prot_H-paniculata_contig47.11700.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig47.11700.1
Unique Nameprot_H-paniculata_contig47.11700.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length171
Homology
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BLAST of mRNA_H-paniculata_contig47.11700.1 vs. uniprot
Match: A0A6H5JQC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQC7_9PHAE)

HSP 1 Score: 144 bits (362), Expect = 1.330e-36
Identity = 91/172 (52.91%), Postives = 107/172 (62.21%), Query Frame = 0 
Query:   21 VVSFAGNPGTGKACLAADVVARKDVRAKFEERVLWLQVGRSAGNDLPEFLRRVAHAYHKVVLCEHLKDPPPLPPVDRFR-PANAV-----------------VPSAAEATAPAAL---GETDDEVQEEARAVAKAEETEAAAKAAQAWFTPYVSYLGLRCLAVLEDVWEADV 171
            VV+FAG+ G GKACLAA+VV R+DVRAKF + VLWLQVG S G DL   L R+AHAYH+VVLC+ L++PPPLPP+ RFR P NA                  V S   AT  AA    G   D+       +    + EA A AA  WFTPY+S LGLRCL VLEDVWEA+V
Sbjct:  518 VVTFAGSSGAGKACLAAEVVGRRDVRAKFGDSVLWLQVGLSGGKDLACLLHRLAHAYHRVVLCKRLRNPPPLPPIGRFRGPRNAEAAAXXXXXXXXXXXXCGVFSTMNATFKAAYNFRGIRCDDPLFPTFCLGLLLKAEATATAAATWFTPYMSGLGLRCLVVLEDVWEAEV 689
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BLAST of mRNA_H-paniculata_contig47.11700.1 vs. uniprot
Match: D8LCK2_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCK2_ECTSI)

HSP 1 Score: 134 bits (337), Expect = 2.870e-33
Identity = 82/158 (51.90%), Postives = 96/158 (60.76%), Query Frame = 0 
Query:   21 VVSFAGNPGTGKACLAADVVARKDVRAKFEERVLWLQVGRSAGNDLPEFLRRVAHAYHKVVLCEHLKDPPPLPPVDRFR-PANAVVPSAAEATAPAALGETDDEVQEEARAVAKAEETEAAAKA------AQAWFTPYVSYLGLRCLAVLEDVWEADV 171
            VV+FAG+ G GKACLAA+VV R+DVRAKF + VLWLQVGRS G DL   L R+AHAYH+VVLC+ L++PPPLPP+ RFR P N    +AAE                                       A  WFTPY+S LGLRCL VLEDVWEA+V
Sbjct:  618 VVTFAGSSGAGKACLAAEVVGRRDVRAKFGDSVLWLQVGRSGGTDLACLLHRLAHAYHRVVLCKRLRNPPPLPPISRFRGPRNGE--AAAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATWFTPYMSGLGLRCLVVLEDVWEAEV 773
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig47.11700.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JQC7_9PHAE1.330e-3652.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCK2_ECTSI2.870e-3351.90Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 117..137

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig47contigH-paniculata_contig47:41641..44061 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig47.11700.1mRNA_H-paniculata_contig47.11700.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig47 41641..44061 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig47.11700.1 ID=prot_H-paniculata_contig47.11700.1|Name=mRNA_H-paniculata_contig47.11700.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=171bp
RSGHGEGGDEENASAMNASAVVSFAGNPGTGKACLAADVVARKDVRAKFE
ERVLWLQVGRSAGNDLPEFLRRVAHAYHKVVLCEHLKDPPPLPPVDRFRP
ANAVVPSAAEATAPAALGETDDEVQEEARAVAKAEETEAAAKAAQAWFTP
YVSYLGLRCLAVLEDVWEADV
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