mRNA_H-paniculata_contig47271.11750.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig47271.11750.1 vs. uniprot
Match: A0A7D9KES8_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9KES8_PARCT) HSP 1 Score: 314 bits (805), Expect = 7.230e-97 Identity = 177/439 (40.32%), Postives = 268/439 (61.05%), Query Frame = 1
Query: 1 VAQGFSQVEGEDFFETSAPVARMSTLRTVFSLAAEHDFELEGMDVDATYLNAPVEKELFVQLPPEFSHFSRDIPFVRRPRKSLYGLKQSGRNWNNTLDDFLVGIGRECSFTDSCLYFFRDEGGETNLLVAVYVDNLVIAGRRE-KVDEFKHNVSQRFRMKDSGSLSRVLGIEVRCDRPNGTITISQGSYIREVLKRYGFDECRGVPTPVEGKVKISAPDSADKPSESKSGTSIEYRGMVGSLMYASTRTRPDIAYAVHQAARCMEDPCQEDFSRCKRIFRYLSTVPDFGITFGGKSNGHGLEGFVDAEWAVDAEDRKSTTGYFFKLNGGAISLCSRKQ*LVTWSSTEAEYVAAGEAGKETVYLRELLGSIGFGCRRSTTLFEDNKSAINLSKAFGAHCRTKHIGVRWHGIREWIREGILALKYVETGDQVADILTKGLS 1314
VAQGFSQ G+D+ ET +PVAR ++RTV +LAA+H +L MDV +LN +++E++++ F ++ V R R+S+YGLKQS R WN+ LD L +G + D C+Y ++EGGE ++AVYVD++++AG+ + K++E K ++++F+MKD G L LG++V + I I Q +Y + VL+R+G + + TPV K+ +AD +S+ + Y+ VG L+Y ST+TRPDIAYAV AR DP +E + KRI RYL+ D G+ + G G+ DA+WA D +DRKST+GY F+++ AIS S+KQ V S+ EAEY+A A +E V+L++LL + + EDN++AI ++K H R KHI +++H IRE + + L+Y T + +ADI TKGLS
Sbjct: 50 VAQGFSQTFGDDYDETFSPVARFESVRTVIALAAQHGLKLHQMDVTTAFLNGDLKEEVYMKQTEGFIEKGKEH-LVCRLRRSIYGLKQSPRCWNSVLDRKLKNMGFVQTTGDPCIYV-KEEGGEI-FIIAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQLHYFLGVKVIPKPDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTKLKK--AAD---DSQRVDQVNYQCAVGHLLYLSTKTRPDIAYAVSDVARFSADPTEEHWIAVKRIMRYLNGTRDMGLLYDGSKTTTSCVGYSDADWAGDLDDRKSTSGYVFQISNAAISWRSKKQSCVALSTAEAEYMALASATQEAVWLQQLLSDLKSKPTGPMLILEDNQAAICMAKNAQYHGRAKHIDIKYHFIREHVASAAVKLEYCSTEEMIADIFTKGLS 480
BLAST of mRNA_H-paniculata_contig47271.11750.1 vs. uniprot
Match: A0A4Y9ZJA2_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZJA2_9AGAM) HSP 1 Score: 322 bits (824), Expect = 5.250e-95 Identity = 185/440 (42.05%), Postives = 261/440 (59.32%), Query Frame = 1
Query: 1 VAQGFSQVEGEDFFETSAPVARMSTLRTVFSLAAEHDFELEGMDVDATYLNAPVEKELFVQLPPEFSHFSRDIPFVRRPRKSLYGLKQSGRNWNNTLDDFLVGIGRECSFTDSCLYFFRDEGGETNLLVAVYVDNLVIAGRR-EKVDEFKHNVSQRFRMKDSGSLSRVLGIEVRCDRPNGTITISQGSYIREVLKRYGFDECRGVPTPVEGKVKISAPDSADKPSESKSGTSIEYRGMVGSLMYASTRTRPDIAYAVHQAARCMEDPCQEDFSRCKRIFRYLSTVPDFGITFGGKSNGHGLEGFVDAEWAVDAEDRKSTTGYFFKLNGGAISLCSRKQ*LVTWSSTEAEYVAAGEAGKETVYLRELLGSIGFGCRRSTTLFEDNKSAINLSKAFGAHCRTKHIGVRWHGIREWIREGILALKYVETGDQVADILTKGLSR 1317
VA+GF+QVEG DF ET APV + ++LRT+ +L A+HD EL MDV YLN +E+E++++ PP F D V R KS+YGLKQ+GR W ++ +G S+ D ++ F + T L++ +YVD++ A E + + K +S+ F + D G + +LG+EV DR +T+SQ YI +VL+R+GF + R + TPV K+ +A+ + +Y+ VGSLMYA TRPDIAYAV ++ P E ++ R F+YL D+ + + GK L G+VD++WA D DR+S +GY F L G AIS S+KQ V SSTEAEY+AA A KE V+LR LL + R T L DN+ AI L+K H TKHI VR H +R+ + +G +A +Y+ T DQVAD+LTKGLSR
Sbjct: 963 VAKGFTQVEGIDFDETFAPVMKFNSLRTLLALTAKHDLELHQMDVKTAYLNGDLEEEIYMEPPPGFRG---DGNIVWRLIKSIYGLKQAGRVWYMRIEREFRDLGYSRSYADYGVFVFHRDSDGTLLIIIIYVDDIGAASNSMEAILQAKARLSKIFEITDLGEMRWILGMEVTRDRALKIVTLSQKRYIADVLERHGFADARPISTPVSVNQKLEKLPAAEIDAR-------KYQSAVGSLMYAMLGTRPDIAYAVGLLSQHSSAPGAEHWNVAARTFKYLRRTADYQLVYNGKRKNDELTGYVDSDWANDPNDRRSISGYVFTLAGAAISWSSKKQQSVAQSSTEAEYMAAAHATKEAVWLRMLLSDLRQPIERPTPLLIDNQGAIALAKNPAYHACTKHIDVRHHFLRDKVEDGTIAAEYIPTADQVADVLTKGLSR 1392
BLAST of mRNA_H-paniculata_contig47271.11750.1 vs. uniprot
Match: A0A5S6QJX2_TRIMR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Trichuris muris TaxID=70415 RepID=A0A5S6QJX2_TRIMR) HSP 1 Score: 302 bits (774), Expect = 1.220e-94 Identity = 175/441 (39.68%), Postives = 263/441 (59.64%), Query Frame = 1
Query: 1 VAQGFSQVEGEDFFETSAPVARMSTLRTVFSLAAEHDFELEGMDVDATYLNAPVEKELFVQLPPEFSHFSRDIPFVRRPRKSLYGLKQSGRNWNNTLDDFLVGIGRECSFTDSCLYFFRDEGGETNLLVAVYVDNLVIAGRREKVD-EFKHNVSQRFRMKDSGSLSRVLGIEVRCDRPNGTITISQGSYIREVLKRYGFDECRGVPTPVEGKVKISAPDSADKPSESKSGTSIEYRGMVGSLMYASTRTRPDIAYAVHQAARCMEDPCQEDFSRCKRIFRYLSTVPDFGITFGGKSNGH-GLEGFVDAEWAVDAEDRKSTTGYFFKLNGGAISLCSRKQ*LVTWSSTEAEYVAAGEAGKETVYLRELLGSIGFGCRRSTTLFEDNKSAINLSKAFGAHCRTKHIGVRWHGIREWIREGILALKYVETGDQVADILTKGLSR 1317
VA+GFSQ++G D+ +T APV R T+R +F++ A + + +DV YLN +++ELF++ PP FS + V R R+SLYGLKQS R WN D L +G + D CL F R E T V +YVD+L+IAG ++ + ++ F +KD G + + LG++V + +G+ + Q + +R +LK +G + + V TP+E S + + K ++ EYR +GSL+Y +T TRPDI++AV Q RCME P Q D+ KR+ RYL+ P + F +NG L GFVDA+WA D DRKST+GY FK+ ++ SRKQ V SSTEAEY+AA EA ++ +++R++L IG T ++EDN+ I ++++ RTKHI +R+H +RE GI+AL Y + + AD+LTK L++
Sbjct: 45 VARGFSQIQGRDYDKTFAPVVRHETVRILFAVVAMKNMHVRHVDVKTAYLNGKLDEELFLEPPPGFSQPTTGGK-VLRLRRSLYGLKQSARVWNQVATDALQKLGFRPNRADPCL-FSRSEKNNTMSYVLLYVDDLLIAGSSPELTCDVGKQLNSYFEIKDLGEVRQYLGMQVEREE-DGSFLLYQAAKVRHLLKEHGLLDAKPVATPMEANFLSSTEEESPKLPDNA-----EYRKAIGSLLYLATATRPDISFAVGQLCRCMEHPTQRDWKAVKRVMRYLAGSPYRKLRF--SANGSIKLSGFVDADWAGDQADRKSTSGYAFKVGTSTVAWSSRKQSFVALSSTEAEYIAASEACRDLLWIRQVLEDIGIEQVEPTIVYEDNQGCIKMAQSERHTRRTKHIDIRYHQLRELQESGIIALTYCPSNEMPADMLTKPLTK 475
BLAST of mRNA_H-paniculata_contig47271.11750.1 vs. uniprot
Match: A0A6S7JEY7_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JEY7_PARCT) HSP 1 Score: 307 bits (786), Expect = 1.300e-94 Identity = 174/439 (39.64%), Postives = 265/439 (60.36%), Query Frame = 1
Query: 1 VAQGFSQVEGEDFFETSAPVARMSTLRTVFSLAAEHDFELEGMDVDATYLNAPVEKELFVQLPPEFSHFSRDIPFVRRPRKSLYGLKQSGRNWNNTLDDFLVGIGRECSFTDSCLYFFRDEGGETNLLVAVYVDNLVIAGRRE-KVDEFKHNVSQRFRMKDSGSLSRVLGIEVRCDRPNGTITISQGSYIREVLKRYGFDECRGVPTPVEGKVKISAPDSADKPSESKSGTSIEYRGMVGSLMYASTRTRPDIAYAVHQAARCMEDPCQEDFSRCKRIFRYLSTVPDFGITFGGKSNGHGLEGFVDAEWAVDAEDRKSTTGYFFKLNGGAISLCSRKQ*LVTWSSTEAEYVAAGEAGKETVYLRELLGSIGFGCRRSTTLFEDNKSAINLSKAFGAHCRTKHIGVRWHGIREWIREGILALKYVETGDQVADILTKGLS 1314
VAQGFSQ G+D+ ET +PVAR ++RTV +LAA+H +L MDV +LN +++E++++ P F ++ V R R+S+ GLKQS R WN+ LD L +G + D C+Y ++EGGE ++AVYVD++++AG+ + K++E K ++++F+MKD G LG++V + I I Q +Y + VL+R+G + + TPV K+ +AD +S+ + Y+ VG L+Y ST+TRPDIAYAV AR P +E + KRI RYL+ D G+ + G G+ DA+WA D +DRKST+GY F+++ AIS S+KQ V S+ EAEY+ A +E V+L++LL + + EDN++AI ++K H R KHI +++H IRE + + L+Y T + +ADI TKGLS
Sbjct: 198 VAQGFSQTFGDDYDETFSPVARFESVRTVIALAAQHGLKLHQMDVTTAFLNGDLKEEVYMKQPEGFIDKGKEH-LVCRLRRSICGLKQSPRCWNSVLDRKLKNMGFVQTTGDPCIYV-KEEGGEI-FIIAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQRHYFLGVKVIQKPDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTKLKK--AAD---DSQRVDQVNYQCAVGHLLYLSTKTRPDIAYAVSDVARFSAHPTEEHWIAVKRIMRYLNGTRDMGLLYDGSKTTTSCVGYSDADWAGDLDDRKSTSGYVFQISNAAISWRSKKQSCVALSTAEAEYMTLASATQEAVWLQQLLSDLKSKPTGPMLILEDNQAAICMAKNAQYHGRAKHIDIKYHFIREHVASAAVKLEYCSTEEMIADIFTKGLS 628
BLAST of mRNA_H-paniculata_contig47271.11750.1 vs. uniprot
Match: A0A6G0X2D0_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X2D0_9STRA) HSP 1 Score: 300 bits (768), Expect = 2.350e-94 Identity = 174/439 (39.64%), Postives = 262/439 (59.68%), Query Frame = 1
Query: 10 GFSQVEGEDFFETSAPVARMSTLRTVFSLAAEHDFELEGMDVDATYLNAPVEKELFVQLPPEF---SHFSRDIPFVRRPRKSLYGLKQSGRNWNNTLDDFLVGIGRECSFTDSCLYFFRDEGGETNLLVAVYVDNLVIAGRREKVDEF-KHNVSQRFRMKDSGSLSRVLGIEVRCDRPNGTITISQGSYIREVLKRYGFDECRGVPTPVEGKVKISAPDSADKPSESKSGTSIEYRGMVGSLMYASTRTRPDIAYAVHQAARCMEDPCQEDFSRCKRIFRYLSTVPDFGITFGGKSNGHGLEGFVDAEWAVDAEDRKSTTGYFFKLNGGAISLCSRKQ*LVTWSSTEAEYVAAGEAGKETVYLRELLGSIG-FGCRRSTTLFEDNKSAINLSKAFGAHCRTKHIGVRWHGIREWIREGILALKYVETGDQVADILTKGL 1311
G+SQ G D+ ET APVA+ +++R + S AA+++ +L+ MDV+ +LN+ +++++++Q+P + + + V + +KSL GLKQ+ R WN T+D F++ I S D C+Y R G +LV++YVD+L++A K+ + K +S+RF+M D G+LS LGIEV P+G++ I Q +++ VL ++ C+ V TP E ++S E I+YR VG LMY TRPDIA AV A++ +E+P Q +S KRIFRYL DFGI + G + + G+ DA+W DA R ST+GY F LN G +S SRKQ V SSTEAEY+ EA +E V+++ LL +G R ++EDN+ +I L+K H TKHI +R+H RE +++ +ALKY T + +ADI TK L
Sbjct: 2 GYSQEYGIDYEETFAPVAKFTSIRVLLSTAAKYNLDLQQMDVNTAFLNSDLDEDIYMQVPDDLDVKATQGQTSKLVLKLKKSLCGLKQAPRLWNETIDGFMLSIRIAKSNADHCIYVMRT--GSRVVLVSLYVDDLILASNCNKMMQATKEALSKRFKMTDLGALSYCLGIEVMRS-PSGSVFIHQSKFLKSVLVKFNMQGCKPVKTPQESGQRLSKYMCPTTDEEKTDMGRIQYRSAVGCLMYLMVTTRPDIAVAVGVASQFLENPGQRHWSAVKRIFRYLKGTEDFGIKYSGSQD---VCGYTDADWVGDANTRHSTSGYCFMLNNGLVSWKSRKQRTVALSSTEAEYMGLSEASQEAVWMKRLLLDLGEVDIRTPIVVWEDNQGSIALAKNPQHHNPTKHIDIRYHFAREKVQDQDIALKYCPTQNMIADIFTKAL 434
BLAST of mRNA_H-paniculata_contig47271.11750.1 vs. uniprot
Match: A0A7D9JFU5_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9JFU5_PARCT) HSP 1 Score: 302 bits (773), Expect = 6.440e-94 Identity = 174/449 (38.75%), Postives = 262/449 (58.35%), Query Frame = 1
Query: 1 VAQGFSQVEGEDFFETSAPVARMSTLRTVFSLAAEHDFELEGMDVDATYLNAPVEKELFVQLPPEFSHFSRDIP-FVRRPRKSLYGLKQSGRNWNNTLDDFLVGIGRECSFTDSCLY---FFRDEGGETNLLVAVYVDNLV-IAGRREKVDEFKHNVSQRFRMKDSGSLSRVLGIEVRCDRPNGTITISQGSYIREVLKRYGFDECRGVPTPVEGKVKISAPDSADKPSESKSGTSIE-YRGMVGSLMYASTRTRPDIAYAVHQAARCMEDPCQEDFSRCKRIFRYLSTVPDFGITF----GGKSNGHGLEGFVDAEWAVDAEDRKSTTGYFFKLNGGAISLCSRKQ*LVTWSSTEAEYVAAGEAGKETVYLRELLGSIGFGCRRSTTLFEDNKSAINLSKAFGAHCRTKHIGVRWHGIREWIREGILALKYVETGDQVADILTKGLSR 1317
VAQG+SQ G ++ E +PVAR S++RT+ +LA +H+ E+ MDV +LN +E ++++ P F ++ P +V + +KSLYGLKQS R WN TLD FL G S D+C+Y D G + +++AVYVD+++ I+ ++ K + + F M D G + +LG+ ++ DR T+ ISQ Y+ VL R+G C+ + TP+E + K +E + G Y+ +G L Y ST TRPDI+ AV + M +P +E ++ KR+ RY+ +FG+ F NG L G+ DA WA D + R+ST+GY FK+ +S CS+KQ VT S+TEAEYVA +A +E +++R LL IG TT++EDN+ AI +SK H RTKHI VR+H +RE + + + Y T +ADI+TKGL++
Sbjct: 82 VAQGYSQTPGINYEEVFSPVARHSSIRTLLALANKHNLEIHQMDVKTAFLNGYIEHDIYMSQPDGF--VDQEHPEYVCKLKKSLYGLKQSARCWNQTLDSFLTKNGYRKSNADNCIYVKSIKNDNGFISFVILAVYVDDIIPISNDINMLNTEKDLLCKHFEMTDQGEIHFILGMTIKRDRETKTLFISQQRYLESVLDRFGMANCKPISTPLE--------TTYHKRTEEEEGFDKNLYQQAIGRLTYISTATRPDISAAVSILSSYMSNPSKEHWNGVKRLLRYIKGTLNFGLKFTTSENDDENGDELYGYSDANWAGDVDSRRSTSGYVFKVANSTVSWCSKKQASVTKSTTEAEYVALSQATQEAIWMRRLLSDIGCKSEEPTTMYEDNQGAIEISKNARFHNRTKHIDVRFHFVREKVLSNEVKVIYCPTEHMLADIMTKGLTK 520
BLAST of mRNA_H-paniculata_contig47271.11750.1 vs. uniprot
Match: A0A7D9HZ03_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HZ03_PARCT) HSP 1 Score: 305 bits (782), Expect = 7.360e-94 Identity = 166/441 (37.64%), Postives = 272/441 (61.68%), Query Frame = 1
Query: 1 VAQGFSQVEGEDFFETSAPVARMSTLRTVFSLAAEHDFELEGMDVDATYLNAPVEKELFVQLPPEFSHFSRDIPFVRRPRKSLYGLKQSGRNWNNTLDDFLVGIGRECSFTDSCLYFFRDEGGETNLLVAVYVDNLVIAGRR-EKVDEFKHNVSQRFRMKDSGSLSRVLGIEVRCDRPNGTITISQGSYIREVLKRYGFDECRGVPTPVEGKVK-ISAPDSADKPSESKSGTSIEYRGMVGSLMYASTRTRPDIAYAVHQAARCMEDPCQEDFSRCKRIFRYLSTVPDFGITFGGKSNGHGLEGFVDAEWAVDAEDRKSTTGYFFKLNGGAISLCSRKQ*LVTWSSTEAEYVAAGEAGKETVYLRELLGSIGFGCRRSTTLFEDNKSAINLSKAFGAHCRTKHIGVRWHGIREWIREGILALKYVETGDQVADILTKGLSR 1317
VAQGFSQ G D+ ET +PV R ++RTV +L+ + +L MDV A +LN +E E++++ P F ++ + KSLYGLKQS R WN+ LD+ L IG + +D C+Y ++G +VA++VD++++AG+ EK+ + K ++++RF++KD G L +LG++V + + + I Q +Y ++K+YG + C+ V TPV+ K +SA + ++ ++ E++ VGSL+Y S+ TRPDI +AV+ A+ +P E ++ KRIFRYL ++G+ + +N + GF DA+WA D DRKST+GY F++NG A+S S+KQ V S+ AEYVA A +E +++R+LL + T++EDN+SAI +SK H R+KHI ++++ +R+ + + L + Y TG +AD+ TKG+ +
Sbjct: 214 VAQGFSQRFGVDYDETFSPVVRFESIRTVIALSVQRGLKLHQMDVTAAFLNGELEDEVYMKQPEGFEVKGKEH-LACKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDGNI--FVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVI--QEDAKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAMEDSELFNKE------EHQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLYSENANPDCV-GFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCVALSTAAAEYVALSAAAQEALWMRQLLTDLNVNIDEPMTIYEDNQSAIAMSKNPQFHGRSKHIDIKYYFVRDQVEKKTLTVLYCPTGSMLADLFTKGIPK 642
BLAST of mRNA_H-paniculata_contig47271.11750.1 vs. uniprot
Match: A0A2S2NPY8_SCHGA (Copia protein (Fragment) n=1 Tax=Schizaphis graminum TaxID=13262 RepID=A0A2S2NPY8_SCHGA) HSP 1 Score: 303 bits (775), Expect = 8.810e-94 Identity = 171/439 (38.95%), Postives = 260/439 (59.23%), Query Frame = 1
Query: 1 VAQGFSQVEGEDFFETSAPVARMSTLRTVFSLAAEHDFELEGMDVDATYLNAPVEKELFVQLPPEFSHFSRDIPFVRRPRKSLYGLKQSGRNWNNTLDDFLVGIGRECSFTDSCLYFFRDEGGETNLLVAVYVDNLVIA-GRREKVDEFKHNVSQRFRMKDSGSLSRVLGIEVRCDRPNGTITISQGSYIREVLKRYGFDECRGVPTPVEGKVKISAPDSADKPSESKSGTSIEYRGMVGSLMYASTRTRPDIAYAVHQAARCMEDPCQEDFSRCKRIFRYLSTVPDFGITFGGKS-NGHGLEGFVDAEWAVDAEDRKSTTGYFFKLNGGAISLCSRKQ*LVTWSSTEAEYVAAGEAGKETVYLRELLGSIGFGCRRSTTLFEDNKSAINLSKAFGAHCRTKHIGVRWHGIREWIREGILALKYVETGDQVADILTKGL 1311
VA+GFSQ EG D+ ET +PVA+++T R++ A + ++ L +DV +L+ V +E++++ P FS + V R K+LYGLKQ+ + WNN FL IG S TD CLY G E + + +YVD++++A G +++E K+ + + F ++D G LS LGI++ + + ISQG Y++ VL+R+ +C+ P+E KV +S + S+ YR ++G LMYA TRPD++Y ++ + +P + + K + RY+ D+ I + +S N LEGFVDA+WA + +DRKS TGY FK+ G +S + +Q + S+TEAEY+AA A E ++LR +L G TL+EDN+S I LS+ G H RTKHI +R H IRE + EGI+ LKY+ + +Q ADILTKGL
Sbjct: 131 VARGFSQQEGMDYTETYSPVAKLTTFRSLLVFAVQKNWYLYQLDVKTAFLHGVVNEEIYIEQP---CGFSENNNLVCRLHKALYGLKQASKCWNNRFHQFLTKIGFTRSNTDHCLYTLDFSGSEDLIHLLLYVDDIILASGSINRINELKYQLKEEFEIEDCGILSYYLGIKIEHNIDKAELKISQGQYLKNVLRRFNMLDCKPRSIPIETKVDLSINTLSTTCSQ-------PYRQLIGCLMYAMLATRPDLSYCLNYFSHFQSNPEEVHWMYLKNVLRYIKGTLDYSIIYRKQSGNIPILEGFVDADWA-NHKDRKSVTGYIFKIYGSIVSWSTNRQPTIALSTTEAEYMAASYATCEAIWLRSILKDFGVELFEPITLYEDNQSCIQLSQNPGHHRRTKHIDIRHHFIREKVEEGIVKLKYITSENQQADILTKGL 558
BLAST of mRNA_H-paniculata_contig47271.11750.1 vs. uniprot
Match: H3H4L3_PHYRM (Uncharacterized protein n=5 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H4L3_PHYRM) HSP 1 Score: 316 bits (809), Expect = 1.060e-93 Identity = 171/440 (38.86%), Postives = 269/440 (61.14%), Query Frame = 1
Query: 1 VAQGFSQVEGEDFFETSAPVARMSTLRTVFSLAAEHDFELEGMDVDATYLNAPVEKELFVQLPPEFSHFSRDIP-FVRRPRKSLYGLKQSGRNWNNTLDDFLVGIGRECSFTDSCLYFFRDEGGETNLLVAVYVDNLVIAGRREKV-DEFKHNVSQRFRMKDSGSLSRVLGIEVRCDRPNGTITISQGSYIREVLKRYGFDECRGVPTPVEGKVKISAPDSADKPSESKSGTSIEYRGMVGSLMYASTRTRPDIAYAVHQAARCMEDPCQEDFSRCKRIFRYLSTVPDFGITFGGKSNGHGLEGFVDAEWAVDAEDRKSTTGYFFKLNGGAISLCSRKQ*LVTWSSTEAEYVAAGEAGKETVYLRELLGSIG-FGCRRSTTLFEDNKSAINLSKAFGAHCRTKHIGVRWHGIREWIREGILALKYVETGDQVADILTKGL 1311
VA+GFSQ G D+ ET APVA+ +++R V SLAA++ +L MDV +LN +++++++ P + D P V + ++SLYGLKQS R WN T+DDF++ +G + +D C+Y RD G+ + VA+YVD+LV+A +++ + KH +S+RF M D G L LG+E++ D +G +T+ Q +++ +L ++G + + V TP + +K++ + ++ YR VG+LMY TRPD+A AV ++ DPC + KR+ RYL P G+ F + + G+ G+ DA+WA D E R+ST+GY F +NGG IS S+KQ V SSTEAEY+A EA +E V+L+ L +G + ++EDN+ +I L+K H RTKHI +R+H +RE + +G + L+YV T D +AD++TK +
Sbjct: 724 VAKGFSQKYGIDYDETFAPVAKFTSIRIVLSLAAKYGLKLHQMDVKTAFLNGVLDEDIYMAQPD--GYVDEDHPDHVCKLKRSLYGLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRD--GQDMIFVALYVDDLVLASSSDELLESTKHALSKRFEMTDLGELEYFLGMEIKNDHGSGKVTVRQTKFLKSILTKFGMQDSKPVKTPQDPGLKLTKNMCEGGCQHEDTMKNVPYRSAVGALMYLMVATRPDLAAAVGVLSQFSADPCPTHWQALKRVLRYLQATPTHGLEF-SREDSVGMCGYSDADWAGDIESRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEVVWLKVFLCELGEMASDEAVKIYEDNQGSIALAKNPQFHKRTKHIDIRYHFVREKVEDGQVVLQYVSTTDMLADMMTKAI 1158
BLAST of mRNA_H-paniculata_contig47271.11750.1 vs. uniprot
Match: J9KJ72_ACYPI (Integrase catalytic domain-containing protein n=1 Tax=Acyrthosiphon pisum TaxID=7029 RepID=J9KJ72_ACYPI) HSP 1 Score: 317 bits (811), Expect = 1.260e-93 Identity = 165/438 (37.67%), Postives = 270/438 (61.64%), Query Frame = 1
Query: 1 VAQGFSQVEGEDFFETSAPVARMSTLRTVFSLAAEHDFELEGMDVDATYLNAPVEKELFVQLPPEFSHFSRDIPFVRRPRKSLYGLKQSGRNWNNTLDDFLVGIGRECSFTDSCLYFFRDEGGETNLLVAVYVDNLVIAGRRE-KVDEFKHNVSQRFRMKDSGSLSRVLGIEVRCDRPNGTITISQGSYIREVLKRYGFDECRGVPTPVEGKVKISAPDSADKPSESKSGTSIEYRGMVGSLMYASTRTRPDIAYAVHQAARCMEDPCQEDFSRCKRIFRYLSTVPDFGITFGGKSNGHGLEGFVDAEWAVDAEDRKSTTGYFFKLNGGAISLCSRKQ*LVTWSSTEAEYVAAGEAGKETVYLRELLGSIGFGCRRSTTLFEDNKSAINLSKAFGAHCRTKHIGVRWHGIREWIREGILALKYVETGDQVADILTKGL 1311
VAQGFSQ EG D+++T +PVA+++TLRT+ ++A + ++ L+ +DV +L + ++++++ P E +++ D+ F + KSLYGLKQ+ + W+ D+++ +G E S +D CLY + + + +YVD+++IAG K+ E K + + F M+D+G L+ LG+++ D+ G + I+Q Y+ +VLK++ D C + TP+E K+ I ++K + YR +VGSLMYA +RPD++YA++ R P + ++ KR+ RY+ + G+ F +SN L GFVDA+WA DRKSTTGY FK+ +S +++Q V SSTEAEY+A A E +++R+LL + LFEDN+ AI+LS + H R+KHI + H +RE ++EG++ LKY+ T +Q+AD+LTKGL
Sbjct: 839 VAQGFSQKEGVDYYDTYSPVAKLTTLRTLLAIAVQRNWFLQQLDVKTAFLYGILTEDIYIEQP-EGLNYNSDMIF--KLNKSLYGLKQASKCWHERFDNYIAKLGLEQSDSDQCLYILNNNNTHDIIYLLLYVDDIIIAGSNMLKIGEIKSYLKEEFEMEDNGDLNYFLGLKINYDKTVGKLYINQTQYLEDVLKKFNMDNCNTISTPIESKLNIEE--------DNKQECNQPYRQLVGSLMYAMLGSRPDLSYALNFFCRYQSKPNECHWNHLKRVLRYVKGTLNNGLCFHRQSNSTELIGFVDADWASSTIDRKSTTGYLFKVFNCLVSWSTKRQPTVALSSTEAEYMAVSNATCEAIWIRKLLKDLDVTICGPVILFEDNQGAIHLSSSQELHKRSKHIDTKHHFVREKVKEGLIELKYIPTSNQLADLLTKGL 1265 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig47271.11750.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig47271.11750.1 >prot_H-paniculata_contig47271.11750.1 ID=prot_H-paniculata_contig47271.11750.1|Name=mRNA_H-paniculata_contig47271.11750.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=316bp MSTLRTVFSLAAEHDFELEGMDVDATYLNAPVEKELFVQLPPEFSHFSRDback to top mRNA from alignment at H-paniculata_contig47271:89..1465- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig47271.11750.1 ID=mRNA_H-paniculata_contig47271.11750.1|Name=mRNA_H-paniculata_contig47271.11750.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1377bp|location=Sequence derived from alignment at H-paniculata_contig47271:89..1465- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig47271:89..1465- >mRNA_H-paniculata_contig47271.11750.1 ID=mRNA_H-paniculata_contig47271.11750.1|Name=mRNA_H-paniculata_contig47271.11750.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1896bp|location=Sequence derived from alignment at H-paniculata_contig47271:89..1465- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |