prot_H-paniculata_contig470.11704.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig470.11704.1
Unique Nameprot_H-paniculata_contig470.11704.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length60
Homology
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BLAST of mRNA_H-paniculata_contig470.11704.1 vs. uniprot
Match: A0A6H5KTT4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTT4_9PHAE)

HSP 1 Score: 87.8 bits (216), Expect = 7.990e-19
Identity = 39/59 (66.10%), Postives = 48/59 (81.36%), Query Frame = 0 
Query:    2 QDWHATLAIYFDRCQTWLLKTSRVPVANSILKSPKLSFRLGRIDGKSEAYTTASRAGKG 60
            QDW+ATL IYFDRCQTWLLK +RVPV NS+LK+  L+FRL R+DGK EA+  A+ +G G
Sbjct:  162 QDWNATLTIYFDRCQTWLLKVARVPVGNSVLKNSALNFRLNRLDGKREAFGGAAASGGG 220
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BLAST of mRNA_H-paniculata_contig470.11704.1 vs. uniprot
Match: D7G7T7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7T7_ECTSI)

HSP 1 Score: 82.4 bits (202), Expect = 5.460e-17
Identity = 36/50 (72.00%), Postives = 42/50 (84.00%), Query Frame = 0 
Query:    2 QDWHATLAIYFDRCQTWLLKTSRVPVANSILKSPKLSFRLGRIDGKSEAY 51
            QDW+ATL IYFDRCQTWLLK +RVPV NS+LK+  L+FRL R DGK EA+
Sbjct:  163 QDWNATLTIYFDRCQTWLLKAARVPVGNSVLKNSALNFRLNRRDGKREAF 212
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig470.11704.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KTT4_9PHAE7.990e-1966.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G7T7_ECTSI5.460e-1772.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig470contigH-paniculata_contig470:12942..13121 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig470.11704.1mRNA_H-paniculata_contig470.11704.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig470 12924..13121 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig470.11704.1 ID=prot_H-paniculata_contig470.11704.1|Name=mRNA_H-paniculata_contig470.11704.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=60bp
MQDWHATLAIYFDRCQTWLLKTSRVPVANSILKSPKLSFRLGRIDGKSEA
YTTASRAGKG
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