prot_H-paniculata_contig4717.11733.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4717.11733.1
Unique Nameprot_H-paniculata_contig4717.11733.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length953
Homology
BLAST of mRNA_H-paniculata_contig4717.11733.1 vs. uniprot
Match: D7G501_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G501_ECTSI)

HSP 1 Score: 592 bits (1527), Expect = 7.580e-189
Identity = 444/963 (46.11%), Postives = 521/963 (54.10%), Query Frame = 0
Query:    9 TITQVLVAGAVAVLSPASRSTPAAGIGSLPFGRGGGGGINATA----------DPSPANNGGLDRAAMAEISR-------AERARWSDLETWMAASLSTLEVCTRCVTWNSPAGYIAGLAYVRLFSLVLRLLCPAAGENASETSLSGGGRTQKDAAARASALG--------WGTPVEETLD----------KLQWGRGRLASVVDDLMWRLREGLPGRDVRLRLLQVTCTHLRVLAFASGDYRVSDDVLMELVSVLQGELGELDAQAGVVTQQPQRAPAMTADYNSAAGGPGSSIRAPGGDSRRPFAPPHSTGGGGSVPRRASFGEDGEGFAGGXXXGYLSNGANGGVDE------------AGR--NIADVMAHELVVGSLVRLALSAESETAVEVLQVLGHERERARERERLGRGGVGPMEEVVMKGIRVVELLVVGQTGRNQPGDDAAGEGTQGGGSRPNALPGAAMENKSLLKTFLSTMDLGWQAAVQPDERVLGDGKAGAFDHEARAFPFLHRRLRRLLCGRENDTLLKIDPQFSRDGREKDGDDACCFGAEDEEGIFDAHAWQEEAPQCQLNGGSDPVVVTATYVVSYRQ----GWAVRSSSSGS-------------AGMEGWGAASGSGGG---------VMLRIRAYNTTNAKLLGFVIRLSFGQGVEAAGMGDGGRVETSVDEVLMPAAAYTLEVPVAPVGGLKDVVVHVTVIFPDAEPEPEFEQEGAAELLGGE----GLGAVAGGEGGTT-SFCGQDNPSEGVGXXXXXXXXXXXXXVRVTIHAGSYRLPAEAFLGPP--SAASWDAFQTVWSGLPYAHAIPVQNCR-IP-------GEEGL---LRTAAGVQLAMSVPTSSSSSNDA---DPRASAVVRCPGGNTDYAVSAAWAFEAWDGSPVLCALTAMKTPFSYVFTASGKDSATRRNGDGGAVGCCEQQQTWCGRME 875
            T  QVL AG VA LSPA+    A GIG+L   R       ATA          + S   NG  + AA             A++ RWSDLETW+  SL+ LE  TRCV WNS  GY+ GLAYVRL SLVLRLLCP     A     SG  R     A R    G         G  V   LD          +L W R RLA VVDDLMWRLREGLPGRD+RLRLLQ TCTH+ + A  SGD  V++D   ELVSVLQGELGELDAQAG  TQ P+ A A T+  +     PG       GD        H+  GG                   XXX                         +GR  ++ DVMAHELV+G LVRLAL  E ETA EV+ VL HER RAR RERLGRG VGPMEE+V KGIR ++LLV   T           +G+      P A+         LLK  + TMDLGW A VQPDER L    A  FDHE  AFP LHRRLRRLLCG         D + S    +  GD     GA      F+AHAW+EEAPQ QLNGGSDPVVVTA+++V +      G A  ++  G              AG++G  A+ G+  G         V LRIR +N TN +L GF IRLSFGQG EA GMG GGRVE++V EVLMP+AA+TLEVPV P+  L DV+VHV+V+FPD EPE EFE EG AELLG E    G G  +GG G    S  GQ+ PS   G             V V + AGSYR+PAEAFLGPP  +AA+W  FQ VW GL Y  AIPV++ R +P       G E     LRTA+GV+LAM +P SS         D R++A V CP GNTDYAVS+AW F+AWDG+PVLCALT MK PFS +  + G        G+         Q +W GR+E
Sbjct:  477 TCAQVLAAGVVAALSPAAEKAAAVGIGNLA--RSCDSRCRATAARSDTSEGHKNGSSVGNGNANFAAXXXXXXXXXXXXXAKKGRWSDLETWLDCSLTALEAFTRCVNWNSKTGYVGGLAYVRLLSLVLRLLCPLTAAPAD----SGDDRDSASTADRVLLGGRSYGGDGKGGVDVGVALDDDSTAGGGRGRLAWARQRLAHVVDDLMWRLREGLPGRDIRLRLLQATCTHVGLSAVVSGDVGVTEDSANELVSVLQGELGELDAQAGFSTQ-PRPARAATSGGDE----PGD------GDDGHRGTDAHAGRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQWESISSISGRTGSLTDVMAHELVIGCLVRLALVTEGETAHEVMSVLEHERGRARARERLGRGAVGPMEEIVAKGIRALQLLVFPST------SPKVADGS------PEAV---------LLKRLVRTMDLGWHAVVQPDERALTGSSAELFDHEVHAFPNLHRRLRRLLCGGIGVDTASTDERPSTGSGDFPGDLEA--GAAAVITPFEAHAWEEEAPQAQLNGGSDPVVVTASHIVYHGDSGTGGGACGATGGGGRALGPTTLAALAFAGVDGDAASPGTIPGLVGKVASRAVTLRIRVFNATNTRLHGFSIRLSFGQGGEAVGMGGGGRVESAVQEVLMPSAAHTLEVPVTPLDVLTDVIVHVSVVFPDTEPESEFESEGTAELLGVESTEKGRGGDSGGGGSNALSGFGQNQPSFDGGAGDTGVDGGGSGSVTVILQAGSYRVPAEAFLGPPERAAATWVGFQNVWCGLAYVTAIPVESARHLPRAITAAAGHEHAAMSLRTASGVRLAM-MPVSSRGGGGRGCDDARSAAAVECPVGNTDYAVSSAWVFQAWDGTPVLCALTVMKAPFSLLQASGGGXXXXXXXGE---------QPSWYGRLE 1389          
BLAST of mRNA_H-paniculata_contig4717.11733.1 vs. uniprot
Match: A0A836CDV2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDV2_9STRA)

HSP 1 Score: 152 bits (385), Expect = 6.910e-34
Identity = 279/1009 (27.65%), Postives = 390/1009 (38.65%), Query Frame = 0
Query:    9 TITQVLVAGAVAVLSPASRSTPAAGIGSLPFGRGGGGGINATADPSPANN----GGLDRAAMA----EISRAERARWSDLETWMAASLSTLEVCTRCVTWNSPAGYIAGLA--YVRLFSLVLRLLCPAAGENASETSLSGGGRTQKDAAARASALGWGTPVEETLDKLQW-GRGRLASV-------VDDLMWRLREGLPGRDVRLRLLQVTCTHLRVLAFASG---DYRVS----------DDVLMELVSVLQGELGELDAQAGVVTQQPQRAPAMTADYNSAAGGPGSSIRAPGGDSRRPFAPPHSTGGGGSVPRRASFGEDGEGFAGGXXXGYLSNGANGGVDEAGRNIADVMAHELVVGSLVRLALSAESETAVEVLQVLGHERERARERERLGRGGVGPMEEVVMKGIRVVELLVV-GQT----GRNQPGDDAAGEGTQGGGSRPNALP---GAAMENKSLLKTFLSTMDLGWQAAVQPDERV--LGDGKAGA-FDHEARAFPFLHRRLRRLLCGRENDTLLKIDPQFSRDGREKDGDDAC---CFGAEDEEGIFDAHA-WQEEAPQCQLNGGSDPVVVTATYVVSYRQGWAVRSSSSGSAGMEGWGAASGSGGGVMLRIRAYNTTNAKLLGFV-IRLSFGQGVEAAGMGDGGRVETSVDEVLMPAAAYTLEVPVAPVGGLKDVVVHVTVIFPDAEPEPEFEQEGAAELLGGEGLGAVAGGEGGTTSFCGQDNPSEGVGXXXXXXXXXXXXXVRVTIHAGSYRLPAEAFLGPPSAASWD----AFQTVWSGLPYAHAIPVQNCRIPGEEGLLRTAAGVQLAMSVPTSSSSSNDADP------------------RASAVVRCPGG---NTDYAVSAAWAFEAWDGSPVLCALTAMKTPFSYVFTAS---GKDSATRRNGDGGAVGCCEQQ-----QTWCGRMEVRCGSLACAGFAQTSSWRLTRFVTNGVFAPSGDGREQ-RQQQLYHPGAGSILATPAVGGLNG 936
            T   VL AGA A+   A+ + P+A   S       G  +N ++ PSP        G+ R  +A    + + A   RW DLE W+  S + L     CV W+  A   +  A  Y RL +L+LRL                             ALG  +P+     + Q  G  RLA         +D L W+L +G+PGR  R+ LL   C +L  ++ A+G   D + +          DD  ++LV+ +  EL  LDA A             T++  SAA                               R A +                                 V A   ++G LVRLA + +S  A   L+    ER+R   R+ LG  G GP+ +   + +  +E +   G+     G  +    AA     G    P  LP   G    + +  K  L    LG  A     ER   LG G  G  FD+                 G + +   ++   F    R   G       C            HA W   +P  QLNGGS+P+ +TA + ++ R  W   +S+ G             G GV LR+ AYN TN  +   + IRL FG G   A +     V   + + L+P A YT +VP+A   G + + V  T+    AEP+PE E + AAEL GG+ L                        XXXXXXXXXXXXX  + + AG Y + AEA L P +         AFQ+++SGL +  A+PV +   P    L    A + +AM  P     ++DA                    R +A V  P       D+A++AAWAFE W GS +   LTAMK P+     A+    +  A        AV             W GR+E RC  + CA      + RL  FVTNG FA    G +  R   +  PG G   A  A GG NG
Sbjct:  587 TCAYVLTAGATAI---AAATAPSADADS-------GDDVNGSSLPSPVQQQLPLSGVGRYPLAPHAPDAAAAAAERWCDLERWVTMSGAVLHATGLCVGWDGGAASASAGADGYTRLLTLILRLTSXXXXXXXXXXXX-----XXXXXXXXXXALGSPSPIFSPNPRPQLSGDARLARAAAAHVPRLDQLGWKLAQGMPGRRARVALLGALCRYLADVSGAAGQAADEQAARGVRLRPGEEDDAALDLVARVSVELAALDAPA-------------TSNLKSAAPXXXXXXXXXXXXXXXXXXXXXX------XERAAQW--------------------------------RVNAQHALLGCLVRLAAAYDS-AAAPALKAARAERDRVCLRDGLGGQGNGPLVDQARRAVAALEAVTRRGRASLAGGAAELAAAAAARAALGFIGTPPGLPPPAGPLSADDAARKAALRAALLGELALPPAQERDARLGCGGGGTGFDYRT---------------GAQQEVAARLSRHFRWPPRGGHGAAPLPPPCRALPGXXXXXRPHAAW---SPPTQLNGGSEPLHLTACHRLTPR--WRAHNSAGGXXXXX-------XGKGVSLRVCAYNATNGSITDALEIRLGFGAGAAPAAVPAAAVV---LRDRLLPGAVYTWDVPLALAPGWRALAVTATITMLHAEPDPELEADSAAELAGGDALLRAX--------XXXXXXXXXXXXXXXXXXXXXXXXXXPLVVGAGMYVVHAEALLLPRAXXXXXXXLAAFQSLFSGLAHRTALPVTSA--PWATSLCTNPAELAMAMGAPMPGDGTDDAAAPETADDLELLDADHGDGVRRTAWVPLPPALLSACDHAITAAWAFETWQGSAITAQLTAMKQPYGAADIAAIGGAESGALSPKALAAAVXXXXXXXXXAAHAWVGRLEFRCADVQCAETVAAHAARLAAFVTNGAFALLPAGSDVLRATSVRAPGRGGGSA--AAGGDNG 1486          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4717.11733.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G501_ECTSI7.580e-18946.11Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CDV2_9STRA6.910e-3427.65Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..953

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4717contigH-paniculata_contig4717:2775..14095 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4717.11733.1mRNA_H-paniculata_contig4717.11733.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4717 2775..14095 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4717.11733.1 ID=prot_H-paniculata_contig4717.11733.1|Name=mRNA_H-paniculata_contig4717.11733.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=953bp
MLSSFPCKTITQVLVAGAVAVLSPASRSTPAAGIGSLPFGRGGGGGINAT
ADPSPANNGGLDRAAMAEISRAERARWSDLETWMAASLSTLEVCTRCVTW
NSPAGYIAGLAYVRLFSLVLRLLCPAAGENASETSLSGGGRTQKDAAARA
SALGWGTPVEETLDKLQWGRGRLASVVDDLMWRLREGLPGRDVRLRLLQV
TCTHLRVLAFASGDYRVSDDVLMELVSVLQGELGELDAQAGVVTQQPQRA
PAMTADYNSAAGGPGSSIRAPGGDSRRPFAPPHSTGGGGSVPRRASFGED
GEGFAGGGGGGYLSNGANGGVDEAGRNIADVMAHELVVGSLVRLALSAES
ETAVEVLQVLGHERERARERERLGRGGVGPMEEVVMKGIRVVELLVVGQT
GRNQPGDDAAGEGTQGGGSRPNALPGAAMENKSLLKTFLSTMDLGWQAAV
QPDERVLGDGKAGAFDHEARAFPFLHRRLRRLLCGRENDTLLKIDPQFSR
DGREKDGDDACCFGAEDEEGIFDAHAWQEEAPQCQLNGGSDPVVVTATYV
VSYRQGWAVRSSSSGSAGMEGWGAASGSGGGVMLRIRAYNTTNAKLLGFV
IRLSFGQGVEAAGMGDGGRVETSVDEVLMPAAAYTLEVPVAPVGGLKDVV
VHVTVIFPDAEPEPEFEQEGAAELLGGEGLGAVAGGEGGTTSFCGQDNPS
EGVGAGAVGGGGGGSGSVRVTIHAGSYRLPAEAFLGPPSAASWDAFQTVW
SGLPYAHAIPVQNCRIPGEEGLLRTAAGVQLAMSVPTSSSSSNDADPRAS
AVVRCPGGNTDYAVSAAWAFEAWDGSPVLCALTAMKTPFSYVFTASGKDS
ATRRNGDGGAVGCCEQQQTWCGRMEVRCGSLACAGFAQTSSWRLTRFVTN
GVFAPSGDGREQRQQQLYHPGAGSILATPAVGGLNGGHVDWFSRTDVLGI
PPP
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