mRNA_H-paniculata_contig47207.11741.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig47207.11741.1
Unique NamemRNA_H-paniculata_contig47207.11741.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig47207.11741.1 vs. uniprot
Match: A0A284QR55_ARMOS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Armillaria ostoyae TaxID=47428 RepID=A0A284QR55_ARMOS)

HSP 1 Score: 186 bits (472), Expect = 2.660e-50
Identity = 124/382 (32.46%), Postives = 189/382 (49.48%), Query Frame = 1
Query:    1 RPVAQGFSQVEGEDFFETSAPVAHMSTLRTIFSLAAEHDFELEGVDVDAAYLNAPVEEELFVKLPPEVSTFSRDIPFVRRLRKSLYGLKQSGRNWNNTVDDFLVGIGLDRSTTDSCFYFSRDDGGETNLLVAVYVDDL-------------------------------VIAGRLRRDRPNGTRTISEGSYIREVLERYDFDECRGVSTPAEGKVKISAPDRGRS-----GNSSEYRGMVGSLMYASTGARPDTSYVVRHAARRMEDPCREDFSTCKRIFVISVLCLSSALRSAVRVMVTVWKDSLMPIG-------RKMSRNESPQQDTLNGGAISLCSRKQQVATWSSTEAEYIAAEEAGKEAVYLRELLGSIGFDAGGA 1017
            R VA+GFSQ+ G DFFET APV  + T R + ++A + +  + G+DV  AYLN  ++E +++  PPE S  S        L+  LYGLKQSGR WN  ++   +G+G  R  +D C Y  + D G   ++VAV+VDD+                               ++  ++ R+   GT T+S+ +YI +VLER   ++C+ V  P +  V++     G S          Y   VGSLMYA+ G+RPD ++ V   ++ +++P  E  +  KR+F      L   L S +    T+  D L+P         R   R+ S    T  GGA++  S+KQ     S+ EAEY+A     +E ++LR LL  +G    GA
Sbjct:   48 RLVAKGFSQIPGTDFFETYAPVVRLDTFRLLMAIAVQRNLIIHGMDVVGAYLNGKLDESIYMAQPPEYSDGSGK---AAHLKLMLYGLKQSGRVWNEKLNATFLGLGYTRLMSDQCVYIRQMDSGP--IIVAVHVDDMTLLAPDDETMSNMKEELKKKLNVMDMGEIQYILGMKIDRNWDKGTITLSQKAYILKVLERMGMNDCKPVKMPMDPNVRLEKIPAGDSRGVNTATRQYYHTGVGSLMYAANGSRPDIAHAVTELSKYVQNPAAEHVTALKRVFRY----LKGTLDSGITYGRTM--DELIPYSDSDWGEDRADRRSTSGYVCTYAGGAVTWSSKKQPTVALSTMEAEYMALAHTTREVIWLRALLTELGLPPDGA 418          
BLAST of mRNA_H-paniculata_contig47207.11741.1 vs. uniprot
Match: A0A2G8RWY5_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8RWY5_9APHY)

HSP 1 Score: 190 bits (482), Expect = 2.460e-49
Identity = 137/376 (36.44%), Postives = 191/376 (50.80%), Query Frame = 1
Query:    1 RPVAQGFSQVEGEDFF--ETSAPVAHMSTLRTIFSLAAEHDFELEGVDVDAAYLNAPVEEELFVKLPPEVSTFSRDIPFVRRLRKSLYGLKQSGRNWNNTVDDFLVGIGLDRSTTDSCFYFSRDDGGETNLLVAVYVDDLVIAG------------------------------RLRRDRPNGTRTISEGSYIREVLERYDFDECRGVSTPAEGKVKI------SAPDRGRSGNSSEYRGMVGSLMYASTGARPDTSYVVRHAARRMEDPCREDFSTCKRIFVISVLCLSSALRSAVRVMVTV------WKDSLMPIGRKMSRNESPQQDTLNGGAISLCSRKQQVATWSSTEAEYIAAEEAGKEAVYLRELLGSI 996
            R VAQGFSQV G D+   ET APV+ + ++RTI SLAA HD+EL  +DV +AYLN  +EE ++++LPP  +   +    V RL+K+LYGLKQ+GR W  T+   +  +G  R   D   ++ R+  GE+ ++VA  VDDL I G                               +RRDR   T  IS+ SYI  ++ R++ DE   +S P +    +      S P +        YR  VGSLMYA+ G RPD ++ V   ++ M++P R  +   KR     VL      R    V  T       + D+      +   + S    TL+GGAIS  S+KQ V   SSTEAEYIA   A KEA++LR +L  I
Sbjct: 1094 RLVAQGFSQVPGRDYHDDETFAPVSRLPSIRTILSLAARHDWELRQMDVKSAYLNGILEETVYMRLPPGFAPPEQS-HLVCRLKKTLYGLKQAGRGWYKTLTAAMENMGFTRCVADHAVFYKRE--GESAIIVAASVDDLTITGTSDLVDAFAVDIKQRFEMSDLGDLHWILGIEVRRDRQARTIAISQRSYIDTIVSRFNLDEAAPLSIPLQPGSPLGNHQSPSTPRQFEDMRDVPYREAVGSLMYAAMGTRPDITFAVTALSQFMQNPGRAHWDALKR-----VLRYLKGSRELWLVYGTNNEGLRGYSDADWGSSTEHRHSISGYVFTLDGGAISWSSKKQNVVALSSTEAEYIALTHATKEAIWLRYVLSDI 1461          
BLAST of mRNA_H-paniculata_contig47207.11741.1 vs. uniprot
Match: A0A401GQU1_9APHY (Uncharacterized protein n=3 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GQU1_9APHY)

HSP 1 Score: 188 bits (478), Expect = 8.190e-49
Identity = 137/401 (34.16%), Postives = 209/401 (52.12%), Query Frame = 1
Query:    1 RPVAQGFSQVEGEDFFETSAPVAHMSTLRTIFSLAAEHDFELEGVDVDAAYLNAPVEEELFVKLPPEVSTFSRDIPFVRRLRKSLYGLKQSGRNWNNTVDDFLVGIGLDRSTTDSCFYFSRDDGGETNLLVAVYVDDLVIAG------------------------------RLRRDRPNGTRTISEGSYIREVLERYDFDECRGVSTPAEGKVKIS------APDRGRSGNSSEYRGMVGSLMYASTGARPDTSYVVRHAARRMEDPCREDFSTCKRIFVISVLCLSSALRSAV-RVMVTVWKDSLMPIGRKMSRNE-SPQQDTLNGGAISLCSRKQQVATWSSTEAEYIAAEEAGKEAVYLRELLGSIGFDAGGARHCLR--TINQPLISV-RDLAHTA 1080
            R VAQGFSQ+ G DF +T APVA ++++R I +LAA HD+++  +DV  AYLNA +EEE+F+K PP  +   ++  +V  LR ++YGLKQSGR W   +   L  +GL RS  D C ++  +D     L++A+ VDD  IAG                               +RRDR   T ++S+ +YI  ++ R++ ++ + +STP E    +S       P       +  YR  +GSLMYA+ G RPD ++ V   ++ M++P R  +   KR+           L   + R  V  + D+    G    R+        ++GGA+S  ++KQ V   SSTEAEYIA   A KEA+++R LL  I  D   ++  LR  T N+  I++ +D A+ A
Sbjct: 1026 RLVAQGFSQIPGIDFNDTFAPVAKLASIRIILALAARHDWDVHQMDVKGAYLNADLEEEIFMKQPPGQAKRGKE-HWVCLLRHAIYGLKQSGRQWFKKMCAALDEMGLSRSLVDHCVFYLDEDDDSVTLIIALSVDDTTIAGTNNAVLWFKTEISKRFEMTDLGEMHWILGIEVRRDRAARTLSLSQRAYIDGLMARFNLEDAKPLSTPLEPGAILSIRQCPSTPREFEDMRNVPYREAIGSLMYAALGTRPDIAFAVTALSQFMQNPGRAHWEAAKRVLRYLKSTREKWLTYGLTRNGVEGFSDA--DWGSSEHRHSICGYVFLIDGGAVSWSAKKQPVVALSSTEAEYIALTHAAKEAIWVRYLLADI-LDPDVSKFALRLHTDNRSAIALAKDNAYHA 1422          
BLAST of mRNA_H-paniculata_contig47207.11741.1 vs. uniprot
Match: A0A401GN13_9APHY (Uncharacterized protein n=1 Tax=Sparassis crispa TaxID=139825 RepID=A0A401GN13_9APHY)

HSP 1 Score: 188 bits (477), Expect = 1.100e-48
Identity = 127/374 (33.96%), Postives = 191/374 (51.07%), Query Frame = 1
Query:    1 RPVAQGFSQVEGEDFFETSAPVAHMSTLRTIFSLAAEHDFELEGVDVDAAYLNAPVEEELFVKLPPEVSTFSRDIPFVRRLRKSLYGLKQSGRNWNNTVDDFLVGIGLDRSTTDSCFYFSRDDGGETNLLVAVYVDDLVIAG------------------------------RLRRDRPNGTRTISEGSYIREVLERYDFDECRGVSTPAEGKVKIS------APDRGRSGNSSEYRGMVGSLMYASTGARPDTSYVVRHAARRMEDPCREDFSTCKRIFVISV------LCLSSALRSAVRVMVTVWKDSLMPIGRKMSRNESPQQDTLNGGAISLCSRKQQVATWSSTEAEYIAAEEAGKEAVYLRELLGSI 996
            R VAQGF+QV G DF ET APVA ++++R I +LAA +D+EL  +DV  AYLN  +EEE++++ PP  +   ++   V RL++ LYGLKQSGR ++  +   L  +GL RS  D C ++ R++     LL+A+ VDD  IAG                               +RRDR   T ++S+ +YI  +L R++  + + ++TP +    +S       P +     +  YR  +GSLMYA+ G RPD +Y V   ++ M++P R  +   KR+F          L                W  +      +   + S     L+GGA+S  ++KQ V   SSTEAEYIA   A KEA++LR LL  +
Sbjct:  988 RLVAQGFTQVPGIDFNETFAPVAKLASIRLILALAARYDWELHQMDVKGAYLNGDLEEEIYMRQPPGQAEPGKE-HLVCRLKRPLYGLKQSGRQFHKKISGELGSMGLTRSKVDHCVFWLRNEEDVLILLIALSVDDSTIAGTKAAVFWFKREISTRFEMSDLGEMHWILGIEVRRDRDARTLSLSQRAYIDMILTRFNLQDAKSLTTPLDPGTVLSIHQCPSTPRQFEDMKNIPYREAIGSLMYAALGTRPDIAYAVTALSQFMQNPGRPHWEAAKRVFRYLAGTRERWLTFGETTDGVEGFSDADWGSA------EHRHSISGYVFLLDGGAVSWSAKKQNVVALSSTEAEYIAITHATKEALWLRSLLADV 1354          
BLAST of mRNA_H-paniculata_contig47207.11741.1 vs. uniprot
Match: A0A0J7K690_LASNI (Retrovirus-related pol polyprotein from transposon tnt 1-94 (Fragment) n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K690_LASNI)

HSP 1 Score: 187 bits (474), Expect = 2.080e-48
Identity = 123/356 (34.55%), Postives = 187/356 (52.53%), Query Frame = 1
Query:    1 RPVAQGFSQVEGEDFFETSAPVAHMSTLRTIFSLAAEHDFELEGVDVDAAYLNAPVEEELFVKLPPEVSTFSRDIPFVRRLRKSLYGLKQSGRNWNNTVDDFLVGIGLDRSTTDSCFYFSRDDGGETNLLVAVYVDDLVIAGRLRRDRPNGTRTISEGSYIREVLERYDFDECRGVSTPAE-GKVKISAPDRGRSGNSSEYRGMVGSLMYASTGARPDTSYVVRHAARRMEDPCREDFSTCKRI--FVISVLCLSSALRSAVRVMVTVWKDSLMPIGRKMSRNESPQQDTLNGGAISLCSRKQQVATWSSTEAEYIAAEEAGKEAVYLRELLGSIGFDAGGARHCLRTINQPLISV 1059
            R V +GFSQ  G D+ ET APV    ++R +FSLAA+ DFE+   D+  A+LN  ++EE+F++LP  V+    D   V +L+KSLYGLKQS R WN     FL       S  D C Y    +G    +L+A+YVDD ++  + ++        +   +Y+  V +R++ ++ +G+STP E GK  +   +   +G +  YR  VGSLM+A+   RPD  + V   +R +E    E ++  KRI  +             A    + ++ DS         R+ S       GG IS  S +Q++   S+TEAEY+AA +A KEA+++R L+ S+G  A G    LR  NQ  I +
Sbjct:  631 RLVVRGFSQRPGIDYNETYAPVIRYESIRFLFSLAAKEDFEIAQFDIKTAFLNGELDEEIFMQLPTRVT----DAGNVVKLQKSLYGLKQSPRQWNKRFHQFLCKFNFISSEADRCVYKGNIEG--ERVLLALYVDDGLVMAKTQQ-------AVEMKNYLLRVAKRFNMEDAKGISTPMEAGKYLVINNNDTSAGMNVPYREAVGSLMFAACVTRPDIMFAVAVVSRYLEQSATEHWTAVKRIIRYAKETADYGIVYDGATAEPLVIYSDSDFAADPDTRRSTSGYVTVHCGGPISWQSIRQKIVALSTTEAEYVAASDATKEAIWIRRLMKSVGAAAVGHATELRLDNQGSIKL 973          
BLAST of mRNA_H-paniculata_contig47207.11741.1 vs. uniprot
Match: A0A0K8TKJ8_TABBR (Putative polyprotein (Fragment) n=1 Tax=Tabanus bromius TaxID=304241 RepID=A0A0K8TKJ8_TABBR)

HSP 1 Score: 179 bits (455), Expect = 8.840e-48
Identity = 126/363 (34.71%), Postives = 183/363 (50.41%), Query Frame = 1
Query:    1 RPVAQGFSQVEGEDFFETSAPVAHMSTLRTIFSLAAEHDFELEGVDVDAAYLNAPVEEELFVKLPPEVSTFSRDIPFVRRLRKSLYGLKQSGRNWNNTVDDFLVGIGLDRSTTDSCFYFSRDDGGETNLLVAVYVDDLVIA-----------GRLRRDRPNGTRT-----------------ISEGSYIREVLERYDFDECRGVSTPAEGKVKISAPDRGRSGNSSEYRGMVGSLMYASTGARPDTSYVVRHAARRMEDPCREDFSTCKRIFVISVLCLSSAL---RSAVRVMVTVWKDSLMPIGRKMSRNESPQQDTLNGGAISLCSRKQQVATWSSTEAEYIAAEEAGKEAVYLRELLGSI 996
            R V +GFSQ  G D+ ET +PVA M T+R+I S+AA     L   DV  A+L   +EE +F+K P     +      V  L++SLYGLKQ+ R WN  + DFL G G   S  D C Y    +G +  L++ +YVDD ++A           G L+ +    +++                 IS+ +Y +++LER++F  C+ VSTP     +IS P +        YR  VG+LMY   G RPD +Y V   +R++E+P +ED    KR+F      L   +   R+    ++ V+ D+      K  R+ S       GGAIS  S++Q V   S+TEAE IAA E  KEA++L  L   I
Sbjct:   65 RLVVKGFSQRHGIDYSETFSPVAKMGTIRSILSIAASEKMHLTQFDVSTAFLYGELEETVFMKQP---QGYEDGTSKVCLLKRSLYGLKQAPRCWNKRLGDFLRGHGFKASDADPCLYVRERNGKK--LILVIYVDDGLLAATDAQEMDIFIGELKSEFKIVSKSADYFLGLEIEQEENFIKISQKTYAKKILERFNFSNCKPVSTPMLKGTEISTPGKDDKTTGFPYRQAVGALMYLMLGTRPDLAYSVGFISRKLENPTQEDVVRVKRVFRYIAGTLDFGILYHRNMDVGVLEVYSDADFGGCIKTGRSTSGIIVKYAGGAISWLSQRQAVVATSTTEAEIIAANEGAKEAIWLSRLFRGI 422          
BLAST of mRNA_H-paniculata_contig47207.11741.1 vs. uniprot
Match: A0A4Y9ZJA2_9AGAM (Integrase catalytic domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZJA2_9AGAM)

HSP 1 Score: 184 bits (467), Expect = 2.290e-47
Identity = 138/369 (37.40%), Postives = 186/369 (50.41%), Query Frame = 1
Query:    1 RPVAQGFSQVEGEDFFETSAPVAHMSTLRTIFSLAAEHDFELEGVDVDAAYLNAPVEEELFVKLPPEVSTFSRDIPFVRRLRKSLYGLKQSGRNWNNTVDDFLVGIGLDRSTTD-SCFYFSRDDGGETNLLVAVYVDDLVIA-----------------------GRLR--------RDRPNGTRTISEGSYIREVLERYDFDECRGVSTPAEGKVKISAPDRGRSGNSSEYRGMVGSLMYASTGARPDTSYVVRHAARRMEDPCREDFSTCKRIF-----VISVLCLSSALRSAVRVMVTVWKDSLMPIGRKMSRNESPQQDTLNGGAISLCSRKQQVATWSSTEAEYIAAEEAGKEAVYLRELLGSI 996
            R VA+GF+QVEG DF ET APV   ++LRT+ +L A+HD EL  +DV  AYLN  +EEE++++ PP    F  D   V RL KS+YGLKQ+GR W   ++     +G  RS  D   F F RD  G T L++ +YVDD+  A                       G +R        RDR     T+S+  YI +VLER+ F + R +STP     K+         ++ +Y+  VGSLMYA  G RPD +Y V   ++    P  E ++   R F           + +  R    +  T + DS         R+ S    TL G AIS  S+KQQ    SSTEAEY+AA  A KEAV+LR LL  +
Sbjct:  961 RVVAKGFTQVEGIDFDETFAPVMKFNSLRTLLALTAKHDLELHQMDVKTAYLNGDLEEEIYMEPPPG---FRGDGNIVWRLIKSIYGLKQAGRVWYMRIEREFRDLGYSRSYADYGVFVFHRDSDG-TLLIIIIYVDDIGAASNSMEAILQAKARLSKIFEITDLGEMRWILGMEVTRDRALKIVTLSQKRYIADVLERHGFADARPISTPVSVNQKLEKLPAAEI-DARKYQSAVGSLMYAMLGTRPDIAYAVGLLSQHSSAPGAEHWNVAARTFKYLRRTADYQLVYNGKRKNDEL--TGYVDSDWANDPNDRRSISGYVFTLAGAAISWSSKKQQSVAQSSTEAEYMAAAHATKEAVWLRMLLSDL 1322          
BLAST of mRNA_H-paniculata_contig47207.11741.1 vs. uniprot
Match: UPI00193CA733 (uncharacterized protein LOC105202753 n=1 Tax=Solenopsis invicta TaxID=13686 RepID=UPI00193CA733)

HSP 1 Score: 183 bits (464), Expect = 2.640e-47
Identity = 129/402 (32.09%), Postives = 196/402 (48.76%), Query Frame = 1
Query:    1 RPVAQGFSQVEGEDFFETSAPVAHMSTLRTIFSLAAEHDFELEGVDVDAAYLNAPVEEELFVKLPPEVSTFSRDIPFVRRLRKSLYGLKQSGRNWNNTVDDFLVGIGLDRSTTDSCFYFSRDDGGETNLLVAVYVDDLVIAG-------RLRRD-----------------------RPNGTRTISEGSYIREVLERYDFDECRGVSTPAEGKVKIS-APDRGRSGNSSEYRGMVGSLMYASTGARPDTSYVVRHAARRMEDPCREDFSTCKRIFVISVLCLSSALR--SAVRVMVTVWKDSLMPIGRKMSRNESPQQDTLNGGAISLCSRKQQVATWSSTEAEYIAAEEAGKEAVYLRELLGSIGFDAGGA-------RHCLRTINQPLISVR----DLAH 1074
            R VA+GFSQ  GED++ET APV    T+R +  +AA+    +  +DV +AYLN  +EEE+F++ PP      ++   V RLRKSLYGLKQS R WN    + LV IG      + C Y  ++  G T   V +YVDDL++AG        + RD                       + +G+  +++   I ++LE Y   E +  +TP E     S + D  +  N+++YR  +GSL+Y +T +RPD +  V    RR+E P + D+   KR+       ++ +L+  S   + +  + DS     +   ++ S     L  G ++  SRKQ     SSTEAEYIAA  A KE ++ R+LL  +     G        + C+R I       R    D+ H
Sbjct:  401 RLVARGFSQAYGEDYYETFAPVVKHETIRVLLCIAAQKGLHVRHLDVKSAYLNGQLEEEIFLEQPPGFQKSGQESK-VLRLRKSLYGLKQSARAWNKRATEALVQIGFRPGKAEHCLYTRKERNGTTTY-VLLYVDDLLVAGTSTKITEEVSRDLQEYFDIKDLGDVNHYLGVQIKRQADGSSLLNQKGKITKILEEYGLLEPKPAATPMETNFLNSRSDDSAKIPNNNKYRKAIGSLLYIATVSRPDIATAVGILCRRVEKPTKRDWEAVKRVMRYLAFTINKSLQLSSTDTMELECFVDSDWAGDKTDRKSTSGYVFCLGKGTVAWSSRKQTSVATSSTEAEYIAASHASKEVLWFRQLLKDMNIPRKGPTKINEDNQGCIRLIESDRCGARTKHIDICH 800          
BLAST of mRNA_H-paniculata_contig47207.11741.1 vs. uniprot
Match: A0A5S6Q3I8_TRIMR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Trichuris muris TaxID=70415 RepID=A0A5S6Q3I8_TRIMR)

HSP 1 Score: 179 bits (454), Expect = 2.950e-47
Identity = 133/428 (31.07%), Postives = 208/428 (48.60%), Query Frame = 1
Query:    1 RPVAQGFSQVEGEDFFETSAPVAHMSTLRTIFSLAAEHDFELEGVDVDAAYLNAPVEEELFVKLPPEVSTFSRDIPFVRRLRKSLYGLKQSGRNWNNTVDDFLVGIGLDRSTTDSCFYFSRDDGGETNLLVAVYVDDLVIAGR---------LRRDRPNGTRTISE--------------GSY-------IREVLERYDFDECRGVSTPAE-GKVKISAPDRGRSGNSSEYRGMVGSLMYASTGARPDTSYVVRHAARRMEDPCREDFSTCKRI--FVISVLCLSSALRSAVRVMVTVWKDSLMPIGRKMSRNESPQQDTLNGGAISLCSRKQQVATWSSTEAEYIAAEEAGKEAVYLRELLGSIGFDAGGARHCLRTINQPLISVRD--LAHTAGQNTSECVGTEFESGFGKECWH*NICRPAINLL 1179
            R VA+GFSQ  GED+ ET APV    T+R + SLAA     +  +DV AAYLN+P+EEEL+VK PP      ++   V  LRKSLYGLKQS R WN    D L  +G +++  D C +  ++  G    ++ +YVDDL++ G          ++ D+   T+ + E              GS        I ++LE+Y   EC+   TP E G + ++        N+ +YR  +GSL+Y +T +RPD +  V    R +E P   D+   KR+  ++ +   ++  L SA  + +  + D+     +   ++ +     L    ++  SRKQ V   SSTEAEY+A   A +E ++LR+LL  +G                 I+V+D  + H   Q   + V +E    +G    H ++C   +  L
Sbjct:   94 RLVARGFSQRYGEDYDETFAPVVKHDTVRVLLSLAAAQKLHVRHLDVKAAYLNSPLEEELYVKQPPGFEVQGQEHK-VLLLRKSLYGLKQSARAWNKMATDTLTSLGFEQAMADHCLFSKKEKNGSRTYIL-IYVDDLLVVGATPKITKEVGIQMDKFFQTKDLGEVKNYLGIQIEREGDGSILLHQRNKIEQLLEQYGLMECKPAPTPMETGFLSVNQESPPMPDNT-KYRQAIGSLLYVATVSRPDIAAPVGFLCRHVEKPTEADWKAVKRVMRYLAATKYMTLRLSSAGGIDLQCYVDADWAGDKADRKSTTGFVFQLGKNTVAWSSRKQSVVALSSTEAEYLAVSHACRELLWLRQLLKDLG-----------------IAVKDPTIIHEDNQACIKMVNSER---YGARTKHVDVCHHHVRDL 498          
BLAST of mRNA_H-paniculata_contig47207.11741.1 vs. uniprot
Match: A0A2G8RW53_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8RW53_9APHY)

HSP 1 Score: 184 bits (466), Expect = 3.480e-47
Identity = 132/380 (34.74%), Postives = 187/380 (49.21%), Query Frame = 1
Query:    1 RPVAQGFSQVEGEDFF--ETSAPVAHMSTLRTIFSLAAEHDFELEGVDVDAAYLNAPVEEELFVKLPPEVSTFSRDIPFVRRLRKSLYGLKQSGRNWNNTVDDFLVGIGLDRSTTDSCFYFSRDDGGETNLLVAVYVDDLVIAG------------------------------RLRRDRPNGTRTISEGSYIREVLERYDFDECRGVSTPAEGKVKI------SAPDRGRSGNSSEYRGMVGSLMYASTGARPDTSYVVRHAARRMEDPCREDFSTCKRIFVISVLCLSSALRSAVRVMVTVWKDSLMPI--------GRKMSRNESPQQD--TLNGGAISLCSRKQQVATWSSTEAEYIAAEEAGKEAVYLRELLGSI 996
            R VAQGFSQV G D+   ET APV+ + ++RTI +LAA HD+EL  +DV +AYLN  +EE +++  PP  S        V RL+K+LYGLKQ+GR W  T+   ++ +G  R   D   ++ R+  GE+ ++VA  VDDL IAG                               +RRD    T  IS+ SYI   + R++ ++   +S P +    +      S P +        YR  VGSLMYA+ G RPD ++ V   ++ M++P R  +   KR+                R +  V+ D    +        G  M    S      TL+GGAIS  S+KQ V   SSTEAEYIA   A KEA++LR +L  +
Sbjct: 1877 RLVAQGFSQVPGRDYHDDETFAPVSRLPSIRTILALAARHDWELRQMDVKSAYLNGTLEETVYMHQPPSFS-MPEQSHLVCRLKKTLYGLKQAGRGWYKTLTAAMLQMGFTRCVADHAVFYKRE--GESAIIVAASVDDLTIAGTSDLVNAFAADIKQRFEMSDLGNLHWILGIEVRRDCQARTIAISQRSYIDTTVSRFNLEDAAPLSIPLQPGSPLGQHQSPSTPRQFEDMRDVPYREAVGSLMYAAMGTRPDVTFAVTALSQFMQNPGRAHWDAIKRVL---------RYLKGTRELWLVYGDDNNGLHSFSDADWGSSMEHRHSISGYVFTLDGGAISWSSKKQNVVALSSTEAEYIALTHATKEAIWLRYVLADV 2244          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig47207.11741.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A284QR55_ARMOS2.660e-5032.46Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2G8RWY5_9APHY2.460e-4936.44Transcription factor n=1 Tax=Ganoderma sinense ZZ0... [more]
A0A401GQU1_9APHY8.190e-4934.16Uncharacterized protein n=3 Tax=Sparassis crispa T... [more]
A0A401GN13_9APHY1.100e-4833.96Uncharacterized protein n=1 Tax=Sparassis crispa T... [more]
A0A0J7K690_LASNI2.080e-4834.55Retrovirus-related pol polyprotein from transposon... [more]
A0A0K8TKJ8_TABBR8.840e-4834.71Putative polyprotein (Fragment) n=1 Tax=Tabanus br... [more]
A0A4Y9ZJA2_9AGAM2.290e-4737.40Integrase catalytic domain-containing protein n=1 ... [more]
UPI00193CA7332.640e-4732.09uncharacterized protein LOC105202753 n=1 Tax=Solen... [more]
A0A5S6Q3I8_TRIMR2.950e-4731.07Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2G8RW53_9APHY3.480e-4734.74Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig47207contigH-paniculata_contig47207:66..1469 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score155.6
Seed ortholog evalue4.3e-35
Seed eggNOG ortholog15368.BRADI0007S00200.2
KEGG koko:K20093
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs37THH@33090,3GG2K@35493,3INI6@38820,3M96M@4447,COG2801@1,KOG0017@2759
EC3.6.4.12
COG Functional cat.L
Best tax levelPoales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03036
Exons3
Model size1235
Cds size1077
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig47207.11741.1prot_H-paniculata_contig47207.11741.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig47207 152..1397 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930404.2786279-UTR-H-paniculata_contig47207:65..1511622930404.2786279-UTR-H-paniculata_contig47207:65..151Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig47207 66..151 -
1691481276.367576-UTR-H-paniculata_contig47207:65..1511691481276.367576-UTR-H-paniculata_contig47207:65..151Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig47207 66..151 -
1622930404.344715-UTR-H-paniculata_contig47207:1397..14691622930404.344715-UTR-H-paniculata_contig47207:1397..1469Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig47207 1398..1469 -
1691481276.4150844-UTR-H-paniculata_contig47207:1397..14691691481276.4150844-UTR-H-paniculata_contig47207:1397..1469Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig47207 1398..1469 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930404.29216-CDS-H-paniculata_contig47207:151..7311622930404.29216-CDS-H-paniculata_contig47207:151..731Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig47207 152..731 -
1691481276.3786006-CDS-H-paniculata_contig47207:151..7311691481276.3786006-CDS-H-paniculata_contig47207:151..731Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig47207 152..731 -
1622930404.3090293-CDS-H-paniculata_contig47207:809..9481622930404.3090293-CDS-H-paniculata_contig47207:809..948Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig47207 810..948 -
1691481276.3873277-CDS-H-paniculata_contig47207:809..9481691481276.3873277-CDS-H-paniculata_contig47207:809..948Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig47207 810..948 -
1622930404.3243012-CDS-H-paniculata_contig47207:1039..13971622930404.3243012-CDS-H-paniculata_contig47207:1039..1397Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig47207 1040..1397 -
1691481276.39841-CDS-H-paniculata_contig47207:1039..13971691481276.39841-CDS-H-paniculata_contig47207:1039..1397Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig47207 1040..1397 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig47207.11741.1

>prot_H-paniculata_contig47207.11741.1 ID=prot_H-paniculata_contig47207.11741.1|Name=mRNA_H-paniculata_contig47207.11741.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=359bp
MSTLRTIFSLAAEHDFELEGVDVDAAYLNAPVEEELFVKLPPEVSTFSRD
IPFVRRLRKSLYGLKQSGRNWNNTVDDFLVGIGLDRSTTDSCFYFSRDDG
GETNLLVAVYVDDLVIAGRLRRDRPNGTRTISEGSYIREVLERYDFDECR
GVSTPAEGKVKISAPDRGRSGNSSEYRGMVGSLMYASTGARPDTSYVVRH
AARRMEDPCREDFSTCKRIFVISVLCLSSALRSAVRVMVTVWKDSLMPIG
RKMSRNESPQQDTLNGGAISLCSRKQQVATWSSTEAEYIAAEEAGKEAVY
LRELLGSIGFDAGGARHCLRTINQPLISVRDLAHTAGQNTSECVGTEFES
GFGKECWH*
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mRNA from alignment at H-paniculata_contig47207:66..1469-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig47207.11741.1 ID=mRNA_H-paniculata_contig47207.11741.1|Name=mRNA_H-paniculata_contig47207.11741.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1404bp|location=Sequence derived from alignment at H-paniculata_contig47207:66..1469- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CGACCGGTGGCTCAAGGTTTTTCACAGGTGGAGGGTGAAGATTTCTTTGA AACCAGTGCCCCCGTAGCTCACATGTCGACGTTACGTACTATTTTTAGCC TGGCCGCCGAACATGATTTCGAATTAGAAGGCGTGGACGTAGATGCGGCG TATCTGAACGCCCCAGTAGAAGAAGAGCTGTTTGTTAAGCTACCCCCCGA GGTTTCCACTTTCTCCCGAGACATACCGTTTGTGCGCCGCCTGCGTAAAA GCCTGTACGGCCTCAAGCAGAGCGGTCGAAACTGGAATAACACTGTTGAC GATTTTCTTGTTGGGATAGGACTCGACCGTTCCACTACCGACTCATGCTT CTACTTTTCCCGCGACGATGGGGGAGAGACAAACCTTCTGGTGGCCGTCT ATGTTGACGACCTGGTCATTGCTGGCCGTCGTGAAAACAGTAGACGAGTT CAAGCATAACATAAGTCAGCGTTTTAGGATGAAAGACTTGGGCTCTCTCT CGCGCGTGTTGGGAATAAAAGTACGACGTGACCGCCCTAATGGTACCAGA ACCATCTCGGAGGGTAGCTACATCCGCGAGGTACTAGAAAGATACGATTT TGATGAATGTCGAGGAGTATCCACCCCTGCAGAGGGAAAAGTGAAGATTT CGGCACCCGAGTCGGCCGACAAGCCCTCCGAACAGAAGTCACTTCAAGCT GTACCATCGGACATAGGCGCAGGAATACAAGAAAGCAGCAGAGGGAGAAG TGGCAATTCATCTGAATACAGAGGTATGGTAGGATCACTCATGTACGCCT CGACAGGAGCTAGACCTGATACGTCATATGTGGTACGCCACGCAGCACGT CGTATGGAGGACCCATGTCGGGAAGACTTCAGTACATGCAAGCGCATTTT CGTTATCTCAGTACTGTGCCTGAGCTCGGCATTACGTTCGGCGGTAAGAG TAATGGTCACGGTCTGGAAGGATTCGTTGATGCCCATTGGGCGGAAGATG TCGAGGAACGAAAGTCCACAACAGGATACATTGAACGGTGGTGCAATAAG TTTGTGCTCTAGGAAGCAACAGGTAGCCACGTGGTCCAGTACAGAGGCAG AGTACATTGCTGCAGAAGAAGCGGGAAAGGAGGCGGTATATCTTAGGGAG TTACTAGGATCGATAGGTTTCGATGCAGGGGGAGCACGACATTGTTTGAG GACAATAAATCAGCCATTAATCTCAGTAAGAGATCTGGCTCACACTGCAG GACAAAACACATCGGAGTGCGTTGGCACGGAATTCGAGAGTGGATTCGGG AAGGAATGTTGGCATTGAAATATCTGCAGACCGGCGATCAACTTACTGAC ATTTTAACGACAAGACTAAGCAGAGTACAGTTTCAGAAACTGAGAAATTT ACTC
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Coding sequence (CDS) from alignment at H-paniculata_contig47207:66..1469-

>mRNA_H-paniculata_contig47207.11741.1 ID=mRNA_H-paniculata_contig47207.11741.1|Name=mRNA_H-paniculata_contig47207.11741.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2154bp|location=Sequence derived from alignment at H-paniculata_contig47207:66..1469- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCGACGTTACGTACTATTTTTAGCCTGGCCGCCGAACATGATTTCGA
ATTAGAAGGCGTGGACGTAGATGCGGCGTATCTGAACGCCCCAGTAGAAG
AAGAGCTGTTTGTTAAGCTACCCCCCGAGGTTTCCACTTTCTCCCGAGAC
ATACCGTTTGTGCGCCGCCTGCGTAAAAGCCTGTACGGCCTCAAGCAGAG
CGGTCGAAACTGGAATAACACTGTTGACGATTTTCTTGTTGGGATAGGAC
TCGACCGTTCCACTACCGACTCATGCTTCTACTTTTCCCGCGACGATGGG
GGAGAGACAAACCTTCTGGTGGCCGTCTATGTTGACGACCTGGTCATTGC
TGGCCGTCATGTCGACGTTACGTACTATTTTTAGCCTGGCCGCCGAACAT
GATTTCGAATTAGAAGGCGTGGACGTAGATGCGGCGTATCTGAACGCCCC
AGTAGAAGAAGAGCTGTTTGTTAAGCTACCCCCCGAGGTTTCCACTTTCT
CCCGAGACATACCGTTTGTGCGCCGCCTGCGTAAAAGCCTGTACGGCCTC
AAGCAGAGCGGTCGAAACTGGAATAACACTGTTGACGATTTTCTTGTTGG
GATAGGACTCGACCGTTCCACTACCGACTCATGCTTCTACTTTTCCCGCG
ACGATGGGGGAGAGACAAACCTTCTGGTGGCCGTCTATGTTGACGACCTG
GTCATTGCTGGCCGTCTACGACGTGACCGCCCTAATGGTACCAGAACCAT
CTCGGAGGGTAGCTACATCCGCGAGGTACTAGAAAGATACGATTTTGATG
AATGTCGAGGAGTATCCACCCCTGCAGAGGGAAAAGTGAAGATTTCGGCA
CCCGATACGACGTGACCGCCCTAATGGTACCAGAACCATCTCGGAGGGTA
GCTACATCCGCGAGGTACTAGAAAGATACGATTTTGATGAATGTCGAGGA
GTATCCACCCCTGCAGAGGGAAAAGTGAAGATTTCGGCACCCGACAGAGG
GAGAAGTGGCAATTCATCTGAATACAGAGGTATGGTAGGATCACTCATGT
ACGCCTCGACAGGAGCTAGACCTGATACGTCATATGTGGTACGCCACGCA
GCACGTCGTATGGAGGACCCATGTCGGGAAGACTTCAGTACATGCAAGCG
CATTTTCGTTATCTCAGTACTGTGCCTGAGCTCGGCATTACGTTCGGCGG
TAAGAGTAATGGTCACGGTCTGGAAGGATTCGTTGATGCCCATTGGGCGG
AAGATGTCGAGGAACGAAAGTCCACAACAGGATACATTGAACGGTGGTGC
AATAAGTTTGTGCTCTAGGAAGCAACAGGTAGCCACGTGGTCCAGTACAG
AGGCAGAGTACATTGCTGCAGAAGAAGCGGGAAAGGAGGCGGTATATCTT
AGGGAGTTACTAGGATCGATAGGTTTCGATGCAGGGGGAGCACGACATTG
TTTGAGGACAATAAATCAGCCATTAATCTCAGTAAGAGATCTGGCTCACA
CTGCAGGACAAAACACATCGGAGTGCGTTGGCACGGAATTCGAGAGTGGA
TTCGGGAAGGAATGTTGGCATTGACAGAGGGAGAAGTGGCAATTCATCTG
AATACAGAGGTATGGTAGGATCACTCATGTACGCCTCGACAGGAGCTAGA
CCTGATACGTCATATGTGGTACGCCACGCAGCACGTCGTATGGAGGACCC
ATGTCGGGAAGACTTCAGTACATGCAAGCGCATTTTCGTTATCTCAGTAC
TGTGCCTGAGCTCGGCATTACGTTCGGCGGTAAGAGTAATGGTCACGGTC
TGGAAGGATTCGTTGATGCCCATTGGGCGGAAGATGTCGAGGAACGAAAG
TCCACAACAGGATACATTGAACGGTGGTGCAATAAGTTTGTGCTCTAGGA
AGCAACAGGTAGCCACGTGGTCCAGTACAGAGGCAGAGTACATTGCTGCA
GAAGAAGCGGGAAAGGAGGCGGTATATCTTAGGGAGTTACTAGGATCGAT
AGGTTTCGATGCAGGGGGAGCACGACATTGTTTGAGGACAATAAATCAGC
CATTAATCTCAGTAAGAGATCTGGCTCACACTGCAGGACAAAACACATCG
GAGTGCGTTGGCACGGAATTCGAGAGTGGATTCGGGAAGGAATGTTGGCA
TTGA
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