prot_H-paniculata_contig47.11699.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig47.11699.1
Unique Nameprot_H-paniculata_contig47.11699.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length726
Homology
BLAST of mRNA_H-paniculata_contig47.11699.1 vs. uniprot
Match: A0A6H5JQC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQC7_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 2.820e-16
Identity = 133/394 (33.76%), Postives = 171/394 (43.40%), Query Frame = 0
Query:  248 PAVAALQVLIYAVGVARTNRRRLESLAELCQAAVAVLIRVCQPQPLDSPTVGTLSRDSSLKFSPALAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAF------PLPRALRLLAEALSSEIVIAARVAEACSPRGILRAIAIALAVEAAEPLQSARGGGG-------DGERAAEGRAGCVGD-------------------------SLKEERETALLAAAERIRYIARRVEGSGRGNTPSSGGGTKEKDKRKGQGGRGRTAPSHGGDVESAGESENPLFSESAGGKGWSKSGGGGHGEDDRADGEGRGAVDARAEAFRKELVARTHQCGGLKALAVNWDGVARLKEAFVAWVDEPYGGQQQQPQAPLDLRVELLRLSSLVEAI 603
            PAVAALQ L+ AV  AR  RR+L++L+E+C +AVA LI  CQ                          XXXXXXXX  XXX XX                      A       P+ R LR  AE L +E+V    +AEACSPRGIL ++A+A         +   G GG       DG+ A  G+ G   +                         SL++E+     AAAER+R I  R+E S    +P++    +              AP HGGDV          F  +A    W        GE +R D EG        EAFR E V    + GGLKAL ++W GVARL+EAF+AWV E  G          DL+ E+LR+SS  EA+
Sbjct:   40 PAVAALQGLLAAVRAARACRRQLDALSEICDSAVATLIEACQSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNXXXSXXVGDIHGSGNGSDTGAASLVAVAAGAAPAQPPVSRNLRAAAELLGAEVVGITALAEACSPRGILESLALA---SRRYVSKGKHGEGGHRXXXRHDGD-AGGGKPGVGAEEEMKEGAXXXXXXXXXXXXXPVTVVSLRKEKAAKFRAAAERVRLIVGRLEVSRDVTSPAAAAAAEVGV---------AAAPVHGGDV---------SFFPAARAV-WEDEXXXXXGEAERDD-EG-------VEAFRSEFVESVEEAGGLKALTLSWTGVARLEEAFLAWVVEAGGN------TGTDLKAEILRVSSRAEAL 396          
BLAST of mRNA_H-paniculata_contig47.11699.1 vs. uniprot
Match: D8LCK2_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCK2_ECTSI)

HSP 1 Score: 88.2 bits (217), Expect = 3.070e-14
Identity = 136/393 (34.61%), Postives = 171/393 (43.51%), Query Frame = 0
Query:  246 AKPAVAALQVLIYAVGVARTNRRRLESLAELCQAAVAVLIRVCQPQPLDSPTVGTLSRDSSLKFSPALAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAF--------PLPRALRLLAEALSSEIVIAARVAEACSPRGILRAIAIALA--VEAAEPLQSA--RGGGGDGERAAEGRAGCVGD-----------------------SLKEERETALLAAAERIRYIARRVEGSGRGNTPSSGGGTKEKDKRKGQGGRGRTAPSHGGDVESAGESENPLFSESAGGKGWSKSGGGGHGEDDRADGEGRGAVDARAEAFRKELVARTHQCGGLKALAVNWDGVARLKEAFVAWVDEPYGGQQQQPQAPLDLRVELLRLSSLVEAI 603
            A PAVAALQ L+ AV  AR  RR+L++L+E+C +AVA+LI  CQ                          XXXXXXXXXXX                 XXXXXXXXXX          P+ R LR  AE L +E+V    +AEACSPRGIL ++A+A    V   +P +    RGG  DG+ A  G  G   +                       SL++E+     A AER+R I  R+E S    +P                      P HGGDV                                 A+ E  G      EAFR E V    + GGLKAL ++W GVARL+EAF+AWV E  G          DL+ E+LR+SSL EA+
Sbjct:  214 AAPAVAALQGLLAAVRAARACRRQLDALSEICDSAVAMLIETCQSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGVVGDIHGSGNGSDTGXXXXXXXXXXXXXXXXPSQPPVSRNLRAAAELLGAEVVGITALAEACSPRGILESLALATRRDVSKRKPGEGGHRRGGRHDGD-AGGGEPGVGAEXXXXXXXXXXXXXXXXXTPVAVVSLRKEKAAKFRATAERVRLIVGRLEVSRDVTSPXXXXXXXXXXXXXXX----XXXPVHGGDVSFFXXXXXXXXXXXXX-------------XXXEAEREDEGV-----EAFRSEFVESVEEAGGLKALTLSWTGVARLEEAFLAWVVEAGGN------TGTDLKAEILRVSSLAEAL 577          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig47.11699.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JQC7_9PHAE2.820e-1633.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCK2_ECTSI3.070e-1434.61Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 170..201
NoneNo IPR availableGENE3D1.20.920.60coord: 162..274
e-value: 7.1E-6
score: 27.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig47contigH-paniculata_contig47:28188..41604 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig47.11699.1mRNA_H-paniculata_contig47.11699.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig47 28188..41605 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig47.11699.1 ID=prot_H-paniculata_contig47.11699.1|Name=mRNA_H-paniculata_contig47.11699.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=726bp
AFRNIISGPTHRQSRSLTFLGGTGKNRNRMGCCSSRYVDGAQGGTRYGLG
KVNKRSSSRDNVVPQPQQFEDGEGNNEQDHNDRTNDDRNINEETTSRSEE
KPQVASEHLHHEAVVVARKSSESSHHVHQPSQDAVVRSSSRRSVHESPAE
AQSKESGESVSHDGGNAGDVGQEQQEQEQEQQQQQQQQQQHQEQQEQQEQ
EAHGVDHSEVVTEEGSGVNGAQAALSGLRPSSITSLSALGHPPSTAKPAV
AALQVLIYAVGVARTNRRRLESLAELCQAAVAVLIRVCQPQPLDSPTVGT
LSRDSSLKFSPALAAAAREAAVAAAGNSGGRSGGEDHSSLVKAAAAEAAA
AAAAFPLPRALRLLAEALSSEIVIAARVAEACSPRGILRAIAIALAVEAA
EPLQSARGGGGDGERAAEGRAGCVGDSLKEERETALLAAAERIRYIARRV
EGSGRGNTPSSGGGTKEKDKRKGQGGRGRTAPSHGGDVESAGESENPLFS
ESAGGKGWSKSGGGGHGEDDRADGEGRGAVDARAEAFRKELVARTHQCGG
LKALAVNWDGVARLKEAFVAWVDEPYGGQQQQPQAPLDLRVELLRLSSLV
EAIKLPEPAQPAPPYVSPAGSPEMAPQLNSAMLANRTDMPRTMSSNNNRV
VSPLGSSASITLVGLGNRSSSNTPRITTAIPGGRGGLLPATASLPPLPPV
GAPLRPRYYVSRDRFSSAAAAALIRG
back to top