mRNA_H-paniculata_contig4718.11735.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig4718.11735.1
Unique NamemRNA_H-paniculata_contig4718.11735.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig4718.11735.1 vs. uniprot
Match: D8LNC2_ECTSI (COP9 signalosome complex subunit 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LNC2_ECTSI)

HSP 1 Score: 170 bits (431), Expect = 2.070e-41
Identity = 100/163 (61.35%), Postives = 113/163 (69.33%), Query Frame = 3 
Query: 1308 QDFERILKTHHASLMGDPFIKLYMDDILRTMRTQ------------VLLKAIAPYTRVTLPHVASELNGIPISEVEDLLVSLILDGKLEGKIDQVNQVFLCGKAPAHAAGGIGYIAGAGANAGLVVGPASRRAAATRTTVAMGRWVDSLRSLQAKVAAKVDYR 1760
            +DFERILKTH ASLMGDPFIKLY+DDILRTMRTQ            VLLKAIAPYTRV LP++A ELN IP+++VEDLLVS ILDGK++GKIDQVNQV LCGK    AAGG    A + A A               T VA+ RW +SLRSL   +AAKVDYR
Sbjct:  352 KDFERILKTHRASLMGDPFIKLYIDDILRTMRTQKVSIMSNNTHFQVLLKAIAPYTRVKLPYLAGELNDIPVTDVEDLLVSCILDGKVDGKIDQVNQVVLCGKV-CPAAGGP---ASSEAGAXXXXXXXXXXXXXXXTAVALERWAESLRSLNTNIAAKVDYR 510
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BLAST of mRNA_H-paniculata_contig4718.11735.1 vs. uniprot
Match: A0A7S2V1L2_9STRA (COP9 signalosome complex subunit 2 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1L2_9STRA)

HSP 1 Score: 115 bits (289), Expect = 2.610e-25
Identity = 65/136 (47.79%), Postives = 87/136 (63.97%), Query Frame = 3 
Query: 1179 CLKMKFEVSLIASTWLHWGYCLSADVTSPTPSFDLASSVVSKHQD-----FERILKTHHASLMGDPFIKLYMDDILRTMRTQVLLKAIAPYTRVTLPHVASELNGIPISEVEDLLVSLILDGKLEGKIDQVNQVFL 1571
            CL+     S++  T +       A      P     +S+V   Q+     FERILK+H  SLM D FIK Y+DD+ +T+ T+VL+K I PYTRV++ H+ASELN IP +EVE LLV+LILDGK++GKIDQV  VF+
Sbjct:   42 CLQYLVLASMLQETSVDPFASQEARAYKGHPEIRAMTSLVESFQNDDIAQFERILKSHSHSLMSDSFIKAYIDDLRQTICTKVLVKVIGPYTRVSISHMASELNNIPETEVEALLVALILDGKIQGKIDQVQGVFI 177
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BLAST of mRNA_H-paniculata_contig4718.11735.1 vs. uniprot
Match: A0A7S3W5Y9_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3W5Y9_9SPIT)

HSP 1 Score: 114 bits (284), Expect = 5.750e-23
Identity = 54/97 (55.67%), Postives = 79/97 (81.44%), Query Frame = 3 
Query: 1281 LASSVVSKHQDFERILKTHHASLMGDPFIKLYMDDILRTMRTQVLLKAIAPYTRVTLPHVASELNGIPISEVEDLLVSLILDGKLEGKIDQVNQVFL 1571
            L++ + ++ ++FE++LK H AS+MGD FIKLY+DD+L+ +RTQVLL+ I PYTR+ L  +A+ELN IP++EVEDLLVSLILDG ++G +DQ+  + L
Sbjct:  306 LSAYMNNEIREFEKVLKQHSASVMGDAFIKLYLDDLLKNIRTQVLLRVIRPYTRIRLSFIATELN-IPLNEVEDLLVSLILDGHIDGHVDQIGSLLL 401
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BLAST of mRNA_H-paniculata_contig4718.11735.1 vs. uniprot
Match: A0A7S2S7L9_9STRA (COP9 signalosome complex subunit 2 (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S7L9_9STRA)

HSP 1 Score: 103 bits (257), Expect = 6.300e-22
Identity = 48/86 (55.81%), Postives = 70/86 (81.40%), Query Frame = 3 
Query: 1308 QDFERILKTHHASLMGDPFIKLYMDDILRTMRTQVLLKAIAPYTRVTLPHVASELNGIPISEVEDLLVSLILDGKLEGKIDQVNQV 1565
            + FERIL+ +   +M D FI+ ++ D+LRT+RTQVL K IAPY R+TL  ++++LNGIP+ +VE+LLV+LILDGKL+G+IDQV+ +
Sbjct:   58 EKFERILQRNEGQIMDDEFIREHLADLLRTIRTQVLRKIIAPYKRITLTAISTKLNGIPVDDVENLLVALILDGKLDGRIDQVSGI 143
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BLAST of mRNA_H-paniculata_contig4718.11735.1 vs. uniprot
Match: A0A367JKE9_RHIAZ (COP9 signalosome complex subunit 2 n=1 Tax=Rhizopus azygosporus TaxID=86630 RepID=A0A367JKE9_RHIAZ)

HSP 1 Score: 103 bits (257), Expect = 7.050e-22
Identity = 48/84 (57.14%), Postives = 68/84 (80.95%), Query Frame = 3 
Query: 1311 DFERILKTHHASLMGDPFIKLYMDDILRTMRTQVLLKAIAPYTRVTLPHVASELNGIPISEVEDLLVSLILDGKLEGKIDQVNQ 1562
            +FE+ILK +H ++MGDPFI+ Y+DD+LR +RTQV++K I PYTR+ +  ++ +LN IP  EVE+LLV LILD ++ GKIDQVN+
Sbjct:   41 EFEQILKANHNAIMGDPFIRAYIDDVLRNIRTQVVIKLIKPYTRIDINFISKQLN-IPEDEVEELLVGLILDDRISGKIDQVNR 123
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BLAST of mRNA_H-paniculata_contig4718.11735.1 vs. uniprot
Match: A0A2G2VNP3_CAPBA (PCI domain-containing protein n=1 Tax=Capsicum baccatum TaxID=33114 RepID=A0A2G2VNP3_CAPBA)

HSP 1 Score: 105 bits (262), Expect = 2.100e-21
Identity = 49/89 (55.06%), Postives = 71/89 (79.78%), Query Frame = 3 
Query: 1311 DFERILKTHHASLMGDPFIKLYMDDILRTMRTQVLLKAIAPYTRVTLPHVASELNGIPISEVEDLLVSLILDGKLEGKIDQVNQVFLCG 1577
            +FE+ILK++  ++M DPFI+ Y++D+LR +RTQVLLK I PYTR+ +P ++ ELN +P  +VE+LLVSLILD ++ G IDQVN++  CG
Sbjct:   92 EFEKILKSNRRTIMDDPFIRNYIEDLLRNVRTQVLLKIIKPYTRIRIPFISKELN-VPEKDVEELLVSLILDNRIHGHIDQVNRLLECG 179
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BLAST of mRNA_H-paniculata_contig4718.11735.1 vs. uniprot
Match: A0A4W5LJW0_9TELE (COP9 signalosome complex subunit 2 n=1 Tax=Hucho hucho TaxID=62062 RepID=A0A4W5LJW0_9TELE)

HSP 1 Score: 102 bits (254), Expect = 2.110e-21
Identity = 56/128 (43.75%), Postives = 85/128 (66.41%), Query Frame = 3 
Query: 1197 EVSLIASTWLHWGYCLSADVTSPTPSFDLASSVVSKHQ-----DFERILKTHHASLMGDPFIKLYMDDILRTMRTQVLLKAIAPYTRVTLPHVASELNGIPISEVEDLLVSLILDGKLEGKIDQVNQV 1565
             VSL+  T+L        D     P     +++VS +Q     +FE+ILKT+H+++M DPFI+ +++++LR +RTQVL+K I PYTR+ +P ++ ELN I + +VE LLV  ILDG + G+IDQVNQ+
Sbjct:    9 RVSLLMLTFLPQAKPYKND-----PDILAMTNLVSSYQNNDITEFEKILKTNHSNIMDDPFIREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELN-IDVCDVESLLVQCILDGTINGRIDQVNQL 130
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BLAST of mRNA_H-paniculata_contig4718.11735.1 vs. uniprot
Match: A0A0S7L811_9TELE (COP9 signalosome complex subunit 2 n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7L811_9TELE)

HSP 1 Score: 101 bits (251), Expect = 3.710e-21
Identity = 54/126 (42.86%), Postives = 81/126 (64.29%), Query Frame = 3 
Query: 1188 MKFEVSLIASTWLHWGYCLSADVTSPTPSFDLASSVVSKHQDFERILKTHHASLMGDPFIKLYMDDILRTMRTQVLLKAIAPYTRVTLPHVASELNGIPISEVEDLLVSLILDGKLEGKIDQVNQV 1565
            M+ EV  IA TW  +         S   + D+         +FE+ILKT+H+++M DPFI+ +++++LR +RTQVL+K I PYTR+ +P ++ ELN I + +VE LLV  ILD  + G+IDQVNQ+
Sbjct:    1 MRTEVPEIAETWEFFKQLRLFSFFSAYQNNDIT--------EFEKILKTNHSNIMDDPFIREHIEELLRNIRTQVLIKLIKPYTRIHIPFISKELN-IDVCDVESLLVQCILDNTIHGRIDQVNQL 117
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BLAST of mRNA_H-paniculata_contig4718.11735.1 vs. uniprot
Match: A0A167R3L1_PHYB8 (COP9 signalosome complex subunit 2 n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A167R3L1_PHYB8)

HSP 1 Score: 108 bits (270), Expect = 3.830e-21
Identity = 54/96 (56.25%), Postives = 76/96 (79.17%), Query Frame = 3 
Query: 1287 SSVVSKHQ-----DFERILKTHHASLMGDPFIKLYMDDILRTMRTQVLLKAIAPYTRVTLPHVASELNGIPISEVEDLLVSLILDGKLEGKIDQVN 1559
            +S+VS +Q     +FE+ILKT+H S+MGDPFI+ Y+DD+L+ +RTQVL+K I PYTR+ L  ++ +LN IP+ EVE+LLV LIL+ K+ G+IDQVN
Sbjct:  312 TSLVSAYQKKEIREFEKILKTNHNSIMGDPFIRTYIDDVLKNIRTQVLIKLIKPYTRIELGFISKQLN-IPVEEVEELLVGLILNEKIAGRIDQVN 406
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BLAST of mRNA_H-paniculata_contig4718.11735.1 vs. uniprot
Match: A0A2P6VF13_9CHLO (COP9 signalosome complex subunit 2 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VF13_9CHLO)

HSP 1 Score: 108 bits (269), Expect = 4.900e-21
Identity = 51/86 (59.30%), Postives = 70/86 (81.40%), Query Frame = 3 
Query: 1308 QDFERILKTHHASLMGDPFIKLYMDDILRTMRTQVLLKAIAPYTRVTLPHVASELNGIPISEVEDLLVSLILDGKLEGKIDQVNQV 1565
            +DFE IL+ H  ++MGDPFI  YM D+L  +RTQV+LKAI PYTRV +P +AS+LN +P ++VE LL+SLILDG++ G+IDQV+Q+
Sbjct:  319 RDFEAILRMHRGAIMGDPFISQYMRDLLANVRTQVVLKAIRPYTRVRIPFIASQLN-VPATDVEQLLISLILDGRVAGRIDQVHQL 403
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4718.11735.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNC2_ECTSI2.070e-4161.35COP9 signalosome complex subunit 2 n=2 Tax=Ectocar... [more]
A0A7S2V1L2_9STRA2.610e-2547.79COP9 signalosome complex subunit 2 n=1 Tax=Fibroca... [more]
A0A7S3W5Y9_9SPIT5.750e-2355.67Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]
A0A7S2S7L9_9STRA6.300e-2255.81COP9 signalosome complex subunit 2 (Fragment) n=1 ... [more]
A0A367JKE9_RHIAZ7.050e-2257.14COP9 signalosome complex subunit 2 n=1 Tax=Rhizopu... [more]
A0A2G2VNP3_CAPBA2.100e-2155.06PCI domain-containing protein n=1 Tax=Capsicum bac... [more]
A0A4W5LJW0_9TELE2.110e-2143.75COP9 signalosome complex subunit 2 n=1 Tax=Hucho h... [more]
A0A0S7L811_9TELE3.710e-2142.86COP9 signalosome complex subunit 2 n=1 Tax=Poecili... [more]
A0A167R3L1_PHYB83.830e-2156.25COP9 signalosome complex subunit 2 n=1 Tax=Phycomy... [more]
A0A2P6VF13_9CHLO4.900e-2159.30COP9 signalosome complex subunit 2 n=1 Tax=Micract... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4718contigH-paniculata_contig4718:688..5883 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score169.9
Seed ortholog evalue1.2e-39
Seed eggNOG ortholog2880.D8LNC2
Preferred nameCOPS2
KEGG koko:K12176
Hectar predicted targeting categorysignal peptide
GOsGO:0000003,GO:0000122,GO:0000338,GO:0000715,GO:0000909,GO:0002009,GO:0003006,GO:0003674,GO:0003712,GO:0003714,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006283,GO:0006289,GO:0006351,GO:0006355,GO:0006357,GO:0006366,GO:0006464,GO:0006508,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007281,GO:0007282,GO:0007283,GO:0007292,GO:0007293,GO:0007399,GO:0007517,GO:0007519,GO:0008134,GO:0008150,GO:0008152,GO:0008180,GO:0008230,GO:0008231,GO:0008283,GO:0008356,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009653,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0014706,GO:0016043,GO:0016070,GO:0016333,GO:0016922,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0019827,GO:0019953,GO:0022008,GO:0022412,GO:0022414,GO:0023052,GO:0030154,GO:0030163,GO:0030182,GO:0030582,GO:0030584,GO:0030718,GO:0030727,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031647,GO:0031935,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032504,GO:0032774,GO:0032991,GO:0033043,GO:0033044,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0035257,GO:0035914,GO:0036099,GO:0036211,GO:0042802,GO:0042803,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043235,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044798,GO:0045892,GO:0045934,GO:0046483,GO:0046983,GO:0048134,GO:0048135,GO:0048138,GO:0048140,GO:0048142,GO:0048232,GO:0048468,GO:0048477,GO:0048513,GO:0048519,GO:0048523,GO:0048608,GO:0048609,GO:0048646,GO:0048699,GO:0048729,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050821,GO:0050896,GO:0051128,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051276,GO:0051301,GO:0051427,GO:0051704,GO:0051716,GO:0060255,GO:0060429,GO:0060537,GO:0060538,GO:0060968,GO:0061061,GO:0061458,GO:0065007,GO:0065008,GO:0070013,GO:0070646,GO:0070647,GO:0070791,GO:0071704,GO:0071840,GO:0075259,GO:0080090,GO:0090052,GO:0090054,GO:0090304,GO:0090575,GO:0097659,GO:0098727,GO:0140110,GO:1901360,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1902275,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141
EggNOG free text desc.protein deneddylation
EggNOG OGsCOG5159@1,KOG1464@2759
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04121
Exons2
Model size3130
Cds size576
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4718.11735.1prot_H-paniculata_contig4718.11735.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig4718 1875..4516 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930403.5267725-UTR-H-paniculata_contig4718:687..18741622930403.5267725-UTR-H-paniculata_contig4718:687..1874Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4718 688..1874 +
1691481275.8810847-UTR-H-paniculata_contig4718:687..18741691481275.8810847-UTR-H-paniculata_contig4718:687..1874Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4718 688..1874 +
1622930403.5572124-UTR-H-paniculata_contig4718:4516..58831622930403.5572124-UTR-H-paniculata_contig4718:4516..5883Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4718 4517..5883 +
1691481275.9246554-UTR-H-paniculata_contig4718:4516..58831691481275.9246554-UTR-H-paniculata_contig4718:4516..5883Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig4718 4517..5883 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930403.5372972-CDS-H-paniculata_contig4718:1874..22401622930403.5372972-CDS-H-paniculata_contig4718:1874..2240Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4718 1875..2240 +
1691481275.9074926-CDS-H-paniculata_contig4718:1874..22401691481275.9074926-CDS-H-paniculata_contig4718:1874..2240Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4718 1875..2240 +
1622930403.5472436-CDS-H-paniculata_contig4718:4306..45161622930403.5472436-CDS-H-paniculata_contig4718:4306..4516Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4718 4307..4516 +
1691481275.9150155-CDS-H-paniculata_contig4718:4306..45161691481275.9150155-CDS-H-paniculata_contig4718:4306..4516Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4718 4307..4516 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig4718.11735.1

>prot_H-paniculata_contig4718.11735.1 ID=prot_H-paniculata_contig4718.11735.1|Name=mRNA_H-paniculata_contig4718.11735.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=192bp
MKFEVSLIASTWLHWGYCLSADVTSPTPSFDLASSVVSKHQDFERILKTH
HASLMGDPFIKLYMDDILRTMRTQVLLKAIAPYTRVTLPHVASELNGIPI
SEVEDLLVSLILDGKLEGKIDQVNQVFLCGKAPAHAAGGIGYIAGAGANA
GLVVGPASRRAAATRTTVAMGRWVDSLRSLQAKVAAKVDYR*
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mRNA from alignment at H-paniculata_contig4718:688..5883+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig4718.11735.1 ID=mRNA_H-paniculata_contig4718.11735.1|Name=mRNA_H-paniculata_contig4718.11735.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5196bp|location=Sequence derived from alignment at H-paniculata_contig4718:688..5883+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGGTAACCGCAAGTGTATGGATGGAGGGGAGGGTCGGAGAGCAGGGGGGT
AAAGAACGAGTCATAATCTACCAAAAGATCAAATCACGTATGTAGAAACA
TCATAGTACAAAGATCCCAAAAGAAGACAGGTATGTTGAGCATTTTCAAG
CTCCTGGGTTACGTAGTTATTATCTATCAAATGAAGATGCTTGAGGCGGG
ACGATAACGTGGCTCATGGAGAATTCTTGTCGCCATGCCCAAACCATGGT
TTCTTCCATAGATGATCCAAGCGTTTCATGTCTACGTTATAATGAGAAGC
GTGTAGATGGAGGGGGTGAAGGGCGGCTGCCGCGGTCGACTTGGCCATTG
GCTTCGCGTTCACGCTTGAGGGCTGAGGTCAGCGGGGCGGGGTGCAGTCA
GGGCACTTACGATGTACGTGAAACTCACGAGACGTGTTGAAATATTTGTG
GTCGGTTGCATTTTGAAAAATGGAGAGACCCTGTTATACTTCCGCTGTCC
CATTAGACAGTCAGTTGTGTATACGGCAGATGATATCTCCAGATGTAAGA
CTATCCAGAGGCTGGGGTTGGAATCGTTGGAAAGCTAAGATCTGATGGAC
GTATGTATATGCGCTCTTCAAAAGTGCATTTCGATTCGTGTATCATGATT
AATGGCCGCTCAAGCTTTGGCTAATTTTGCCCATTTTCACGGGGGTTTTT
TTGTTTTGTTTTTTTTCCGATTTTTAAGTTTTTCCATTGGACAAAGACAA
AAAGGGAAAAATAGGGCCTGTTTTTCGGCCGACAGTTTGTTTTTGCGCCG
TGTGCGCTCCCGGTGGATCTTGCCAATTTCCGTGAAATTTTGGGGATGAA
TCCGAAGAATATTTAGGGTAAAAGAGATCGGAGATAGTTACGTGCCTCTA
TAAACACAACCGACTACTTATGGCACAGAGAAAGGATAGGGTAAGTTGTG
GCACAATTTTCTCGTGAATCAATGCTCCATTTTTTTTTCTTCATATATAT
TTTTTCAATTGGAAGGGTGCGTCATTTTTGCCCATGTTCTTGTCCAATCT
AATAAATGGAGTAAAGTCAGTGATTTCTGTAGGCCTGCTGCTTAGTATTT
CACTTGTGTCGTTTGCCTAAAGCGGCGCAGTGCAGAACAGATGTGACCCC
CCCTTACTGATCTAATTTGGCTGATGGGTGTCTAAAAATGAAGTTTGAGG
TCAGCCTCATAGCTTCAACATGGTTACATTGGGGTTATTGTTTGAGCGCA
GATGTGACCTCCCCCACACCCTCCTTTGACTTGGCTTCTTCGGTCGTGAG
CAAACATCAGGACTTTGAACGTATCCTCAAGACACACCACGCGTCTCTCA
TGGGAGATCCATTTATCAAGCTCTACATGGATGACATTCTGAGGACGATG
CGAACACAAGTCTTGCTGAAGGCAATCGCTCCGTACACGCGAGTTACGCT
GCCGCACGTAGCCTCGGAGCTTAACGGTATACCGATATCTGAAGTGGAGG
ATCTGCTAGTCTCGCTCATTTTGGACGGAAAGCTGGAAGGAAAGATTGAT
CAGGTGCGAGCTGTGATGTCGGCTGCGGGAGATAAGATTTTTTTTTTTTT
TTACGCGCCCCCCCCCCCTCCCCCCATAAAATGTGTTTCAAATGCGATGT
TCTTGAAAAGTATGACCTTGCGACTGTCGAAAAAGCATGGTCATTGATGG
ATCTTGAGACCCTTCGAATGACCCAGCTGTCGGTGTCACTAGTATTATAG
CTTTCGAGAAAACCTGGCCTGAAAACGCTCTGACGGGTGTGTGGTCAAAG
GCTGTCATGGAATGTGTGGGAGGAGGGAAAGAAAAGGATGGTGGGCTGCT
CTCTTTTAGCTGGATTCCTTATTTGGATGTCTGTGCCGAGAAATAACGTG
CTACGTGGGGAGGTCAGAAAGCGCTTACAGTGTACGATGCCGTAGAGTGC
GCCTTTAACGACCTGGGGGCGAACTTGTCGTCTGTGTGTTGAAAATATTA
CGTCTGTCTAATGACGGATTTATCTCGATGAGATCTTTCCAATGACACAA
GTTTCGGTGTCGCTAAATAGCAAGATAGTGTTTTTTGGAGAAAATATGAC
TTGGAAAACATTGACCTTTAGGGCGTGATAAAAGCACTCTCAGGTATATC
CTACCACAACATAGAAAGGGCGTATGGTGAACACAACGATCTGTTGTGTA
TCATCTTCTTTCGTCTCGTAGGGCGACGTCACCAGGTGATATGATGTGCA
ATCAGTTAGTTAACATGCTGCCAAAATCGTAGTGTATACTTTCGTTCCAT
CGATCGACCGCATTCACGCGTTGGAGATGGTATAATTCGGTTTCATCCGT
GTTTTCAGTTCTGTTCTGTTAGCATACACGTATGCACAGAAGAGGCTGAC
AGCTTTTGGAGGCGTCGTGCCGGTGATGAGTGCATACAAGCACAGGTCGA
AATCAGCTGTATAACCTCAACATGGCTACAGAGAACTTTTAATATGAGGT
TCAGAGTCATAGTTCAACTGACTGTGGCAGGGTAATTTTGCTTCAGTAAT
GAGAACTTGAGGTAGCAAAATGGAGGGTTGATTTCAATTTTTCATTGTGT
CAGTCGTTATTGTCATACTCCTATGATGACCATTTCATGTTGCACCTACA
GTACACATGCGAGTGATGCATTGGTATTTCCTTGTGAACGTTACTGTAGT
TCATGTCGTGCGTGTTCGAAGAGGTGCGAGAAGTTCCGGTACTTGGTCAT
GATGGGATCAGAATTTTTGTCGTGTAAACAGCATTCTGATTATTTTGCCA
ACCAATGAATCTAAATACTGTTCCAATTCCATTCAAAAATTCAACTCACC
CCGTGAGCATGCGTAGGTGGGACTGGATGAGTTGTAGGCGCGATGATAGA
GGAGTAAGTACTTGTTCATGCAAAACTCGTTCAGCGTCATGTACTCCAAG
CTTTCACGTGGGGGGTAGGTAGTCCCTAGGTTACAGCTAGCACTCGCAAG
TGTGAGTAGAATTTGCTTATGGTAAGATAGATGTGTATTGAACTCACGTT
TTTACTCTTTATTTGGTGTGCCAACAGTCGTGTTCCTCTGCTGTAGAAGT
TTGTCCATTAGGCCATTTGTTCGGGTGTACTTTTTTTTTTTTTCCGACCC
CCGGAAGGCTAAGGCAACAACCTTTCTCCGATGCTTCCATACCGAATTAT
TTCTACATTTCCTTTAATCGGGTGTGTACCTTGTTGTTGAAAAATATTGA
CGAGGGTATAATTAGTATTCGGCATGTGAGATTGACGTGGGGCATATGGC
ATGCTCCCCCAGGTTAAATGCGGATGGTGATTTATAGTGTCCGTGCAATA
TGAGTGGTGGTGCGGGCATTGATTTATCTTGTCCGCGTGATGTAAGTGTG
AACATGGTAATTATTAACATGAATTGAGACTAATGTAGCAATATGTACTG
TACTGTGTACCCCCCTTTCCCTCCTTTATGAAGGGCTACTTAAGAAAACG
TATTGCCCACACCTTCGCGTACGTTCGCGTACGTTCCCGAATACGCATTT
GTAATTTCTCCTCAGCACTGCAAGATTGTGTTTTTTTATTCGGTTCCTTT
CTTTTCCCGTCGCGGTCAGGTGAATCAAGTGTTTTTATGTGGTAAGGCAC
CGGCGCATGCCGCGGGCGGCATTGGATATATCGCTGGTGCAGGTGCCAAC
GCTGGCTTGGTCGTTGGGCCTGCGTCGCGGCGAGCGGCGGCAACACGAAC
GACTGTAGCGATGGGACGATGGGTGGATTCTCTCCGATCACTACAAGCCA
AAGTCGCCGCGAAGGTTGATTATAGATGACCTGTGGTCGTTCATGCGGTC
GGGGGGCCGGGGGTCGCTGTGAATTTGTCAGGCGGACTGTGGGGCCCGTA
GTCTGTTGCTAGTGGACATCATATCATGTGTATGTCGCCTTGGTGTAGGT
CGCCTGTTTTTTATATATGGTGGAAGCAGAGAAGTGATGAATATATAAAC
TGATGGAGAAATGCACAATTTACGTAATCATTGTTCAGCCTTTGAGGGAA
AACCTACGATAGGTTTGTTGACAGGGTCGTACAGTAGGGAGCTGTATTAG
ATAGAGCTCGACGGAGCACGGCCGTCCTGGTTGAATGATCCGATCCGAAT
ATCAACAGCTTTCCCCCCGATACAAAGCTCCATGACCGCGTAGAAGTGGT
CGTGGCAGTCGAACACAGAACACCTGTCCCGACGATCCGCGGCCTTTTCC
CCAAGAAGACAAGTTGGTATATTGACGCGTGGTTACGAGATGAACTTCGA
GCGTCTTGTGGAACGTTCATGTCTGTGCTTTTGGTATCAAGGGACGTGTG
CCTCCAGTGAGGGTACTTCTCCTAGCTCCCTCTCTGTCACGAAGTTGTCG
TTTTTAATGGCATGCCATCGTTTTATCAAGTTGATTACTACCTGAGTCCC
CACATATGGGTGCTTGAATTTTGCCGAAAACGAGTATGCACATACGATGC
TTTAGTTCACAAGCTTGTCTTGGGAGTATTCTCCGTTGCTTGTTGGGTTG
TGCATTGCGTTGGTGATAGACAAATACCGGTTGGTTGGTAAAGGGACGTA
TTTTGTACGTAGAATTATGTTTTTTTTCCTTCGTTTTTTTTTTTGTAGTG
AGAGAAGTTGCGGGCATATTTTCCCTGCCTCTCAAATTGTTGGATCCTTC
AGGTTCCTTTTTTTTTTTTTTCCCCCAACAAAGAGAACTAATTAAAAACA
TAATACATAAACAGTAGACGTACGCATGTTCAGTATGTTACACAGTTTTT
TTTTTAATCTGTACACGCTAATGGGAGAAGAGTTTGTTGCGCTGTTTGTC
TTTCACCCTGGTTTTATTTTATTCAAACGTTGGAGGTGAATGCGGTGCTG
AAGGCATTTATCGGCGCAAAAATGAATGTTTGTTAAAATTGAAATTCCTT
GAAAATACAGTTGGAGGTTGAGGGAATAGCTTGTTTGGAATTATGCAAGG
ATCATCGTAGTAGTACAGTAAATATCCAGTATAGCGGTCTTGATTCAGTA
AGTTGGACCCGATAGGAAATGGAGGGAGGTAAGGAAGGAGGTGGAAATTG
AGAGAAAAAAGTAATATTTTCAACAGTATATTCATAAAATGAAGAATCCA
CTTTTAGCAAGAAATAGGAAGATCTTCCCCCGCTATGACCCCAAAG
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Coding sequence (CDS) from alignment at H-paniculata_contig4718:688..5883+

>mRNA_H-paniculata_contig4718.11735.1 ID=mRNA_H-paniculata_contig4718.11735.1|Name=mRNA_H-paniculata_contig4718.11735.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1152bp|location=Sequence derived from alignment at H-paniculata_contig4718:688..5883+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAGTTTGAGGTCAGCCTCATAGCTTCAACATGGTTACATTGGGGTTA
TTGTTTGAGCGCAGATGTGACCTCCCCCACACCCTCCTTTGACTTGGCTT
CTTCGGTCGTGAGCAAACATCAGGACTTTGAACGTATCCTCAAGACACAC
CACGCGTCTCTCATGGGAGATCCATTTATCAAGCTCTACATGGATGACAT
TCTGAGGACGATGCGAACACAAGTCTTGCTGAAGGCAATCGCTCCGTACA
CGCGAGTTACGCTGCCGCACGTAGCCTCGGAGCTTAACGGTATACCGATA
TCTGAAGTGGAGGATCTGCTAGTCTCGCTCATTTTGGACGGAAAGCTGGA
AGGAAAGATTGATCAGATGAAGTTTGAGGTCAGCCTCATAGCTTCAACAT
GGTTACATTGGGGTTATTGTTTGAGCGCAGATGTGACCTCCCCCACACCC
TCCTTTGACTTGGCTTCTTCGGTCGTGAGCAAACATCAGGACTTTGAACG
TATCCTCAAGACACACCACGCGTCTCTCATGGGAGATCCATTTATCAAGC
TCTACATGGATGACATTCTGAGGACGATGCGAACACAAGTCTTGCTGAAG
GCAATCGCTCCGTACACGCGAGTTACGCTGCCGCACGTAGCCTCGGAGCT
TAACGGTATACCGATATCTGAAGTGGAGGATCTGCTAGTCTCGCTCATTT
TGGACGGAAAGCTGGAAGGAAAGATTGATCAGGTGAATCAAGTGTTTTTA
TGTGGTAAGGCACCGGCGCATGCCGCGGGCGGCATTGGATATATCGCTGG
TGCAGGTGCCAACGCTGGCTTGGTCGTTGGGCCTGCGTCGCGGCGAGCGG
CGGCAACACGAACGACTGTAGCGATGGGACGATGGGTGGATTCTCTCCGA
TCACTACAAGCCAAAGTCGCCGCGAAGGTTGATTATAGATGAGTGAATCA
AGTGTTTTTATGTGGTAAGGCACCGGCGCATGCCGCGGGCGGCATTGGAT
ATATCGCTGGTGCAGGTGCCAACGCTGGCTTGGTCGTTGGGCCTGCGTCG
CGGCGAGCGGCGGCAACACGAACGACTGTAGCGATGGGACGATGGGTGGA
TTCTCTCCGATCACTACAAGCCAAAGTCGCCGCGAAGGTTGATTATAGAT
GA
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