prot_H-paniculata_contig1183.1174.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1183.1174.1
Unique Nameprot_H-paniculata_contig1183.1174.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length44
Homology
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BLAST of mRNA_H-paniculata_contig1183.1174.1 vs. uniprot
Match: A0A6H5KVH9_9PHAE (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KVH9_9PHAE)

HSP 1 Score: 53.1 bits (126), Expect = 4.880e-7
Identity = 22/38 (57.89%), Postives = 30/38 (78.95%), Query Frame = 0 
Query:    6 TGDVKYWDSSYGKALDDLEGHVMGAEGGVGDSREDSLA 43
            +GDVKYWD+SYGK LD L+G +   E G GD+RED+++
Sbjct:    3 SGDVKYWDTSYGKTLDQLDGFIATMESGSGDAREDAMS 40
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1183.1174.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KVH9_9PHAE4.880e-757.89t-SNARE coiled-coil homology domain-containing pro... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1183contigH-paniculata_contig1183:27165..27822 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1183.1174.1mRNA_H-paniculata_contig1183.1174.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1183 27055..27822 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1183.1174.1 ID=prot_H-paniculata_contig1183.1174.1|Name=mRNA_H-paniculata_contig1183.1174.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=44bp
MASGNTGDVKYWDSSYGKALDDLEGHVMGAEGGVGDSREDSLAS
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