prot_H-paniculata_contig47268.11749.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig47268.11749.1
Unique Nameprot_H-paniculata_contig47268.11749.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length72
Homology
BLAST of mRNA_H-paniculata_contig47268.11749.1 vs. uniprot
Match: D7FU41_ECTSI (Pre-mRNA-splicing factor SLU7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU41_ECTSI)

HSP 1 Score: 142 bits (357), Expect = 6.430e-38
Identity = 68/71 (95.77%), Postives = 69/71 (97.18%), Query Frame = 0
Query:    1 QGRVARQGGLGGAQMKTTVRNLRIREDRAKYLYNLDPNSAYYDPKTRAMRDNPLPEANAEDLVFAGDNFIR 71
            QGRVARQGGLGGAQMKTTVRNLRIREDRAKYLYNLDPNSAYYDPKTRAMRDNP+PE  AEDLVFAGDNFIR
Sbjct:  299 QGRVARQGGLGGAQMKTTVRNLRIREDRAKYLYNLDPNSAYYDPKTRAMRDNPMPETAAEDLVFAGDNFIR 369          
BLAST of mRNA_H-paniculata_contig47268.11749.1 vs. uniprot
Match: A0A836CLD5_9STRA (Pre-mRNA-splicing factor SLU7 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLD5_9STRA)

HSP 1 Score: 129 bits (325), Expect = 1.640e-33
Identity = 61/71 (85.92%), Postives = 66/71 (92.96%), Query Frame = 0
Query:    1 QGRVARQGGLGGAQMKTTVRNLRIREDRAKYLYNLDPNSAYYDPKTRAMRDNPLPEANAEDLVFAGDNFIR 71
            QGRVARQGGLGGAQM TTVRNLRIREDRAKYLYNLDP+SAYYDPKTRAMR+NP P AN E+L +AGDNF+R
Sbjct:  262 QGRVARQGGLGGAQMATTVRNLRIREDRAKYLYNLDPDSAYYDPKTRAMRENPNPSANPEELAYAGDNFMR 332          
BLAST of mRNA_H-paniculata_contig47268.11749.1 vs. uniprot
Match: A0A6G0RVC6_9STRA (Pre-mRNA-splicing factor SLU7 n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0RVC6_9STRA)

HSP 1 Score: 116 bits (291), Expect = 1.200e-32
Identity = 55/69 (79.71%), Postives = 59/69 (85.51%), Query Frame = 0
Query:    3 RVARQGGLGGAQMKTTVRNLRIREDRAKYLYNLDPNSAYYDPKTRAMRDNPLPEANAEDLVFAGDNFIR 71
            RVARQGG+GGAQMKTTVRNLRIRED AKYL NL+PNSAYYDPKTR+MRDNP PE N ED  + GDN  R
Sbjct:    5 RVARQGGVGGAQMKTTVRNLRIREDTAKYLRNLNPNSAYYDPKTRSMRDNPNPELNPEDTTYVGDNIAR 73          
BLAST of mRNA_H-paniculata_contig47268.11749.1 vs. uniprot
Match: A0A7S2MS38_9STRA (Pre-mRNA-splicing factor SLU7 (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MS38_9STRA)

HSP 1 Score: 122 bits (305), Expect = 4.240e-32
Identity = 57/71 (80.28%), Postives = 63/71 (88.73%), Query Frame = 0
Query:    1 QGRVARQGGLGGAQMKTTVRNLRIREDRAKYLYNLDPNSAYYDPKTRAMRDNPLPEANAEDLVFAGDNFIR 71
            Q R+ARQGG+GGAQMKTTVRNLRIRED AKYL NLDPNSAYYDPKTR+MRDNPLP  N E++ +AGDNF R
Sbjct:  164 QKRIARQGGIGGAQMKTTVRNLRIREDTAKYLRNLDPNSAYYDPKTRSMRDNPLPNENPEEVQYAGDNFSR 234          
BLAST of mRNA_H-paniculata_contig47268.11749.1 vs. uniprot
Match: A0A6A3U154_9STRA (Pre-mRNA-splicing factor SLU7 n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3U154_9STRA)

HSP 1 Score: 115 bits (288), Expect = 1.430e-31
Identity = 54/69 (78.26%), Postives = 59/69 (85.51%), Query Frame = 0
Query:    3 RVARQGGLGGAQMKTTVRNLRIREDRAKYLYNLDPNSAYYDPKTRAMRDNPLPEANAEDLVFAGDNFIR 71
            RVARQGG+GGAQMKTTVRNLRIR+D AKYL NL+PNSAYYDPKTR+MRDNP PE N ED  + GDN  R
Sbjct:    5 RVARQGGVGGAQMKTTVRNLRIRDDTAKYLRNLNPNSAYYDPKTRSMRDNPNPELNPEDTTYVGDNIAR 73          
BLAST of mRNA_H-paniculata_contig47268.11749.1 vs. uniprot
Match: A0A7S1UIW3_9STRA (Pre-mRNA-splicing factor SLU7 n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UIW3_9STRA)

HSP 1 Score: 122 bits (305), Expect = 2.140e-31
Identity = 57/71 (80.28%), Postives = 63/71 (88.73%), Query Frame = 0
Query:    1 QGRVARQGGLGGAQMKTTVRNLRIREDRAKYLYNLDPNSAYYDPKTRAMRDNPLPEANAEDLVFAGDNFIR 71
            QGRVARQGG+GGAQM TTVRNLR+RED AKYL NLDPNSAYYDPK+RAMRDNPLP  +   LV+AGDNF+R
Sbjct:   72 QGRVARQGGVGGAQMFTTVRNLRVREDTAKYLLNLDPNSAYYDPKSRAMRDNPLPHMDPNKLVYAGDNFVR 142          
BLAST of mRNA_H-paniculata_contig47268.11749.1 vs. uniprot
Match: W7TVH6_9STRA (Pre-mRNA-splicing factor SLU7 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVH6_9STRA)

HSP 1 Score: 123 bits (308), Expect = 3.250e-31
Identity = 57/71 (80.28%), Postives = 64/71 (90.14%), Query Frame = 0
Query:    1 QGRVARQGGLGGAQMKTTVRNLRIREDRAKYLYNLDPNSAYYDPKTRAMRDNPLPEANAEDLVFAGDNFIR 71
            QGRVARQGG+GGAQMK +VRNLRIRED AKYL NLDPNSAYYDPKTRAMRDNPLP  + E+L +AGDN++R
Sbjct:  242 QGRVARQGGVGGAQMKVSVRNLRIREDTAKYLRNLDPNSAYYDPKTRAMRDNPLPGTHPEELAYAGDNYVR 312          
BLAST of mRNA_H-paniculata_contig47268.11749.1 vs. uniprot
Match: A0A7S2V1R9_9STRA (Pre-mRNA-splicing factor SLU7 (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1R9_9STRA)

HSP 1 Score: 119 bits (299), Expect = 4.320e-31
Identity = 56/71 (78.87%), Postives = 64/71 (90.14%), Query Frame = 0
Query:    1 QGRVARQGGLGGAQMKTTVRNLRIREDRAKYLYNLDPNSAYYDPKTRAMRDNPLPEANAEDLVFAGDNFIR 71
            QGRVARQGGLGGAQMKTTVRNLRIRED AKYL NLDPNSA+YDPKTR+MR NP P  +AE+ ++AGDN++R
Sbjct:  255 QGRVARQGGLGGAQMKTTVRNLRIREDTAKYLRNLDPNSAFYDPKTRSMRANPTPHLDAENTLYAGDNWVR 325          
BLAST of mRNA_H-paniculata_contig47268.11749.1 vs. uniprot
Match: A0A7S2SN22_9STRA (Pre-mRNA-splicing factor SLU7 n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SN22_9STRA)

HSP 1 Score: 122 bits (307), Expect = 5.990e-31
Identity = 58/71 (81.69%), Postives = 63/71 (88.73%), Query Frame = 0
Query:    1 QGRVARQGGLGGAQMKTTVRNLRIREDRAKYLYNLDPNSAYYDPKTRAMRDNPLPEANAEDLVFAGDNFIR 71
            Q R+ARQGG+GGAQMKTTVRNLRIRED AKYL NLDPNSAYYDPKTR+MRDNPLP  N ED+ FAGDN+ R
Sbjct:  312 QKRIARQGGVGGAQMKTTVRNLRIREDTAKYLRNLDPNSAYYDPKTRSMRDNPLPAENPEDIPFAGDNYQR 382          
BLAST of mRNA_H-paniculata_contig47268.11749.1 vs. uniprot
Match: A0A7R9U7Z6_9STRA (Pre-mRNA-splicing factor SLU7 (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7Z6_9STRA)

HSP 1 Score: 120 bits (301), Expect = 1.630e-30
Identity = 56/71 (78.87%), Postives = 63/71 (88.73%), Query Frame = 0
Query:    1 QGRVARQGGLGGAQMKTTVRNLRIREDRAKYLYNLDPNSAYYDPKTRAMRDNPLPEANAEDLVFAGDNFIR 71
            QGRVARQGGLGGAQM TTVRNLR+RED+AKYL NLDPNSAYYDPK+R+MR+NPLP  +    V+AGDNFIR
Sbjct:  260 QGRVARQGGLGGAQMATTVRNLRLREDKAKYLLNLDPNSAYYDPKSRSMRENPLPHLDPAQAVYAGDNFIR 330          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig47268.11749.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FU41_ECTSI6.430e-3895.77Pre-mRNA-splicing factor SLU7 n=2 Tax=Ectocarpus T... [more]
A0A836CLD5_9STRA1.640e-3385.92Pre-mRNA-splicing factor SLU7 n=1 Tax=Tribonema mi... [more]
A0A6G0RVC6_9STRA1.200e-3279.71Pre-mRNA-splicing factor SLU7 n=2 Tax=Phytophthora... [more]
A0A7S2MS38_9STRA4.240e-3280.28Pre-mRNA-splicing factor SLU7 (Fragment) n=1 Tax=D... [more]
A0A6A3U154_9STRA1.430e-3178.26Pre-mRNA-splicing factor SLU7 n=3 Tax=Phytophthora... [more]
A0A7S1UIW3_9STRA2.140e-3180.28Pre-mRNA-splicing factor SLU7 n=1 Tax=Phaeomonas p... [more]
W7TVH6_9STRA3.250e-3180.28Pre-mRNA-splicing factor SLU7 n=2 Tax=Monodopsidac... [more]
A0A7S2V1R9_9STRA4.320e-3178.87Pre-mRNA-splicing factor SLU7 (Fragment) n=1 Tax=F... [more]
A0A7S2SN22_9STRA5.990e-3181.69Pre-mRNA-splicing factor SLU7 n=2 Tax=Rhizochromul... [more]
A0A7R9U7Z6_9STRA1.630e-3078.87Pre-mRNA-splicing factor SLU7 (Fragment) n=1 Tax=P... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021715Pre-mRNA-splicing factor SLU7 domainPFAMPF11708Slu7coord: 13..71
e-value: 1.0E-27
score: 97.6
IPR039974Pre-mRNA-splicing factor SLU7PANTHERPTHR12942STEP II SPLICING FACTOR SLU7coord: 13..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig47268contigH-paniculata_contig47268:546..761 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig47268.11749.1mRNA_H-paniculata_contig47268.11749.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig47268 546..761 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig47268.11749.1 ID=prot_H-paniculata_contig47268.11749.1|Name=mRNA_H-paniculata_contig47268.11749.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=72bp
QGRVARQGGLGGAQMKTTVRNLRIREDRAKYLYNLDPNSAYYDPKTRAMR
DNPLPEANAEDLVFAGDNFIR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021715Slu7_dom
IPR039974Splicing_factor_SLU7