mRNA_H-paniculata_contig47297.11755.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig47297.11755.1 vs. uniprot
Match: A0A151ITN2_9HYME (Copia protein n=1 Tax=Trachymyrmex cornetzi TaxID=471704 RepID=A0A151ITN2_9HYME) HSP 1 Score: 63.5 bits (153), Expect = 7.480e-9 Identity = 44/148 (29.73%), Postives = 72/148 (48.65%), Query Frame = 1
Query: 10 KQLRCFICRSKDHLQRDCPNALKVDLGEDEYIASYI------ASTFTIGKQEVLSVDSEGLEYREVGEIEIWICDSGATKHMTHNSDFRFDYQQCNG-HVRLADGNRLPIEGVGMLFLRFRFDSTVVLMKLTQVAFIPLLSHHLLSLG 432
K++ CF C H +DC + ED+ I S ++T EV+ + LE ++V WI DSGA++HMTH S++ + Q HV L DG + + G G ++++ D + L V ++P L+ +L S+G
Sbjct: 225 KEIECFYCHKLGHYIKDCRKKRR---DEDQGIRSKEKQKNNESNTEAAFSAEVIEKEILNLEVKDV-----WILDSGASRHMTHRSNWISNLQTYKDEHVSLGDGTKCKVHGRGTVYIQRLVDGQWLDGVLEDVLYVPDLNKNLFSVG 364
BLAST of mRNA_H-paniculata_contig47297.11755.1 vs. uniprot
Match: A0A0J7N723_LASNI (Copia protein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7N723_LASNI) HSP 1 Score: 61.2 bits (147), Expect = 4.360e-8 Identity = 38/155 (24.52%), Postives = 66/155 (42.58%), Query Frame = 1
Query: 10 KQLRCFICRSKDHLQRDCPNALKVDLGEDE----------YIASYIASTFT-IGKQEVLSVDSEGLEYREVGEIEIWICDSGATKHMTHNSDF--RFDYQQCNGHVRLADGNRLPIEGVGMLFLRFRFDSTVVLMKLTQVAFIPLLSHHLLSLGK 435
K + CF C K H R+C N D+ ++ T K+E +VD G + ++WI DSGA+KH+T+ ++ +F+ V L D + + G G + + D ++ V ++P + +L S+GK
Sbjct: 229 KDIECFKCGKKGHFARECKNNRSEKKTRDDSESRETRDCAFVVEASGKTSNKCSKEEESAVDKAGRQILSADLSDVWITDSGASKHITYRREWFNKFEVTNRGDSVSLGDNKKYDVVGEGTILIEKFVDGAWREAQIKNVIYVPEIKKNLFSVGK 383
BLAST of mRNA_H-paniculata_contig47297.11755.1 vs. uniprot
Match: A0A0V1M1K0_9BILA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=13 Tax=Trichinella TaxID=6333 RepID=A0A0V1M1K0_9BILA) HSP 1 Score: 61.2 bits (147), Expect = 5.300e-8 Identity = 42/157 (26.75%), Postives = 74/157 (47.13%), Query Frame = 1
Query: 4 KSKQLRCFICRSKDHLQRDCPNALKVDLGEDEYIASYIASTFTIGKQEVLSVDSEGLEYREVGEIEIWICDSGATKHMTHNSDFRFDY----QQCNGHVRLADGNRLPIEGVGMLFLRFRFDSTVVLMKLTQVAFIPLLSHHLLSLGKFADFGHEYS 462
K + RCF C HL ++C + G+ S+ +F + E D+ +W+ DSGA++HMTHN ++ D+ Q N V++ +G+ +P G G + + +L ++ V ++P L +L S+GK AD G ++
Sbjct: 228 KKDKRRCFKCHRIGHLAKNCTMKTVKNAGQSRQ--SFGGGSFFCYRAE----DNRNT-------CRMWLADSGASQHMTHNKEYLADFVTFPQPVN--VKIRNGDAIPAYGRGTVNFKVFIKGKWILNRMEDVWYVPKLGLNLFSIGKAADKGFYFT 369
BLAST of mRNA_H-paniculata_contig47297.11755.1 vs. uniprot
Match: A0A7R8YZG1_HERIL (Hypothetical protein n=1 Tax=Hermetia illucens TaxID=343691 RepID=A0A7R8YZG1_HERIL) HSP 1 Score: 57.4 bits (137), Expect = 9.540e-7 Identity = 38/159 (23.90%), Postives = 67/159 (42.14%), Query Frame = 1
Query: 4 KSKQLRCFICRSKDHLQRDC-------PNALKVDLGEDEYIASYIASTFTIGKQEVLSVDSEGLEYREVGEIEIWICDSGATKHMTHNSDFRFDYQQCNGH-VRLADGNRLPIEGVGMLFLRFRFDSTVVLMKLTQVAFIPLLSHHLLSLGKFADFGHE 456
++K + C CR K HL RDC NA + L E + IA V ++WI DSGA++H+T+ D+ +++ +G + L D + G G + + + ++ V ++P + +L S+G D G +
Sbjct: 203 RNKSVECVYCRRKGHLARDCRKKKRDTDNANENPLPNSEVVERLIA----------------------VDTSDVWITDSGASRHITYRRDWYSEFESSSGESISLGDNGVCEVTGSGTVLIDRLVNGKWCKARIENVLYVPKIRKNLFSVGVCTDKGFD 339
BLAST of mRNA_H-paniculata_contig47297.11755.1 vs. uniprot
Match: A0A7R8UG25_HERIL (Hypothetical protein n=1 Tax=Hermetia illucens TaxID=343691 RepID=A0A7R8UG25_HERIL) HSP 1 Score: 57.0 bits (136), Expect = 1.520e-6 Identity = 40/159 (25.16%), Postives = 78/159 (49.06%), Query Frame = 1
Query: 4 KSKQLRCFICRSKDHLQRDCPNALKV--DLGEDEYIASYIASTFTI----GKQEVLSVDSEGLE-YREVGEIEIWICDSGATKHMTHNSDFRFDYQQCNGHVRLADGNRL-PIEGVGMLFLRFRFDSTVVLMKLTQVAFIPLLSHHLLSLGKFADFGHE 456
+++ + CF C+ K HL RDC + + E+ +++AST GK E + +SE +E V ++WI DSGA++H+T+ D+ +++ +G GN + + G + + + ++ V ++P + +L S+G D G +
Sbjct: 125 RNESVECFYCKRKGHLARDCRKKKRDTDNANENPRKCTFVASTREHKQLQGKSETVP-NSEVVERLMAVDTSDVWITDSGASRHITYRWDWYSEFESSSGESISLGGNGVCEVTGTCTVLIDRLVNGKWCKARIENVLYVPKIRKNLFSVGVCTDKGFD 282
BLAST of mRNA_H-paniculata_contig47297.11755.1 vs. uniprot
Match: A0A8J6LF05_TENMO (Uncharacterized protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6LF05_TENMO) HSP 1 Score: 55.8 bits (133), Expect = 3.910e-6 Identity = 35/156 (22.44%), Postives = 68/156 (43.59%), Query Frame = 1
Query: 10 KQLRCFICRSKDHLQRDCPNALKVD----LGEDEYIASYIASTFT-----IGKQEVLSVDSEGLEYREVGEIEIWICDSGATKHMTHNSDFRFDYQQCN--GHVRLADGNRLPIEGVGMLFLRFRFDSTVVLMKLTQVAFIPLLSHHLLSLGKFAD 444
K + C+ C+ + H R+C + + G+D +++A K +DS E R ++WI DSGA++H+T D+ +Y+ G + L D I G G + + + ++ V ++P + +L S+G + +
Sbjct: 227 KDVECYKCKKRGHFARECRSKKSENQNGSAGKDTRDCAFVAEKHRQQSKMCDKSNTKLLDSAINEVRNARNEDVWITDSGASRHITRRRDWFSEYRVLTNGGPISLGDNKECKIVGEGTVLIEKCVNDEWRNARIENVLYVPEMKKNLFSVGDYVN 382
BLAST of mRNA_H-paniculata_contig47297.11755.1 vs. uniprot
Match: A0A8J6LGG0_TENMO (Uncharacterized protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6LGG0_TENMO) HSP 1 Score: 55.1 bits (131), Expect = 6.800e-6 Identity = 37/160 (23.12%), Postives = 68/160 (42.50%), Query Frame = 1
Query: 10 KQLRCFICRSKDHLQRDCPNALKVD----LGEDEYIASYIASTFT-----IGKQEVLSVDSEGLEYREVGEIEIWICDSGATKHMTHNSDFRFDYQQCN--GHVRLADGNRLPIEGVGMLFLRFRFDSTVVLMKLTQVAFIPLLSHHLLSLGKFADFGHE 456
K + C+ C+ + H R+C + + G+D +++A K +DS E R ++WI DSGA++H+T D+ +Y+ G + L D I G G + + + ++ V ++P + +L S+G G E
Sbjct: 227 KDVECYKCKKRGHFARECRSKKSENQNGRAGKDTRDCAFVAEKHRQQSKMCDKSNTKLLDSAINEVRNARNEDVWITDSGASRHITRRRDWFSEYRVLTNGGTISLGDNKECKIVGEGTVLIEKCVNDEWRNARIENVLYVPEMKKNLFSVGMCTTRGLE 386
BLAST of mRNA_H-paniculata_contig47297.11755.1 vs. uniprot
Match: A0A0J7KAC3_LASNI (Retrovirus-related pol polyprotein from transposon tnt 1-94 n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7KAC3_LASNI) HSP 1 Score: 55.1 bits (131), Expect = 6.920e-6 Identity = 38/162 (23.46%), Postives = 74/162 (45.68%), Query Frame = 1
Query: 10 KQLRCFICRSKDHLQRDCPNALKVDLGEDEYIA----SYIASTFTIGKQEVLSVDSE--------GLEYREVGEIEIWICDSGATKHMTHNSDFRFDYQQCNG-HVRLADGNRLPIEGVGMLFLRFRFDSTVVLMKLTQVAFIPLLSHHLLSLGKFADFGHE 456
K C C+ K H ++C + + E+E + +++A+ +V S L +E+ ++ WI DSGA++H+TH D+ DYQ +G + L D + GVG + + + ++ +V ++P + +L S+G G++
Sbjct: 25 KDFECHYCKKKGHYAKNCRKKRRDEETEEEIGSGKNHAFVATCTDNSHIQVQKAASAYPTDEQMAALVNKEIRDV--WITDSGASRHITHRKDWLTDYQPISGVTIALGDDDVCQAIGVGTVHIEKLVNGKWCEGRIEEVLYVPKMKKNLFSVGVCTTKGYD 184
BLAST of mRNA_H-paniculata_contig47297.11755.1 vs. uniprot
Match: A0A8J6HGM3_TENMO (Uncharacterized protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6HGM3_TENMO) HSP 1 Score: 55.1 bits (131), Expect = 7.260e-6 Identity = 37/160 (23.12%), Postives = 68/160 (42.50%), Query Frame = 1
Query: 10 KQLRCFICRSKDHLQRDCPNALKVD----LGEDEYIASYIASTFT-----IGKQEVLSVDSEGLEYREVGEIEIWICDSGATKHMTHNSDFRFDYQQCN--GHVRLADGNRLPIEGVGMLFLRFRFDSTVVLMKLTQVAFIPLLSHHLLSLGKFADFGHE 456
K + C+ C+ + H R+C + + G+D +++A K +DS E R ++WI DSGA++H+T D+ +Y+ G + L D I G G + + + ++ V ++P + +L S+G G E
Sbjct: 546 KDVECYKCKKRGHFARECRSKKNENQNGGAGKDTRDCAFVAEKHRQQSKMCDKSNTKLLDSAINEVRNARNEDVWITDSGASRHITRRRDWFSEYRVLTNGGTISLGDNKECKIVGEGTVLIEKCVNDEWRNARIENVLYVPEMKKNLFSVGMCTTRGLE 705
BLAST of mRNA_H-paniculata_contig47297.11755.1 vs. uniprot
Match: A0A8J6LGF6_TENMO (Uncharacterized protein n=1 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6LGF6_TENMO) HSP 1 Score: 55.1 bits (131), Expect = 7.370e-6 Identity = 37/160 (23.12%), Postives = 68/160 (42.50%), Query Frame = 1
Query: 10 KQLRCFICRSKDHLQRDCPNALKVD----LGEDEYIASYIASTFT-----IGKQEVLSVDSEGLEYREVGEIEIWICDSGATKHMTHNSDFRFDYQQCN--GHVRLADGNRLPIEGVGMLFLRFRFDSTVVLMKLTQVAFIPLLSHHLLSLGKFADFGHE 456
K + C+ C+ + H R+C + + G+D +++A K +DS E R ++WI DSGA++H+T D+ +Y+ G + L D I G G + + + ++ V ++P + +L S+G G E
Sbjct: 686 KDVECYKCKKRGHFARECRSKKNENQNGSAGKDTRDCAFVAEKHRQQSKMCDKSNTKLLDSAINEVRNARNEDVWITDSGASRHITRRRDWFSEYRVLTNGGTISLGDNKECKIVGEGTVLIEKCVNDEWRNARIENVLYVPEMKKNLFSVGMCTTRGLE 845 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig47297.11755.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig47297.11755.1 >prot_H-paniculata_contig47297.11755.1 ID=prot_H-paniculata_contig47297.11755.1|Name=mRNA_H-paniculata_contig47297.11755.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=154bp TKSKQLRCFICRSKDHLQRDCPNALKVDLGEDEYIASYIASTFTIGKQEVback to top mRNA from alignment at H-paniculata_contig47297:667..1239+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig47297.11755.1 ID=mRNA_H-paniculata_contig47297.11755.1|Name=mRNA_H-paniculata_contig47297.11755.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=573bp|location=Sequence derived from alignment at H-paniculata_contig47297:667..1239+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig47297:667..1239+ >mRNA_H-paniculata_contig47297.11755.1 ID=mRNA_H-paniculata_contig47297.11755.1|Name=mRNA_H-paniculata_contig47297.11755.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=924bp|location=Sequence derived from alignment at H-paniculata_contig47297:667..1239+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |