230 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4733.11763.1mRNA_H-paniculata_contig4733.11763.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4733 4519..6642 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4733.11763.1 ID=prot_H-paniculata_contig4733.11763.1|Name=mRNA_H-paniculata_contig4733.11763.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=108bp
MVQERRHAKHEYALFSSPLPFRSYLKVISAFATIVSNVYFGYSRDQTSSY
HHDLAFILWICLSCLVLTVFLLYWDARYGGSRLNLPRKDSAFMAIPSLPV
TNGQVTT*
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