prot_H-paniculata_contig4723.11743.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4723.11743.1
Unique Nameprot_H-paniculata_contig4723.11743.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length153
Homology
BLAST of mRNA_H-paniculata_contig4723.11743.1 vs. uniprot
Match: A0A2P4XNC1_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XNC1_9STRA)

HSP 1 Score: 102 bits (255), Expect = 9.620e-23
Identity = 54/144 (37.50%), Postives = 85/144 (59.03%), Query Frame = 0
Query:    9 IIIYVDDLLLISTKGSKIMDELPTDLRSDHKLKDLGDPRYHLGWHIIRDRQKRKLKIDQHLYARSMAERFGITKTSMLPATAGNNTMIK-NDGPKTSEEAEEMPAFPYREAVGALMWPATMTRPEIAYAVRTTGKFCENPGVEH 151
            I +YVDDLL+I+   + ++ EL + L+    + DLG+ +Y LGW I RDR+ R + + QH YA  + +RF       +   A  N  +  +  P T  E + M ++PYREAVG++M+    TRP++A+ +R   +F  NPG+EH
Sbjct:  295 IAVYVDDLLIIAPTRA-LVSELKSALKKRFSMTDLGEVKYLLGWSIQRDRKNRTIFVHQHKYATKVIDRFSDYIPYPIATPADRNVKLSVSSQPATEAEKDAMKSYPYREAVGSIMYLMVGTRPDMAFYMREVSQFLANPGMEH 437          
BLAST of mRNA_H-paniculata_contig4723.11743.1 vs. uniprot
Match: H3H7M7_PHYRM (CCHC-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H7M7_PHYRM)

HSP 1 Score: 103 bits (256), Expect = 1.200e-22
Identity = 56/145 (38.62%), Postives = 88/145 (60.69%), Query Frame = 0
Query:    7 AVIIIYVDDLLLISTKGSKIMDELPTDLRSDHKLKDLGDPRYHLGWHIIRDRQKRKLKIDQHLYARSMAERFGITKTSMLPATAGNNTMIKNDGPKTSEEAEEMPAFPYREAVGALMWPATMTRPEIAYAVRTTGKFCENPGVEH 151
            ++II+YVDDL++ S   ++I  E+   L+ +  +K+LG+ +Y LG  I R+R  + + ++Q  Y + +AE FG+ K   +   A +N+ +     K SE+ + +P +PYRE VGALM+ AT TRP+IA AV    KFCE     H
Sbjct:  856 SIIIVYVDDLMIFSRTKAEI-GEIKKALKREFSIKELGELKYCLGIEIHRNRDDKTIVMNQRAYIQRLAEEFGVEKCKAVHTPADSNSKLV----KPSEDEDFVPRYPYRELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSH 995          
BLAST of mRNA_H-paniculata_contig4723.11743.1 vs. uniprot
Match: H3H9V9_PHYRM (CCHC-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H9V9_PHYRM)

HSP 1 Score: 102 bits (254), Expect = 2.090e-22
Identity = 55/139 (39.57%), Postives = 88/139 (63.31%), Query Frame = 0
Query:    7 AVIIIYVDDLLLISTKGSKIMDELPTDLRSDHKLKDLGDPRYHLGWHIIRDRQKRKLKIDQHLYARSMAERFGITKTSMLPATAGNNTMIKNDGPKTSEEAEEMPAFPYREAVGALMWPATMTRPEIAYAVRTTGKFCE 145
            ++II+YVDDL++ S   ++I  E+   L+ +  +K+LG+ +Y LG  I R+R  + + ++Q  Y + +AE+FG+ K   +   A +N+ +     K SE+ + +P +PYRE VGALM+ AT TRP+IA AV    KFCE
Sbjct:  507 SIIIVYVDDLMIFSRTKAEI-GEIKKALKREFSIKELGELKYCLGIEIHRNRDDKTIVMNQRAYIQRLAEKFGVEKCKAVHTPADSNSKLV----KPSEDEDFVPRYPYRELVGALMYLATCTRPDIAQAVGEVAKFCE 640          
BLAST of mRNA_H-paniculata_contig4723.11743.1 vs. uniprot
Match: H3GB17_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB17_PHYRM)

HSP 1 Score: 101 bits (251), Expect = 2.130e-22
Identity = 55/145 (37.93%), Postives = 88/145 (60.69%), Query Frame = 0
Query:    7 AVIIIYVDDLLLISTKGSKIMDELPTDLRSDHKLKDLGDPRYHLGWHIIRDRQKRKLKIDQHLYARSMAERFGITKTSMLPATAGNNTMIKNDGPKTSEEAEEMPAFPYREAVGALMWPATMTRPEIAYAVRTTGKFCENPGVEH 151
            ++II+YVDDL++ S   ++I  E+   L+ +  +K+LG+ +Y LG  I R+R  + + ++Q  Y + +AE+FG+ K   +   A +N+ +     K +E+   +P +PYRE VGALM+ AT TRP+IA AV    KFCE     H
Sbjct:   87 SIIIVYVDDLMIFSRTKAEI-GEIKKALKREFSIKELGELKYCLGIEIHRNRDDKTIVMNQRAYIQRLAEKFGVEKCKAVHTPADSNSKLV----KPAEDEVFVPRYPYRELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSH 226          
BLAST of mRNA_H-paniculata_contig4723.11743.1 vs. uniprot
Match: F8PHD8_SERL3 (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Serpula lacrymans var. lacrymans (strain S7.3) TaxID=936435 RepID=F8PHD8_SERL3)

HSP 1 Score: 97.4 bits (241), Expect = 6.490e-22
Identity = 59/143 (41.26%), Postives = 77/143 (53.85%), Query Frame = 0
Query:   11 IYVDDLLLISTKGSKIMDELPTDLRSDHKLKDLGDPRYHLGWHIIRDRQKRKLKIDQHLYARSMAERFGIT--KTSMLPATAGNNTMIKNDGPKTSEEAEEMPAFPYREAVGALMWPATMTRPEIAYAVRTTGKFCENPGVEH 151
            ++VDD+ L ST  S + D+   DL    KL+DLG   Y LG  I RD   R + + QH Y   + ERFG+   K    P   G   + K+  PKTS +A  M   PY  AVGALM+ AT T P+IAY V    ++  NPG+ H
Sbjct:   74 VFVDDMTLASTSTSAL-DQAVKDLSLHFKLRDLGPTSYLLGISITRDLSNRTISLSQHQYTLDILERFGMKDCKPVSTPMDPGLR-LTKDMSPKTSSDAALMKDIPYLAAVGALMYLATTTHPDIAYTVGVLARYNSNPGLTH 214          
BLAST of mRNA_H-paniculata_contig4723.11743.1 vs. uniprot
Match: H3G9E3_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=4 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G9E3_PHYRM)

HSP 1 Score: 99.8 bits (247), Expect = 1.350e-21
Identity = 54/145 (37.24%), Postives = 87/145 (60.00%), Query Frame = 0
Query:    7 AVIIIYVDDLLLISTKGSKIMDELPTDLRSDHKLKDLGDPRYHLGWHIIRDRQKRKLKIDQHLYARSMAERFGITKTSMLPATAGNNTMIKNDGPKTSEEAEEMPAFPYREAVGALMWPATMTRPEIAYAVRTTGKFCENPGVEH 151
            ++++IYVDDL+L S K  + ++ +   L+ +  +K+LG+ +Y LG  I R+R+ + + ++Q  Y + +AE+FG+ K   +   A  N+ +     K +EE   +  +PYRE VGALM+ AT TRP+IA AV    KFCE     H
Sbjct:  173 SIVVIYVDDLMLFS-KTKEHIESIKVALKKEFSIKELGELKYCLGIEIDRNREDKTILMNQRAYIKRLAEKFGVDKCKAVHTPADCNSKLV----KMTEEEAFVAKYPYRELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSH 312          
BLAST of mRNA_H-paniculata_contig4723.11743.1 vs. uniprot
Match: Q45W66_PHACR (Polyprotein n=1 Tax=Phanerochaete chrysosporium (strain RP-78 / ATCC MYA-4764 / FGSC 9002) TaxID=273507 RepID=Q45W66_PHACR)

HSP 1 Score: 99.8 bits (247), Expect = 1.980e-21
Identity = 56/141 (39.72%), Postives = 84/141 (59.57%), Query Frame = 0
Query:   11 IYVDDLLLISTKGSKIMDELPTDLRSDHKLKDLGDPRYHLGWHIIRDRQKRKLKIDQHLYARSMAERFGITKTSMLPATAGNNTMIKNDGPKTSEEAEEMPAFPYREAVGALMWPATMTRPEIAYAVRTTGKFCENPGVEH 151
            ++VDD  L + K  +IMD+L  +L S  ++ DLG  R  LG+ +IR+R +R L + Q  Y R + +RF +  ++ +      NT ++    KT +     P FPYREAVG+LM+ A  TRP+I+YAV+T  +FCE P   H
Sbjct: 1066 VHVDDFSLFA-KTREIMDKLKGELSSRFEMTDLGPVRQILGYEVIRERDQRTLMLRQAAYIRKVLDRFNMADSNPVSVPMDPNTRLQ----KTPDAPP--PDFPYREAVGSLMYAAVGTRPDISYAVQTLSQFCERPSTAH 1199          
BLAST of mRNA_H-paniculata_contig4723.11743.1 vs. uniprot
Match: A0A2P4XRY4_9STRA (Integrase catalytic core protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XRY4_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 6.620e-21
Identity = 57/145 (39.31%), Postives = 86/145 (59.31%), Query Frame = 0
Query:    7 AVIIIYVDDLLLISTKGSKIMDELPTDLRSDHKLKDLGDPRYHLGWHIIRDRQKRKLKIDQHLYARSMAERFGITKTSMLPATAGNNTMIKNDGPKTSEEAEEMPAFPYREAVGALMWPATMTRPEIAYAVRTTGKFCENPGVEH 151
            +++I+YVDDL++ S     I  E+   LRS+  +K+LGD +Y LG  I R R+K  + ++Q  Y + +AE+ G+ K   +   A ++  +     K+SE+   +  +PYRE VGALM+ AT TRP+IAYAV    KFCE     H
Sbjct:  650 SIVIVYVDDLMIFSRTKDDIA-EIKEALRSEFSIKELGDLKYCLGIEIHRKREK-MIVMNQRAYIKRLAEKSGVDKCKDIYTPADSSAKLM----KSSEDEYFVAKYPYRELVGALMYLATSTRPDIAYAVGEVAKFCERYNKSH 788          
BLAST of mRNA_H-paniculata_contig4723.11743.1 vs. uniprot
Match: A0A8H7F7C8_AGABI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Agaricus bisporus var. burnettii TaxID=192524 RepID=A0A8H7F7C8_AGABI)

HSP 1 Score: 95.1 bits (235), Expect = 1.580e-20
Identity = 54/149 (36.24%), Postives = 80/149 (53.69%), Query Frame = 0
Query:    3 GEMVAVIIIYVDDLLLISTKGSKIMDELPTDLRSDHKLKDLGDPRYHLGWHIIRDRQKRKLKIDQHLYARSMAERFGITKTSMLPATAGNNTMIKNDGPKTSEEAEEMPAFPYREAVGALMWPATMTRPEIAYAVRTTGKFCENPGVEH 151
            G++  ++ I++DD+ L+S K    M    T+L    KL+DLG     LG  + +DR  R + + Q  Y + + ERF +   + L       + + +  P   E+AE M + PY  AVGAL + ATMTRP+IAYAV   G+F  NP   H
Sbjct:  157 GDIKVIVPIFIDDITLVS-KSDAAMTSAVTELSKHFKLRDLGSTTLLLGIQVKQDRSHRTISLSQEHYIKELLERFNMDDANPLSTPLAPGSELSDIVPSLEEQAE-MKSVPYLNAVGALQYLATMTRPDIAYAVSYLGRFNSNPAPAH 303          
BLAST of mRNA_H-paniculata_contig4723.11743.1 vs. uniprot
Match: A0A401H1G1_9APHY (Integrase catalytic domain-containing protein n=7 Tax=Sparassis crispa TaxID=139825 RepID=A0A401H1G1_9APHY)

HSP 1 Score: 97.1 bits (240), Expect = 1.730e-20
Identity = 57/143 (39.86%), Postives = 81/143 (56.64%), Query Frame = 0
Query:   11 IYVDDLLLISTKGSKIMDELPTDLRSDHKLKDLGDPRYHLGWHIIRDRQKRKLKIDQHLYARSMAERFGIT--KTSMLPATAGNNTMIKNDGPKTSEEAEEMPAFPYREAVGALMWPATMTRPEIAYAVRTTGKFCENPGVEH 151
            +++DD+ L S K  K +D+   +L+S  KL+DLG  ++ LG  I RDR K  + + Q  Y   M ER+G++  K+   P   G   + K   P+T EEAE M   PY  AVGALM+ A  TRP+I +A+    +F  NPG  H
Sbjct: 1078 VFIDDMTLAS-KSKKALDDTVKELKSYFKLRDLGSTQFLLGIDIKRDRAKHTISLSQRQYIVDMLERYGLSDCKSVSTPMNPGAE-LSKALAPQTQEEAEYMHKVPYLSAVGALMYLAITTRPDIMFAIGCLARFNANPGPAH 1218          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4723.11743.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2P4XNC1_9STRA9.620e-2337.50Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3H7M7_PHYRM1.200e-2238.62CCHC-type domain-containing protein n=1 Tax=Phytop... [more]
H3H9V9_PHYRM2.090e-2239.57CCHC-type domain-containing protein n=1 Tax=Phytop... [more]
H3GB17_PHYRM2.130e-2237.93Reverse transcriptase Ty1/copia-type domain-contai... [more]
F8PHD8_SERL36.490e-2241.26Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3G9E3_PHYRM1.350e-2137.24Reverse transcriptase Ty1/copia-type domain-contai... [more]
Q45W66_PHACR1.980e-2139.72Polyprotein n=1 Tax=Phanerochaete chrysosporium (s... [more]
A0A2P4XRY4_9STRA6.620e-2139.31Integrase catalytic core protein n=1 Tax=Phytophth... [more]
A0A8H7F7C8_AGABI1.580e-2036.24Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A401H1G1_9APHY1.730e-2039.86Integrase catalytic domain-containing protein n=7 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 7..84
e-value: 7.9E-10
score: 38.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4723contigH-paniculata_contig4723:74..532 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4723.11743.1mRNA_H-paniculata_contig4723.11743.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4723 17..804 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4723.11743.1 ID=prot_H-paniculata_contig4723.11743.1|Name=mRNA_H-paniculata_contig4723.11743.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=153bp
MGGEMVAVIIIYVDDLLLISTKGSKIMDELPTDLRSDHKLKDLGDPRYHL
GWHIIRDRQKRKLKIDQHLYARSMAERFGITKTSMLPATAGNNTMIKNDG
PKTSEEAEEMPAFPYREAVGALMWPATMTRPEIAYAVRTTGKFCENPGVE
HK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2