prot_H-paniculata_contig4709.11720.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4709.11720.1
Unique Nameprot_H-paniculata_contig4709.11720.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length974
Homology
BLAST of mRNA_H-paniculata_contig4709.11720.1 vs. uniprot
Match: A0A6H5JHM0_9PHAE (PH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHM0_9PHAE)

HSP 1 Score: 128 bits (321), Expect = 3.000e-26
Identity = 268/663 (40.42%), Postives = 311/663 (46.91%), Query Frame = 0
Query:    1 MAGERRAALAKVAELGEQKRILIREVKAARSSLADASAVNRRLARAYESLDRSLRAAAAASLSTEALTSPNTXXXXXXXXXXXXXXXXXXXXXXXXXXDDSYRSTAVETAPAVEGLHLAAAANPTAAXXXXXXAAGRR-------HGDSAGL---PFPGRLTRPSS-----------------PGGSSVGSSSAAXXXXXXXXXXXXXVAAEWRQVRVASCATREKRRRNSSSADSFGEAGGGAGXRGRGGVESGGCGVGGGDIEGVRSVAATGG---VQVRNLSTGDVDVVVPGGGA-RARAATEGDALLGSKKV--RGWAGLKEKARVKLFLKITQGFTSASWPW--------------------------------VGSGASGGGPKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSITDGSTSSATA-IAGVSIPT------------------VAAKNSISTSSNNMGNSICHHXXXXPVPSISLSDLEGADSELEXXXXXXXXXXHDAGDIADALITPAFSTSAGSRSHEGEVMAEVGRGGSGEEDEVGMAXXXXXXXXXXXEERDGGHRRVSVGALLCRRCGGTVEGPLHSTCSCTVPQLQEG-LGPEASAAPSATAGMLKLKGVFKTFNGRVEVARQMLDSAIRQNMSNNM 578
            MAGERRAA+AKVAEL EQKR+L+REVK +R SLA+AS+VNRRL RAYESL++SLR                 XXXXXXXXXXXXXXXXXXXXXXXXXX            P+ +G   +  A  TAA      AAG R       +G  AGL   P P  L RP +                             XXXXXXXXXXXXX   EWR+ R+   A    RR    S            X GRG           G   G R  +ATG    +Q RNLSTGDVDV+VP     R RA+TE     G   V  R  A   E     L LKITQ F +ASWPW                                VG+G S G    XXXXXXXXXXXXXXXXXXXXXXXX           DG +++ATA  A V                      V A   +  S   MG+S         VPS+ L +         XXXXXX     D   + D          A      GEV  EV  GG                             R SVGAL+CRRCGGT EGP +STC+C+VP+L  G   P       ATAG+ KLKGVFK+FNG V+VARQMLD+A+RQN+++N+
Sbjct:  439 MAGERRAAVAKVAELSEQKRLLVREVKLSRRSLAEASSVNRRLVRAYESLEQSLRTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-PSDDGACDSGKAVGTAAPVAAARAAGERAVSDSSTNGGGAGLAANPIP--LLRPGTREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEWREARLDGTAVEAGRRSRGGSXXXXXXXX--XXXVGRGST---------GSWHGAREGSATGPGLMMQFRNLSTGDVDVLVPPSEKPRGRASTESG---GGPPVESRAPAATFEPHSSNLGLKITQTFAAASWPWAPKSSTEARAXXXXXXXXXXXXXXXXSGSSTAVGAGDSAGARGGXXXXXXXXXXXXXXXXXXXXXXXXGSGDSCGSDARDGESAAATAGSAAVDXXXXXXXXXXXXXXXXXYSAFVGAFEGVICS---MGSSGGARDGQTVVPSLVLDEDXXXXXXXXXXXXXXGQLPSDT--VTDVCGLDGGRPLAARWGGSGEVGGEVAAGGRAVP-------------------------RRSVGALVCRRCGGTAEGPQNSTCTCSVPELGTGGAEPLDRDETQATAGLSKLKGVFKSFNGGVQVARQMLDTAVRQNVAHNV 1054          
BLAST of mRNA_H-paniculata_contig4709.11720.1 vs. uniprot
Match: D8LCP7_ECTSI (PH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCP7_ECTSI)

HSP 1 Score: 74.7 bits (182), Expect = 7.410e-10
Identity = 42/55 (76.36%), Postives = 50/55 (90.91%), Query Frame = 0
Query:    1 MAGERRAALAKVAELGEQKRILIREVKAARSSLADASAVNRRLARAYESLDRSLR 55
            MAGERRAA AK AEL EQKR+L+REVK +R SLA+A++VNRRLARAYESL++SLR
Sbjct:  434 MAGERRAAAAKAAELSEQKRLLVREVKLSRRSLAEATSVNRRLARAYESLEQSLR 488          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4709.11720.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JHM0_9PHAE3.000e-2640.42PH domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D8LCP7_ECTSI7.410e-1076.36PH domain-containing protein n=1 Tax=Ectocarpus si... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4709contigH-paniculata_contig4709:10483..15087 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4709.11720.1mRNA_H-paniculata_contig4709.11720.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4709 9486..15138 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4709.11720.1 ID=prot_H-paniculata_contig4709.11720.1|Name=mRNA_H-paniculata_contig4709.11720.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=974bp
MAGERRAALAKVAELGEQKRILIREVKAARSSLADASAVNRRLARAYESL
DRSLRAAAAASLSTEALTSPNTTSAAASVGSSSSSSIRTAAAAVDEPPDD
SYRSTAVETAPAVEGLHLAAAANPTAAAAARPAAAGRRHGDSAGLPFPGR
LTRPSSPGGSSVGSSSAAGDAPAAATAAVVAVAAEWRQVRVASCATREKR
RRNSSSADSFGEAGGGAGGRGRGGVESGGCGVGGGDIEGVRSVAATGGVQ
VRNLSTGDVDVVVPGGGARARAATEGDALLGSKKVRGWAGLKEKARVKLF
LKITQGFTSASWPWVGSGASGGGPKSSNSDANEPAITTTTTTTISTAPAT
TNNKSRRSSITDGSTSSATAIAGVSIPTVAAKNSISTSSNNMGNSICHHH
HHHPVPSISLSDLEGADSELEIDGSGGGGGGHDAGDIADALITPAFSTSA
GSRSHEGEVMAEVGRGGSGEEDEVGMAAAAAAATAAVVEERDGGHRRVSV
GALLCRRCGGTVEGPLHSTCSCTVPQLQEGLGPEASAAPSATAGMLKLKG
VFKTFNGRVEVARQMLDSAIRQNMSNNMGRPDPSLEPLVPSTGGTAKPVS
VPSSTVPANTTFLASAAETEYETAAAATIAAAAVAPAVMVTLPEKDANCV
GRSLEEEAETELCVEAENTTAIPRGFVENKEGEVRGVQTAPLFGVPLVAS
TAPLPTAAAAAGSLVDDGGPMCYDHSESAAVIEPAVVEAIAVAVGDGGDG
IAEDGHDDEDGLVVSHEHGGGARVEDYHDEGASTMEDAVDEAGIGENGHG
GDGVVEDDDHCEASIEDDDDIVAVRDNGHGEEAVRACDDIAIAAEGTATT
KCETLAAGAGEAAVAPDNTLSIDKAFAAVPKEADAPGMGTATSDVETNSD
TDSIGDFTGSADVNKVTIGTATCDTETDNDKEIPLAATVADAAAPVGGDD
GSSDSCSVEEGVSEGRYGGEERR*
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