prot_H-paniculata_contig47316.11761.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig47316.11761.1
Unique Name	prot_H-paniculata_contig47316.11761.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	299

Homology

[Close]

BLAST of mRNA_H-paniculata_contig47316.11761.1 vs. uniprot
Match: D1J788_ECTSI (DNA-directed RNA polymerase subunit beta' n=8 Tax=Ectocarpales TaxID=2877 RepID=D1J788_ECTSI)

HSP 1 Score: 596 bits (1536), Expect = 2.900e-210
Identity = 299/299 (100.00%), Postives = 299/299 (100.00%), Query Frame = 0

Query:    1 MVLHFIPVLPPGIRPIVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPSVVVLTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPHLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYSNEPFIWYLTEEILQKHPIILNRAPTLHRLGVQAFDPVLVRGRSIQLHPLVCSSFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSASSGEPTIQPSQDMVLGFYYLTTQNRTNLCGSNNYFSSFNEVI 299
            MVLHFIPVLPPGIRPIVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPSVVVLTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPHLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYSNEPFIWYLTEEILQKHPIILNRAPTLHRLGVQAFDPVLVRGRSIQLHPLVCSSFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSASSGEPTIQPSQDMVLGFYYLTTQNRTNLCGSNNYFSSFNEVI
Sbjct:  234 MVLHFIPVLPPGIRPIVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPSVVVLTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPHLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYSNEPFIWYLTEEILQKHPIILNRAPTLHRLGVQAFDPVLVRGRSIQLHPLVCSSFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSASSGEPTIQPSQDMVLGFYYLTTQNRTNLCGSNNYFSSFNEVI 532

[Close]

BLAST of mRNA_H-paniculata_contig47316.11761.1 vs. uniprot
Match: A0A6B7EVT1_9PHAE (DNA-directed RNA polymerase subunit gamma n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EVT1_9PHAE)

HSP 1 Score: 570 bits (1468), Expect = 6.110e-200
Identity = 284/299 (94.98%), Postives = 293/299 (97.99%), Query Frame = 0

Query:    1 MVLHFIPVLPPGIRPIVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPSVVVLTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPHLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYSNEPFIWYLTEEILQKHPIILNRAPTLHRLGVQAFDPVLVRGRSIQLHPLVCSSFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSASSGEPTIQPSQDMVLGFYYLTTQNRTNLCGSNNYFSSFNEVI 299
            MVL+F+PVLPPGIRPIVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPSVV+ TEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGP LKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIY NEPFIWYLTEEIL+KHPIILNRAPTLHRLGVQAFDPVL+RGR+IQLHPLVCSSFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLS SSGEPTIQPSQDMVLGFYYLTT+NR NL GSNNYF++FNEVI
Sbjct:  234 MVLYFLPVLPPGIRPIVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPSVVISTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYGNEPFIWYLTEEILKKHPIILNRAPTLHRLGVQAFDPVLIRGRAIQLHPLVCSSFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSSGEPTIQPSQDMVLGFYYLTTRNRKNLRGSNNYFANFNEVI 532

[Close]

BLAST of mRNA_H-paniculata_contig47316.11761.1 vs. uniprot
Match: A0A0R6MFT6_UNDPI (DNA-directed RNA polymerase subunit beta' n=25 Tax=Laminariales TaxID=2886 RepID=A0A0R6MFT6_UNDPI)

HSP 1 Score: 559 bits (1440), Expect = 8.300e-196
Identity = 277/299 (92.64%), Postives = 290/299 (96.99%), Query Frame = 0

Query:    1 MVLHFIPVLPPGIRPIVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPSVVVLTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPHLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYSNEPFIWYLTEEILQKHPIILNRAPTLHRLGVQAFDPVLVRGRSIQLHPLVCSSFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSASSGEPTIQPSQDMVLGFYYLTTQNRTNLCGSNNYFSSFNEVI 299
            MVLHF+PVLPPGIRP+VKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPSVV+LTEKRMIQEAVDTLIDNGKRGSK+LDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGP L+LNQCGLPYEMAIELFLPFIIY+LLSQGLSHSIK+AKKIIYSN+ FIWYLTEEIL+KHPIILNRAPTLHRLGVQAFDPVLVRGR+IQLHPLVC +FNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLS S+GEP IQPSQDMVLGFYYLT QNR  L GSNNYFS+FNEVI
Sbjct:  230 MVLHFLPVLPPGIRPMVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPSVVILTEKRMIQEAVDTLIDNGKRGSKVLDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLELNQCGLPYEMAIELFLPFIIYKLLSQGLSHSIKKAKKIIYSNQSFIWYLTEEILRKHPIILNRAPTLHRLGVQAFDPVLVRGRAIQLHPLVCPAFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSTGEPNIQPSQDMVLGFYYLTAQNRMGLKGSNNYFSNFNEVI 528

[Close]

BLAST of mRNA_H-paniculata_contig47316.11761.1 vs. uniprot
Match: A0A8F0F9J3_9PHAE (DNA-directed RNA polymerase subunit gamma n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9J3_9PHAE)

HSP 1 Score: 552 bits (1422), Expect = 4.480e-193
Identity = 271/298 (90.94%), Postives = 288/298 (96.64%), Query Frame = 0

Query:    2 VLHFIPVLPPGIRPIVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPSVVVLTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPHLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYSNEPFIWYLTEEILQKHPIILNRAPTLHRLGVQAFDPVLVRGRSIQLHPLVCSSFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSASSGEPTIQPSQDMVLGFYYLTTQNRTNLCGSNNYFSSFNEVI 299
            +LHF+PVLPPGIRP+VKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAP+VV+LTEKRMIQEAVDTLIDNGKRGSK+LDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGP L+LNQCGLPYEMAIELFLPF+IY+LLSQ LSHSIKRAKKIIYSN PFIW+LTEEIL+KHPIILNRAPTLHRLGVQAFDP+LVRGR+IQLHPLVC++FNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLS S+GEP IQPSQDMVLGFYYLT QNR  L G+NNYFS FNEVI
Sbjct:  231 ILHFLPVLPPGIRPMVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPNVVILTEKRMIQEAVDTLIDNGKRGSKVLDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLELNQCGLPYEMAIELFLPFLIYKLLSQELSHSIKRAKKIIYSNRPFIWHLTEEILRKHPIILNRAPTLHRLGVQAFDPILVRGRAIQLHPLVCAAFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSTGEPNIQPSQDMVLGFYYLTAQNRMQLKGANNYFSDFNEVI 528

[Close]

BLAST of mRNA_H-paniculata_contig47316.11761.1 vs. uniprot
Match: A0A141BSD2_9PHAE (DNA-directed RNA polymerase subunit beta' n=14 Tax=Sargassaceae TaxID=3014 RepID=A0A141BSD2_9PHAE)

HSP 1 Score: 541 bits (1393), Expect = 1.090e-188
Identity = 262/299 (87.63%), Postives = 288/299 (96.32%), Query Frame = 0

Query:    1 MVLHFIPVLPPGIRPIVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPSVVVLTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPHLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYSNEPFIWYLTEEILQKHPIILNRAPTLHRLGVQAFDPVLVRGRSIQLHPLVCSSFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSASSGEPTIQPSQDMVLGFYYLTTQNRTNLCGSNNYFSSFNEVI 299
            M+L F+PVLPPGIRP+VKL+NGRFATSDLNELYRKIIIRNKRLKRLLSVHAPS+V++TEKRMIQE+VDTLIDNGKRGSK++DAN+RPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGP L+LNQCGLPYEMAIELFLPFIIY+LLSQGL HSIK+AKKII+SN+PFIWYLT+EIL KHPIILNRAPTLHRLGVQAFDPVLV+GR+IQLHPLVC +FNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLS ++GEP IQPSQDM+LGFYYLTT NR  L G+NNYFSSF+EV+
Sbjct:  230 MILQFLPVLPPGIRPMVKLENGRFATSDLNELYRKIIIRNKRLKRLLSVHAPSIVIITEKRMIQESVDTLIDNGKRGSKVVDANRRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPKLQLNQCGLPYEMAIELFLPFIIYKLLSQGLCHSIKKAKKIIHSNQPFIWYLTKEILSKHPIILNRAPTLHRLGVQAFDPVLVKGRAIQLHPLVCPAFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPATGEPNIQPSQDMILGFYYLTTHNRLGLKGANNYFSSFHEVL 528

[Close]

BLAST of mRNA_H-paniculata_contig47316.11761.1 vs. uniprot
Match: D1GJH3_FUCVE (DNA-directed RNA polymerase subunit beta' n=3 Tax=Fucaceae TaxID=3010 RepID=D1GJH3_FUCVE)

HSP 1 Score: 538 bits (1387), Expect = 9.770e-188
Identity = 262/299 (87.63%), Postives = 285/299 (95.32%), Query Frame = 0

Query:    1 MVLHFIPVLPPGIRPIVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPSVVVLTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPHLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYSNEPFIWYLTEEILQKHPIILNRAPTLHRLGVQAFDPVLVRGRSIQLHPLVCSSFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSASSGEPTIQPSQDMVLGFYYLTTQNRTNLCGSNNYFSSFNEVI 299
            M+L+F+PVLPPGIRP+V+LDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPS+V++TEKRMIQE+VDTLIDNGKRGSK++D N+RPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGP L LNQCGLPYEMAIELFLPFIIYRLLSQGL HSIK+AKKIIYSN+ FIWYLT+EIL KHPIILNRAPTLHRLGVQAFDP+LV GR+IQLHPLVC +FNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLS S+GEP IQPSQDMVLGFYYLT QNR  L G+NNYFS+F+EV+
Sbjct:  230 MILNFLPVLPPGIRPMVQLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPSIVIMTEKRMIQESVDTLIDNGKRGSKVVDTNRRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPELHLNQCGLPYEMAIELFLPFIIYRLLSQGLCHSIKKAKKIIYSNQSFIWYLTKEILSKHPIILNRAPTLHRLGVQAFDPILVNGRAIQLHPLVCPAFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSTGEPNIQPSQDMVLGFYYLTAQNRIGLKGTNNYFSNFHEVL 528

[Close]

BLAST of mRNA_H-paniculata_contig47316.11761.1 vs. uniprot
Match: A0A8F0JZT2_9PHAE (DNA-directed RNA polymerase subunit gamma n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0JZT2_9PHAE)

HSP 1 Score: 530 bits (1365), Expect = 1.570e-184
Identity = 258/299 (86.29%), Postives = 284/299 (94.98%), Query Frame = 0

Query:    1 MVLHFIPVLPPGIRPIVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPSVVVLTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPHLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYSNEPFIWYLTEEILQKHPIILNRAPTLHRLGVQAFDPVLVRGRSIQLHPLVCSSFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSASSGEPTIQPSQDMVLGFYYLTTQNRTNLCGSNNYFSSFNEVI 299
            M+L+F+PVLPPG+RP+VKLD+GRFATSDLNELYRKII+RNKRL RLLSVHAP++V+ TEKRMIQEAVDTLIDNGKRGSK+LDAN+RPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGP L+LNQCGLPYEMAIELFLPF+I++LL QGL++SIKRAKKIIYSN  FIWYLTEE L+KHPIILNRAPTLHRLGVQAFDPVLVRGR+IQLHPLVC +FNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLS S+GEP IQP+QDMVLGFYYLT  NR  L G+NNYFS+FNEV+
Sbjct:  223 MILNFLPVLPPGLRPMVKLDSGRFATSDLNELYRKIILRNKRLGRLLSVHAPNIVITTEKRMIQEAVDTLIDNGKRGSKVLDANRRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLQLNQCGLPYEMAIELFLPFLIHKLLFQGLANSIKRAKKIIYSNRSFIWYLTEETLKKHPIILNRAPTLHRLGVQAFDPVLVRGRAIQLHPLVCPAFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSPSTGEPNIQPTQDMVLGFYYLTANNRMQLKGANNYFSNFNEVV 521

[Close]

BLAST of mRNA_H-paniculata_contig47316.11761.1 vs. uniprot
Match: A0A8F0JYE1_9PHAE (DNA-directed RNA polymerase subunit gamma n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0JYE1_9PHAE)

HSP 1 Score: 497 bits (1279), Expect = 1.780e-171
Identity = 244/299 (81.61%), Postives = 274/299 (91.64%), Query Frame = 0

Query:    1 MVLHFIPVLPPGIRPIVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPSVVVLTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPHLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYSNEPFIWYLTEEILQKHPIILNRAPTLHRLGVQAFDPVLVRGRSIQLHPLVCSSFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSASSGEPTIQPSQDMVLGFYYLTTQNRTNLCGSNNYFSSFNEVI 299
            MVL+ +PVLPPGIRP++++ NGRFATSDLNELYRKIIIRN RL RL+SVHAP++++ TEKRMIQE+VD LIDNGKRG K+LD++KRPLKSLADIIEGKQGRFR NLLGKR DYSGRSVIIVGP L LNQCGLPYEMAIELFLPFII++LL QGL +SIK+AKKII+SN+ FIW+L +EIL +HPIILNRAPTLHRLGVQAFDPVLVRGR+IQLHPLVC +FNADFDGDQMAVHIPLSFESQLETRLCLLA NNFLS ++GE  I PSQDMVLGFYYLTTQNR  L G+NNYFS+FNEVI
Sbjct:  225 MVLNCLPVLPPGIRPMIQMANGRFATSDLNELYRKIIIRNNRLGRLISVHAPNMIIKTEKRMIQESVDALIDNGKRGEKVLDSHKRPLKSLADIIEGKQGRFRLNLLGKRTDYSGRSVIIVGPQLALNQCGLPYEMAIELFLPFIIHKLLFQGLVYSIKKAKKIIFSNDSFIWFLLKEILIQHPIILNRAPTLHRLGVQAFDPVLVRGRAIQLHPLVCPAFNADFDGDQMAVHIPLSFESQLETRLCLLATNNFLSPATGEANIHPSQDMVLGFYYLTTQNRMKLKGANNYFSNFNEVI 523

[Close]

BLAST of mRNA_H-paniculata_contig47316.11761.1 vs. uniprot
Match: A0A8E6D698_9PHAE (DNA-directed RNA polymerase subunit beta' n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E6D698_9PHAE)

HSP 1 Score: 495 bits (1275), Expect = 8.990e-171
Identity = 237/299 (79.26%), Postives = 278/299 (92.98%), Query Frame = 0

Query:    1 MVLHFIPVLPPGIRPIVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPSVVVLTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPHLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYSNEPFIWYLTEEILQKHPIILNRAPTLHRLGVQAFDPVLVRGRSIQLHPLVCSSFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSASSGEPTIQPSQDMVLGFYYLTTQNRTNLCGSNNYFSSFNEVI 299
            M+L+F+PV+PPG+RPI+KL+NGRFA+SDLNELYR+IIIRNKRL RL+SVHAPSVV+ TE RMIQE++DTLIDNGKRG+ ++D++KRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGP L+LNQCGLPYEMAIELFLPF++++L+ QGL++SI +AKKIIY+N+ FIW L +EIL +HP+ILNRAPTLHRLGVQAFD +LV GR+IQLHPLVC +FNADFDGDQMAVHIPLSFESQ+ETRLCLLAPNNFLS ++G+P IQP+QDMVLGFYYLT QN TNL GSN+YF SF EVI
Sbjct:  232 MLLYFLPVIPPGLRPIIKLENGRFASSDLNELYRRIIIRNKRLGRLMSVHAPSVVLNTETRMIQESIDTLIDNGKRGATVVDSHKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLELNQCGLPYEMAIELFLPFLMHKLIYQGLANSINKAKKIIYNNKSFIWGLLKEILGRHPVILNRAPTLHRLGVQAFDAILVTGRAIQLHPLVCPAFNADFDGDQMAVHIPLSFESQIETRLCLLAPNNFLSPATGDPVIQPTQDMVLGFYYLTAQNHTNLKGSNHYFGSFEEVI 530

[Close]

BLAST of mRNA_H-paniculata_contig47316.11761.1 vs. uniprot
Match: A0A2I4Q2A7_9PHAE (DNA-directed RNA polymerase subunit beta' n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2A7_9PHAE)

HSP 1 Score: 486 bits (1250), Expect = 4.540e-167
Identity = 238/299 (79.60%), Postives = 267/299 (89.30%), Query Frame = 0

Query:    1 MVLHFIPVLPPGIRPIVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVHAPSVVVLTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQGRFRQNLLGKRVDYSGRSVIIVGPHLKLNQCGLPYEMAIELFLPFIIYRLLSQGLSHSIKRAKKIIYSNEPFIWYLTEEILQKHPIILNRAPTLHRLGVQAFDPVLVRGRSIQLHPLVCSSFNADFDGDQMAVHIPLSFESQLETRLCLLAPNNFLSASSGEPTIQPSQDMVLGFYYLTTQNRTNLCGSNNYFSSFNEVI 299
            M+ + +PVLPPG+RPIV+LDNGR ATSDLNE YRKI+IR +RL RLLSV APS+++ TEKRMIQE+VD LIDNGKRG K+LD +KRPLKSLA++IEGKQGRFRQNLLGKRVDYSGRSVIIVGP L LNQCGLPYEMA+ELFLPF+I+++    L+ SIK AKKIIYSN+ FIWYL +EIL KHPIILNRAPTLHRLGVQAFDPVLV GR+IQLHPLVC +FNADFDGDQMAVHIPLS ESQLETRLCLLA NNFLS ++GEP I PSQDMVLGFYYLTTQNR  L G+NNYFS+FNEVI
Sbjct:  226 MIFNVLPVLPPGLRPIVQLDNGRLATSDLNEFYRKILIRTQRLGRLLSVQAPSMIIFTEKRMIQESVDALIDNGKRGPKVLDIHKRPLKSLAEMIEGKQGRFRQNLLGKRVDYSGRSVIIVGPQLHLNQCGLPYEMAVELFLPFLIHKIFFLKLAGSIKTAKKIIYSNKSFIWYLLKEILNKHPIILNRAPTLHRLGVQAFDPVLVTGRAIQLHPLVCPAFNADFDGDQMAVHIPLSLESQLETRLCLLATNNFLSPATGEPNILPSQDMVLGFYYLTTQNRIKLKGNNNYFSTFNEVI 524

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig47316.11761.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig47316.11761.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D1J788_ECTSI	2.900e-210	100.00	DNA-directed RNA polymerase subunit beta' n=8 Tax=...	[more]
A0A6B7EVT1_9PHAE	6.110e-200	94.98	DNA-directed RNA polymerase subunit gamma n=1 Tax=...	[more]
A0A0R6MFT6_UNDPI	8.300e-196	92.64	DNA-directed RNA polymerase subunit beta' n=25 Tax...	[more]
A0A8F0F9J3_9PHAE	4.480e-193	90.94	DNA-directed RNA polymerase subunit gamma n=1 Tax=...	[more]
A0A141BSD2_9PHAE	1.090e-188	87.63	DNA-directed RNA polymerase subunit beta' n=14 Tax...	[more]
D1GJH3_FUCVE	9.770e-188	87.63	DNA-directed RNA polymerase subunit beta' n=3 Tax=...	[more]
A0A8F0JZT2_9PHAE	1.570e-184	86.29	DNA-directed RNA polymerase subunit gamma n=1 Tax=...	[more]
A0A8F0JYE1_9PHAE	1.780e-171	81.61	DNA-directed RNA polymerase subunit gamma n=1 Tax=...	[more]
A0A8E6D698_9PHAE	8.990e-171	79.26	DNA-directed RNA polymerase subunit beta' n=1 Tax=...	[more]
A0A2I4Q2A7_9PHAE	4.540e-167	79.60	DNA-directed RNA polymerase subunit beta' n=1 Tax=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006592	RNA polymerase, N-terminal	SMART	SM00663	rpolaneu7	coord: 1..278 e-value: 2.9E-144 score: 495.3
IPR007066	RNA polymerase Rpb1, domain 3	PFAM	PF04983	RNA_pol_Rpb1_3	coord: 253..296 e-value: 8.1E-7 score: 29.1
IPR042102	RNA polymerase Rpb1, domain 3 superfamily	GENE3D	1.10.274.100		coord: 253..299 e-value: 2.0E-13 score: 52.9
IPR007080	RNA polymerase Rpb1, domain 1	PFAM	PF04997	RNA_pol_Rpb1_1	coord: 1..106 e-value: 3.6E-38 score: 131.7
None	No IPR available	GENE3D	2.40.40.20		coord: 111..243 e-value: 2.3E-45 score: 156.1
None	No IPR available	GENE3D	1.10.40.90		coord: 134..182 e-value: 2.3E-45 score: 156.1
None	No IPR available	PANTHER	PTHR19376	DNA-DIRECTED RNA POLYMERASE	coord: 1..286
None	No IPR available	PANTHER	PTHR19376:SF32	DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC1	coord: 1..286
None	No IPR available	SUPERFAMILY	64484	beta and beta-prime subunits of DNA dependent RNA-polymerase	coord: 1..297
IPR000722	RNA polymerase, alpha subunit	PFAM	PF00623	RNA_pol_Rpb1_2	coord: 173..245 e-value: 1.0E-22 score: 81.2 coord: 108..163 e-value: 1.4E-9 score: 38.4

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig47316	contig	H-paniculata_contig47316:21..917 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig47316.11761.1	mRNA_H-paniculata_contig47316.11761.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig47316 21..929 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig47316.11761.1 ID=prot_H-paniculata_contig47316.11761.1|Name=mRNA_H-paniculata_contig47316.11761.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=299bp
MVLHFIPVLPPGIRPIVKLDNGRFATSDLNELYRKIIIRNKRLKRLLSVH
APSVVVLTEKRMIQEAVDTLIDNGKRGSKILDANKRPLKSLADIIEGKQG
RFRQNLLGKRVDYSGRSVIIVGPHLKLNQCGLPYEMAIELFLPFIIYRLL
SQGLSHSIKRAKKIIYSNEPFIWYLTEEILQKHPIILNRAPTLHRLGVQA
FDPVLVRGRSIQLHPLVCSSFNADFDGDQMAVHIPLSFESQLETRLCLLA
PNNFLSASSGEPTIQPSQDMVLGFYYLTTQNRTNLCGSNNYFSSFNEVI

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006592	RNA_pol_N
IPR007066	RNA_pol_Rpb1_3
IPR042102	RNA_pol_Rpb1_3_sf
IPR007080	RNA_pol_Rpb1_1
IPR000722	RNA_pol_asu