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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 6 |
| Model size | 1150 |
| Cds size | 645 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4710.11724.1 >prot_H-paniculata_contig4710.11724.1 ID=prot_H-paniculata_contig4710.11724.1|Name=mRNA_H-paniculata_contig4710.11724.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=215bp
MQQPYNGDQRWPHATRADMGNFGMNQAQWGLTGGDGTLVFTPQEGQQLFS
CSMKLNNEVVQLRRLNAACCKELVDVRRSRSNLEVELASTKLNYIDLEDL
KARLIQDKDTLATDWQKERDMRIMLEGQVTRLQAQLQALTPAPASPPAAG
VPSIPSPVQVGPSFDVIVSDILDGTDDDKRAKRYALMKQVGREPTLCAEI
LRKVYGNPNPQILG* back to topmRNA from alignment at H-paniculata_contig4710:752..8281+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig4710.11724.1 ID=mRNA_H-paniculata_contig4710.11724.1|Name=mRNA_H-paniculata_contig4710.11724.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7530bp|location=Sequence derived from alignment at H-paniculata_contig4710:752..8281+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ACTCCTGATTTGAACACGTTTTGACAGTTTGACACCACCACGAACCACCG
TACATACAGTTGAACTTTAAACTTTCTAGCGGAGAGTGCCTTTTCGCGGA
GGACTGGCTGGTTCGAACAGCGTGTCTTTATTTTGAACAGCGTGTGCTGG
GAGGCGAGGGCAGTCATCGGCCACGATTTACACACAAAATAAGAGTCGAT
ACTTGGACTTGGATCGACAGAGAGAGCGCTCGGGCACAGATAGGGCACCA
GAACACACGATCATGCAGCAGCCTTACAACGGCGACCAGCGATGGCCCCA
TGCCACCCGCGCCGATATGGGGAATTTCGGGATGAACCAGGCTCAGTGGG
GGCTGACGGGGGGTGACGGTACCTTGGTCTTCACCCCGCAGGTGAGGCGG
TATTTCCATGTTGACTTACATCATGGATAGGGAGGACAACAACTTGGTGT
AATACTGTACTGTACAGTACAGAAGTAGTATCATACTTGTACAGTGTACG
GGACCACCTGTAGAGAGACGACACGATCTTTTGGTGCGTCATGGAGCTCT
ATCCGTTTGTCTCACTCACAGTCGTCTCTTTCAATAAGAGTTCCTGCCTC
GGTGGGATGAGCTAGATGGCGCGGTATGGATTTGCCCGCCATGGCATTGT
GTGATCGGCACCTTGAAACTCTCTTTCGTTCAAAGTTGAGTCAAAGTTGA
AATTGGCAGGACCATACTAAAATATCCCTGATGACGGACATCTTTTATCG
GGTGCCACGCGCCCAGTACACACCCACAAGTGCGACAACAGTCGTAGGTT
TCGTTGCGGCTATCATAGGTATACTATATCAACAAATGCGCGCTTTTAAA
GTCGTTATCTGAGTGCGTTTAGAGTTGTTTGTACCCAGTGTCTATCTGAA
CAACTTCGCAATTTGCGCCCAAAAGGTGGCTGCTAGGAATGGCCCTTATC
TCTGATCTTCAGTTCTAATGCCTCATGACTGTACACACGTATGGACTGCA
ACCTACAACACAGAGATAACGATCAATATCACTCACTCGCGGTCTAGCTC
CCTACAGGAAAGTGTGCACCTATTACTTCCGTGGGATGCATAGATCTTAT
CATGATCTGTATATGGGTGCCCACCCACCCGTAGATATGTTGCAAATGCT
CCTTGGGGGCAGAGATCGACCGCTTCGCAACCACCGCAGTCGTATGCACA
GAAAGATAATAACCTGGATGCCAATACACTGCAGCAGTCGATTGCATCGT
GTGTGTGAGGCTTCAGATGTTGAGGTTGTCGACATGGATGATATGGGTGG
GAATAGTCCGACATGATGGAGGATGAGACGATGAGATCAATCAATGGTGT
TGATGAGTTGTTGGTGTAGAAATTTTGCATGGCATGAACGCATGAACGCA
TGAACCCATGAATTCCAAAGCTTCTACAGTAACTGTCTGTACAATACTAC
TTGCGGAGTATAATTTACTACAAAAAGTAACTGCTGCAAGTTACTCAGTG
GTGCTGGTTGTATCTATACCGACTAGACTTCGATGAACCTTACCACGTGT
ACTGACTGTATGTCCGCGTGGGTGGCATCAATGAAGTGTGACACGCAGAC
GAATGTATTCCTTGGTCATTCTGGTTACTTGATATTTGGTGGTCGGATGC
TGGGTGCGATGTGCATGTCTGTCTGCTGCTTTGTCGATGATGCCGCATAG
TCGTGTCTGCAAGTAGATGTCTATACATAGATGTGCGTGCTGTTGACAAA
TTGACACCGCTGAGCAACGACGGCGGAGCATAGAGGAGCTATTGCTGTAT
GGAGCGGTTAGTTTAGCTTGTAGCTCGTAGGTAGCTCATTGCTTGTAGTA
GTTCAGATATTCCCTTGGACGTTGACCCGGCTTCCTCCTACTTTGACAGT
CGAGATTACACATTGATTGATAAGAGAGACAGACAGACCGTCGCCGGCGA
GCGTTCCGTGCTGTTATTAGTAGTACATGAGAGATATAGAAGACGTTTCT
TTCTCTAGTAGAGCTCTAATACGGTAATATTTTCAATCCAACCCCAGGGC
TGTATCTCTCCTCGCACGCTCCTCGTACAGCAGTTCCTCAAAAGTAGAAG
TCGATACTTCTTGTAGATTGGAAGTGATCCAATACAGAGCAGAGATCAAT
TTGGCACTAGTTAGTAGATGCCGAGTCGAAGAAATTAAAGACTCAAAATA
CAATTGATCCCTACTTGTATTGAGACCCAGAACACTGAAACCGTTTCTTC
TGGAAAGTTCCGGATCATGTGTCACACTGCTACTTTATTCCGCCGCAACC
TTCCCACAACTTACTGCTTCTCATAACTCAAAGCCAGTCCTTCAGCCTGT
AACTATCACTGATCCTACTGAGAACAAGTCTATAAAGCATTAAATACGAA
CGCAAACCACGCGCTTCTGCGAGCTGATAATCCAGCGGCGAATGAGAGCT
TATTTGCAGATCACTTTGGACTACTCTTCTAAATAGTTACTCTCTCATCT
AGCTCCACACTACGGCTATCTCTACAACAGTAGTGCGTACACCGACCTAC
CGAAGTGTATCTTGACTTGTCTTGAGGTTACAAAAAGAAACAACGGGCGG
AACCTTTACTGGCCGCAATGTAATAGACGTGACCGTTAAGCCAGGTGTGT
CTGAAGCTGGCATTTGCTAGCTCCCCGGGCCTCGTGCTACACTCGTACTG
TTACTTTTTTGGTGATGCCCGGGCAGACGTCATTACTCGACCTGTCGTGA
AGATTGTGATGGTCGATTCTCAAACACTAACACTACAACAGTTGTACCGT
AAAATTGAAGTAGCACCATATTGCGAGCTGTTCCAAGCGAGCCCGATCAA
GTTTTCGCGTTGCTTTGCCCCTCGACACGCCCCGCCGTGACACTGCGTCA
CCCCCTAGATTACCGTTCGAGACGACCTAATTACACGTACTAGGGCAATC
CAACCATTATTTCGTTGGGTGTTTATTCGATATACGGAAATTTACGCGAC
ACAGCCACTAGAGTTCTTTTTGTAATTACAAGCATTAATAGTAGTTGTCC
AGACGATACCATGGTATACAGTGTGTACTCAGCACGGTATGTACTATGTA
CTAAAGGCAAGTAAGTAGTAGTCAAATAGAACGGAAACAACAATAAGCTG
TTCGGGTGTTTTTGAACTCGGATCGCGTCGTTAATCTAGCTTGCTCAATC
GACCTATTATTTGGAGCCTCTTACAACATACAACATACTGTAGAAGTAGT
GGTCTCGACCACACGATTCATTAGTTTTGTACTGTTGCCATGGTTATACA
GCCGTAGCGCCGGCGCGGTAGGTAGTCTCTCGCAACATAATGGAGCTGAT
TTACCGAACGGACGGCGGTATACACGTATACACCGCAGCCGACATATCTT
CCGGTGTGACTCCTCCTTCGAATATTCCTTCTGCTCCCAAACTTGAGAAG
TGCTTGGCTGCCATCTCCATCTGCATCTACTGTAGGGGACACGCTTCAAC
CAGCTTGGGAGTCTCGTTACTCACTGGGTGATGTCGTTCGATCTCCTAAT
GTATGGACCAAGACCCCGTATCCAGGATGGGCGACAAACCGTTAACCGTT
CAAAAGATGGATGGATGGATGGATGGATTGATTGATTGATTGTCGTTATC
ATCATTCTACTTTGTACGGAGGCGTCTTTTCCGGCGCATCGAAAAAAAAT
AGGAACAACTGTTCAGTCAGCTCACCATGAGGGAAAGTAGAGTACGATAT
AGCATTTATTTGTTGTTCACCAGCACAGAAGTAATCCGAAGCCACGGTAG
GGGTGGTTAGTATTTTCGCGTGTATCTGGAGGTAACGTATTTCTTGCCCT
AACCGCTACTATTAGAACAAGATATTTTATCCCGCCCTTGACTTTCCTTC
CAGGAGGGTCAGCAGTTGTTCTCCTGCTCTATGAAGCTCAACAACGAGGT
CGTGCAACTTCGGCGTTTGAACGCCGCTTGTTGCAAGGAGTTGGTCGACG
TTCGCAGGAGCAGAAGCAATTTGGAGGTCGAGGTGAGAGGTGTAAGGTTC
GAGATGTATACATACAAAAGGTTCTCCTCCATGACCCATTAGATAAGTAC
GTTGCTGCAGTTGTTCCCACGTGCTTCGCGCCGTGCCGTCCGCCATTCAT
CATTTACTATGTGTATTACGTGGAACTATAGAGTAAAAGGTGGTGATGCT
CCAATGAATATACCGAGTAAAACGTTGTGGAACTCAACCCAACGTGGTGA
TATATCAACATGATGCTACTTATTGGCTCGTTCGGACAGTGAATACCATC
TTGATCAACACCCGTGCTTCCTGTCCGTACGCCCATATCCCACGCAATTT
GGAACGTATTCATACTGCTGCAGCTTGCCTCGACAAAACTCAATTACATC
GATCTCGAAGACCTCAAGGCACGGCTGATCCAGGACAAAGATACCCTCGC
CACCGACTGGCAGAAGGAGCGCGACATGCGGATCATGTTGGAGGTGCGTG
CGTGTGTGGTATATGTCATCAATCGGTGCGATATCTGGAAATCTCCACAC
GACTTACTGGGCCTCGTCTGTGTGAGTTACGTGAAACATAGGCCCCAATA
CCATCGTGCACCCGGAAACGAGGATGGGGAGGGGAGGGGCGAAAATGCTC
TACTATAGCTCAAGTAGTGTAACAATGTCTTTGATTATACCCGTTGAGGG
TAAACAGCTGACCTCAAATTTCACGTGTGTGTGTATAGTTATCAAGAAGA
TTATGTCAGATCGGAAGCGAAAATAACCGCCGCCTGTACTGCCGTGCTCT
ATGTACGTGCTTGTTTAGATGTATTATGTCGTGCCGCTTGTGGTATTAGT
AATGTATATGTTCTCCATGTCTGTCCATGACACATGACCATAATACCGCA
TGTTCTTCTTGTATGGCTTAGTGTGTGGACTCGGTGGAGATGACTGGTGT
TGTTTGTTGTATGCCGCTTGTTGCTTGTAGAGGGTGTGTTGAACAGGTTG
ATATGCTACAACGCGATACATTTATCTGCTTACAGATTGTGCGTAACATG
TGTGCTTCATCTGTACCACTTTTGAGTGGGCTCACTCATGCCGCGTTGTT
CATGCTGATTACAATTCGACTTTACTTATTTGCTTGCTGCTGGTACAGCT
GATAATTTCGAATGTTTTATCATGTTGATTTACCATTTTCCAACACAAAT
ATTCCAATCATGATGATTTCATGCTACCCTGTCGAGGCGAGTTGGATCAG
GCCTCTGAATCGGGTTCCATCTGCTAGTCGTCATAATCCCTCTCTTACCA
TGTGTGTAACACGTACTTTACTGCATTATTACGCGTTTCGGCGGCCACTA
ACCGTGGATCTGAGGGGCTCCGTTGATGATACGAGACAATATGGGCCAAG
AGGGAACTGCGTGGGGTAGCAAAGAACTACACATACTGCAGCACTACCGT
CAAAACAACGAAACCAGTATGTTTTTGGGAGGGAGGGATGAGCATATGTT
CAAACCCTAACACTGAAGGTTACGAGGGCCCTCGCACGAATCTCGAATTC
TCTTCCACTCCAGTATCACTCTTCCCTGTGCAAGCTAGCTGAAAATAAAT
GGCGCCATTACATTTCGTCACTACAGTACCGAAGTATTGATAATATATAT
CTAGAGCTCTATATTATGCCGTATGTGCCTCGCGACCGCCTGACACACGT
GTGCAGGGTGACACCGACATGCGCGATTGTGTGCATGTTTCATAGCCGAC
CAGCCGACGGTAGAGAGACATAGTAATTATAGTCAATCCTGATTATTATC
CTAATGTACTATACAAGTACGTATTGATTAGCTCCACCTACCAAGTGCAC
TGCTGCTGTCATTAATCTGGTCCTCGAAAGTGCATACATGCATATGCATA
CCATGGATGATATTTTCGTTGGACAGAGCAGATTTATGATATGTTCCGCA
AGCAGTGCTGGAGTAGAGTAAATACAGCACCTACACGTAAGATAGAGGAT
AGAGCTTTCCATCGTTTCACCATGCGTCCGCTGGTTGTGCGTTTTTCTCT
CTCCCTTTTTCTAGGGACAGGTGACGCGGCTCCAGGCGCAACTGCAAGCC
TTAACCCCTGCCCCCGCTTCTCCGCCTGCGGCTGGGGTGCCTTCGATCCC
TAGCCCTGTGCAAGTAGGCCCAAGTTTCGATGTGATAGTGAGTGATATCC
TGGACGGCACCGACGACGACAAACGGGCTAAGCGATACGCCCTCATGAAG
CAGGTCGGAAGAGAACCTACACTCTGTGCAGAAATTCTTCGGAAGGTGTA
CGGTAACCCCAACCCGCAGATCCTCGGCTAGGGTACTTTCGGCTTCGTGA
CGGTCGAAGGTTCCTACGCGATTAAATTCGCAAAGGTGAGCTAATATTTT
CCCAACCAGAGAGCATGCTGTAAATGAAAGGCAGCGGAACCGTGTCTTGC
CACCCATTCCGTAGCCTCCTACTCTTAGCTGTATAATTCTTCATGAGTGG
CTAACTGCCAGAGCTGTGTATGGTATGGGCAATCAGTCCTCCTCGACCAC
GCCAACCACGTCCACTTGCCGCTTTAGCGAGTAATAATGATGAGTAGATG
TGATTTTCTGGTCGTTCACGTATTTTCTTGGCTTTGTATTTGGTAAACAT
GTCTGTGTAACGGTGGACAAGAAAGATCGGCACTGTGCATATGAAGATAT
TGCCATTTTCGTACATGGTAGTTCGCGTGCTCTATCCTTATCCTTTCAAA
GCTTTCCTCTCCGTTGAGCGGCAGTCGTCCGAACATGGTGGTATAGAGAT
GTAAATACAAGAAACGAAATCCACCTGTTCCTACAGCTCAGAACACGTCT
GTCCGCTCTTCCCCGCATGCTGCTGCTGCTCTTACCGCTACTGTTGCGGT
TCTTAATTCAATAGGAGAACATAGATCGTGTACAGCTGAGGGAGCTGCTG
GCTCACGCTTGGTGAGAATATATCGCTTTGATGCAGCCATCGTGATTGAA
TATCTCTTACACACAGCTGTTCGAACGCGGCTAGGGGACTAACACGTGTA
GCACATTGATTCGTTTTTAGCTTTTGTTTGTTTGGTTTGGTTTGGTTTGG
TTTGGTTTGGTTTGGTTTGGTTTGGTTTGGTTTGATTTGATTTGGTTTGT
TTGTTTTTCACCGTTATGAGTACTTGCGCGTGCGGGAAACGGATACACAC
AGTTCATCCACTGGCTAGCTGGGTAGTAGGTGTTCCGTCCAAAATTTTGG
CTTGGCTCGGCTTGGTTTGAGAGCTCGTACTACTACCACCATAGTTCCTT
TTTTACGACCAATAGGTGATAAGATTTCCCAGTGAAAGCAACGGTGCCAT
TTTTTATGTTGCCGTGTCGTGTTGTTTTGCTTTCCCAGGGTCGGAGCGCA
TCCGAACATGGTCCACATCGTGGCAATGGACCCGATCGCCGCCGGTGTGC
CTCTGATCATGCAGAAGGCTGATATGAGTTTGTCCCATCTGGCGCAAGAC
AAGTCTGTGGCTGTGTCGACCATCCTGAAG back to topCoding sequence (CDS) from alignment at H-paniculata_contig4710:752..8281+ >mRNA_H-paniculata_contig4710.11724.1 ID=mRNA_H-paniculata_contig4710.11724.1|Name=mRNA_H-paniculata_contig4710.11724.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1290bp|location=Sequence derived from alignment at H-paniculata_contig4710:752..8281+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCAGCAGCCTTACAACGGCGACCAGCGATGGCCCCATGCCACCCGCGC
CGATATGGGGAATTTCGGGATGAACCAGGCTCAGTGGGGGCTGACGGGGG
GTGACGGTACCTTGGTCTTCACCCCGCAGATGCAGCAGCCTTACAACGGC
GACCAGCGATGGCCCCATGCCACCCGCGCCGATATGGGGAATTTCGGGAT
GAACCAGGCTCAGTGGGGGCTGACGGGGGGTGACGGTACCTTGGTCTTCA
CCCCGCAGGAGGGTCAGCAGTTGTTCTCCTGCTCTATGAAGCTCAACAAC
GAGGTCGTGCAACTTCGGCGTTTGAACGCCGCTTGTTGCAAGGAGTTGGT
CGACGTTCGCAGGAGCAGAAGCAATTTGGAGGTCGAGGAGGGTCAGCAGT
TGTTCTCCTGCTCTATGAAGCTCAACAACGAGGTCGTGCAACTTCGGCGT
TTGAACGCCGCTTGTTGCAAGGAGTTGGTCGACGTTCGCAGGAGCAGAAG
CAATTTGGAGGTCGAGCTTGCCTCGACAAAACTCAATTACATCGATCTCG
AAGACCTCAAGGCACGGCTGATCCAGGACAAAGATACCCTCGCCACCGAC
TGGCAGAAGGAGCGCGACATGCGGATCATGTTGGAGCTTGCCTCGACAAA
ACTCAATTACATCGATCTCGAAGACCTCAAGGCACGGCTGATCCAGGACA
AAGATACCCTCGCCACCGACTGGCAGAAGGAGCGCGACATGCGGATCATG
TTGGAGGGACAGGTGACGCGGCTCCAGGCGCAACTGCAAGCCTTAACCCC
TGCCCCCGCTTCTCCGCCTGCGGCTGGGGTGCCTTCGATCCCTAGCCCTG
TGCAAGTAGGCCCAAGTTTCGATGTGATAGTGAGTGATATCCTGGACGGC
ACCGACGACGACAAACGGGCTAAGCGATACGCCCTCATGAAGCAGGTCGG
AAGAGAACCTACACTCTGTGCAGAAATTCTTCGGAAGGTGTACGGTAACC
CCAACCCGCAGATCCTCGGCTAGGGACAGGTGACGCGGCTCCAGGCGCAA
CTGCAAGCCTTAACCCCTGCCCCCGCTTCTCCGCCTGCGGCTGGGGTGCC
TTCGATCCCTAGCCCTGTGCAAGTAGGCCCAAGTTTCGATGTGATAGTGA
GTGATATCCTGGACGGCACCGACGACGACAAACGGGCTAAGCGATACGCC
CTCATGAAGCAGGTCGGAAGAGAACCTACACTCTGTGCAGAAATTCTTCG
GAAGGTGTACGGTAACCCCAACCCGCAGATCCTCGGCTAG back to top
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