mRNA_H-paniculata_contig46982.11694.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig46982.11694.1
Unique NamemRNA_H-paniculata_contig46982.11694.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig46982.11694.1 vs. uniprot
Match: A0A6H5L4N4_9PHAE (RNA cytidine acetyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4N4_9PHAE)

HSP 1 Score: 130 bits (328), Expect = 8.670e-34
Identity = 64/68 (94.12%), Postives = 67/68 (98.53%), Query Frame = 1 
Query:    1 RWCYYKETERVLGQTFGVLVLQDFEALTPNLLARTIETIEGGGLVILLLKTVSSLKQLYTMSMDVHSR 204
            RWCYYK+TERVLGQTFGVLVLQDFEALTPNLLARTIET+EGGGLVILLLKTV+SLKQLY MSMDVHSR
Sbjct:   33 RWCYYKDTERVLGQTFGVLVLQDFEALTPNLLARTIETVEGGGLVILLLKTVTSLKQLYAMSMDVHSR 100
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BLAST of mRNA_H-paniculata_contig46982.11694.1 vs. uniprot
Match: A0A482SCH0_9ARCH (tRNA(Met) cytidine acetyltransferase (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SCH0_9ARCH)

HSP 1 Score: 118 bits (296), Expect = 1.070e-31
Identity = 55/68 (80.88%), Postives = 64/68 (94.12%), Query Frame = 1 
Query:    1 RWCYYKETERVLGQTFGVLVLQDFEALTPNLLARTIETIEGGGLVILLLKTVSSLKQLYTMSMDVHSR 204
            RW YYKETE +LGQTFG+ VLQDFEA+TPN+LARTIET+EGGG+VI+LLKTV SLKQLYTM+MDVH+R
Sbjct:  103 RWTYYKETENILGQTFGMCVLQDFEAITPNVLARTIETVEGGGIVIILLKTVKSLKQLYTMTMDVHNR 170
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BLAST of mRNA_H-paniculata_contig46982.11694.1 vs. uniprot
Match: A0A7I4XRR9_HAECO (DUF1726 domain-containing protein n=1 Tax=Haemonchus contortus TaxID=6289 RepID=A0A7I4XRR9_HAECO)

HSP 1 Score: 114 bits (285), Expect = 1.200e-31
Identity = 52/68 (76.47%), Postives = 65/68 (95.59%), Query Frame = 1 
Query:    1 RWCYYKETERVLGQTFGVLVLQDFEALTPNLLARTIETIEGGGLVILLLKTVSSLKQLYTMSMDVHSR 204
            R+CYY ET+ +LG T+G+LVLQDFEALTPNLLARTIETIEGGG+V+LL+KTV+SL+QLYT++MDVH+R
Sbjct:    5 RYCYYNETQNILGNTYGMLVLQDFEALTPNLLARTIETIEGGGIVVLLMKTVNSLRQLYTIAMDVHNR 72
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BLAST of mRNA_H-paniculata_contig46982.11694.1 vs. uniprot
Match: A0A183E3W3_9BILA (DUF1726 domain-containing protein n=1 Tax=Gongylonema pulchrum TaxID=637853 RepID=A0A183E3W3_9BILA)

HSP 1 Score: 116 bits (290), Expect = 2.490e-31
Identity = 53/68 (77.94%), Postives = 64/68 (94.12%), Query Frame = 1 
Query:    1 RWCYYKETERVLGQTFGVLVLQDFEALTPNLLARTIETIEGGGLVILLLKTVSSLKQLYTMSMDVHSR 204
            R+CYY ET ++LG TFG+LVLQDFEA+TPNLLART+ETIEGGG+++LLLK+V SLKQLYTM+MDVHSR
Sbjct:   51 RYCYYNETHKILGNTFGMLVLQDFEAITPNLLARTVETIEGGGVIVLLLKSVGSLKQLYTMTMDVHSR 118
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BLAST of mRNA_H-paniculata_contig46982.11694.1 vs. uniprot
Match: UPI001C346313 ((large yellow croaker) hypothetical protein n=1 Tax=Larimichthys crocea TaxID=215358 RepID=UPI001C346313)

HSP 1 Score: 115 bits (288), Expect = 5.410e-31
Identity = 53/68 (77.94%), Postives = 64/68 (94.12%), Query Frame = 1 
Query:    1 RWCYYKETERVLGQTFGVLVLQDFEALTPNLLARTIETIEGGGLVILLLKTVSSLKQLYTMSMDVHSR 204
            R+CYY ET ++LG TFG+ VLQDFEALTPNLLARTIET+EGGG+V+LLL+T++SLKQLYTM+MDVHSR
Sbjct:  105 RYCYYNETHKILGNTFGMCVLQDFEALTPNLLARTIETVEGGGIVVLLLRTMNSLKQLYTMTMDVHSR 172
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BLAST of mRNA_H-paniculata_contig46982.11694.1 vs. uniprot
Match: A0A7S1RT69_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1RT69_ALECA)

HSP 1 Score: 113 bits (283), Expect = 6.130e-31
Identity = 52/68 (76.47%), Postives = 64/68 (94.12%), Query Frame = 1 
Query:    1 RWCYYKETERVLGQTFGVLVLQDFEALTPNLLARTIETIEGGGLVILLLKTVSSLKQLYTMSMDVHSR 204
            R+CYYKETE+VLG+TFG+ +LQDFEALTPNLL RTIET+EGGG+V+LLLKT+SSLKQLY +SMD H++
Sbjct:   57 RYCYYKETEQVLGKTFGMCILQDFEALTPNLLCRTIETVEGGGMVVLLLKTMSSLKQLYELSMDAHAQ 124
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BLAST of mRNA_H-paniculata_contig46982.11694.1 vs. uniprot
Match: A0A7S1ZBT3_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZBT3_TRICV)

HSP 1 Score: 112 bits (281), Expect = 1.600e-30
Identity = 52/67 (77.61%), Postives = 62/67 (92.54%), Query Frame = 1 
Query:    4 WCYYKETERVLGQTFGVLVLQDFEALTPNLLARTIETIEGGGLVILLLKTVSSLKQLYTMSMDVHSR 204
            WCYY++T RVLG T GVLVLQDFEALTPNL+ARTIET+EGGGLVI L++TV+SL+QLY M+MDVH+R
Sbjct:   26 WCYYRDTHRVLGSTCGVLVLQDFEALTPNLMARTIETVEGGGLVIFLMRTVTSLRQLYCMTMDVHAR 92
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BLAST of mRNA_H-paniculata_contig46982.11694.1 vs. uniprot
Match: K8YNR7_NANGC (RNA cytidine acetyltransferase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YNR7_NANGC)

HSP 1 Score: 121 bits (303), Expect = 2.050e-30
Identity = 55/68 (80.88%), Postives = 66/68 (97.06%), Query Frame = 1 
Query:    1 RWCYYKETERVLGQTFGVLVLQDFEALTPNLLARTIETIEGGGLVILLLKTVSSLKQLYTMSMDVHSR 204
            RWCYYKET R+LGQTFG+ VLQDFEALTPNLLART+ET+EGGGLV+LLL++V+SL+QLYTM+MDVH+R
Sbjct:   31 RWCYYKETHRILGQTFGMCVLQDFEALTPNLLARTVETVEGGGLVVLLLQSVTSLRQLYTMAMDVHAR 98
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BLAST of mRNA_H-paniculata_contig46982.11694.1 vs. uniprot
Match: A0A2I0TDS5_LIMLA (DUF1726 domain-containing protein n=1 Tax=Limosa lapponica baueri TaxID=1758121 RepID=A0A2I0TDS5_LIMLA)

HSP 1 Score: 114 bits (285), Expect = 2.280e-30
Identity = 51/68 (75.00%), Postives = 64/68 (94.12%), Query Frame = 1 
Query:    1 RWCYYKETERVLGQTFGVLVLQDFEALTPNLLARTIETIEGGGLVILLLKTVSSLKQLYTMSMDVHSR 204
            R+CYY ET ++LG TFG+ VLQDFEALTPNLLART+ET+EGGG+V++LL+T++SLKQLYTM+MDVHSR
Sbjct:   31 RYCYYNETHKILGNTFGMCVLQDFEALTPNLLARTVETVEGGGIVVILLRTMNSLKQLYTMTMDVHSR 98
[Close]
BLAST of mRNA_H-paniculata_contig46982.11694.1 vs. uniprot
Match: A0A3Q2ZUE5_KRYMA (N-acetyltransferase 10 n=1 Tax=Kryptolebias marmoratus TaxID=37003 RepID=A0A3Q2ZUE5_KRYMA)

HSP 1 Score: 116 bits (290), Expect = 2.710e-30
Identity = 54/68 (79.41%), Postives = 64/68 (94.12%), Query Frame = 1 
Query:    1 RWCYYKETERVLGQTFGVLVLQDFEALTPNLLARTIETIEGGGLVILLLKTVSSLKQLYTMSMDVHSR 204
            R+CYY ET ++LG TFG+ VLQDFEALTPNLLARTIET+EGGGLV+LLL+T++SLKQLYTM+MDVHSR
Sbjct:  105 RYCYYNETHKILGNTFGMCVLQDFEALTPNLLARTIETVEGGGLVVLLLRTMNSLKQLYTMTMDVHSR 172
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig46982.11694.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4N4_9PHAE8.670e-3494.12RNA cytidine acetyltransferase n=2 Tax=Ectocarpus ... [more]
A0A482SCH0_9ARCH1.070e-3180.88tRNA(Met) cytidine acetyltransferase (Fragment) n=... [more]
A0A7I4XRR9_HAECO1.200e-3176.47DUF1726 domain-containing protein n=1 Tax=Haemonch... [more]
A0A183E3W3_9BILA2.490e-3177.94DUF1726 domain-containing protein n=1 Tax=Gongylon... [more]
UPI001C3463135.410e-3177.94(large yellow croaker) hypothetical protein n=1 Ta... [more]
A0A7S1RT69_ALECA6.130e-3176.47Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A7S1ZBT3_TRICV1.600e-3077.61Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
K8YNR7_NANGC2.050e-3080.88RNA cytidine acetyltransferase n=3 Tax=Monodopsida... [more]
A0A2I0TDS5_LIMLA2.280e-3075.00DUF1726 domain-containing protein n=1 Tax=Limosa l... [more]
A0A3Q2ZUE5_KRYMA2.710e-3079.41N-acetyltransferase 10 n=1 Tax=Kryptolebias marmor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig46982contigH-paniculata_contig46982:629..835 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score131.0
Seed ortholog evalue2.2e-28
Seed eggNOG ortholog2880.D7FZ70
Preferred nameNAT10
KEGG koko:K14521
KEGG Pathwayko03008,map03008
Hectar predicted targeting categoryother localisation
GOsGO:0000049,GO:0000154,GO:0000166,GO:0002097,GO:0002101,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005697,GO:0005730,GO:0006139,GO:0006325,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006464,GO:0006473,GO:0006475,GO:0006725,GO:0006807,GO:0006996,GO:0008033,GO:0008080,GO:0008144,GO:0008150,GO:0008152,GO:0009451,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010556,GO:0010558,GO:0010605,GO:0010639,GO:0016043,GO:0016070,GO:0016072,GO:0016407,GO:0016410,GO:0016569,GO:0016570,GO:0016573,GO:0016740,GO:0016746,GO:0016747,GO:0017076,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019219,GO:0019222,GO:0019538,GO:0019899,GO:0022613,GO:0030490,GO:0030496,GO:0030554,GO:0030684,GO:0030686,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0032204,GO:0032205,GO:0032210,GO:0032211,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033043,GO:0033044,GO:0034470,GO:0034641,GO:0034660,GO:0035639,GO:0036094,GO:0036211,GO:0042254,GO:0042274,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043543,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045934,GO:0046483,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051052,GO:0051053,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051276,GO:0051391,GO:0051392,GO:0060255,GO:0065007,GO:0065008,GO:0070013,GO:0070182,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1904356,GO:1904357,GO:1904812,GO:1990882,GO:1990883,GO:1990884,GO:1990904,GO:2000112,GO:2000113,GO:2000278,GO:2000279,GO:2001251
EggNOG free text desc.tRNA N-acetyltransferase activity
EggNOG OGsCOG1444@1,KOG2036@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03009
Exons1
Model size207
Cds size207
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930398.3288743-CDS-H-paniculata_contig46982:628..8351622930398.3288743-CDS-H-paniculata_contig46982:628..835Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig46982 629..835 +
1691481273.487139-CDS-H-paniculata_contig46982:628..8351691481273.487139-CDS-H-paniculata_contig46982:628..835Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig46982 629..835 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig46982.11694.1prot_H-paniculata_contig46982.11694.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig46982 629..835 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig46982.11694.1

>prot_H-paniculata_contig46982.11694.1 ID=prot_H-paniculata_contig46982.11694.1|Name=mRNA_H-paniculata_contig46982.11694.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=69bp
RWCYYKETERVLGQTFGVLVLQDFEALTPNLLARTIETIEGGGLVILLLK
TVSSLKQLYTMSMDVHSR*
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mRNA from alignment at H-paniculata_contig46982:629..835+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig46982.11694.1 ID=mRNA_H-paniculata_contig46982.11694.1|Name=mRNA_H-paniculata_contig46982.11694.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=207bp|location=Sequence derived from alignment at H-paniculata_contig46982:629..835+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGGTGGTGCTACTACAAGGAGACAGAGCGCGTCCTGGGTCAGACGTTCGG
AGTGCTTGTCCTCCAAGACTTCGAAGCCCTCACGCCCAACCTGTTGGCCC
GCACCATCGAGACGATAGAGGGCGGCGGACTGGTGATTTTGCTCCTCAAG
ACCGTGTCGAGCCTCAAGCAGCTCTACACCATGTCTATGGACGTACACTC
CAGGTGA
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Coding sequence (CDS) from alignment at H-paniculata_contig46982:629..835+

>mRNA_H-paniculata_contig46982.11694.1 ID=mRNA_H-paniculata_contig46982.11694.1|Name=mRNA_H-paniculata_contig46982.11694.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=414bp|location=Sequence derived from alignment at H-paniculata_contig46982:629..835+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGGTGGTGCTACTACAAGGAGACAGAGCGCGTCCTGGGTCAGACGTTCGG
AGTGCTTGTCCTCCAAGACTTCGAAGCCCTCACGCCCAACCTGTTGGCCC
GCACCATCGAGACGATAGAGGGCGGCGGACTGGTGATTTTGCTCCTCAAG
ACCGTGTCGAGCCTCAAGCAGCTCTACACCATGTCTATGGACGTACACTC
CAGGTGAAGGTGGTGCTACTACAAGGAGACAGAGCGCGTCCTGGGTCAGA
CGTTCGGAGTGCTTGTCCTCCAAGACTTCGAAGCCCTCACGCCCAACCTG
TTGGCCCGCACCATCGAGACGATAGAGGGCGGCGGACTGGTGATTTTGCT
CCTCAAGACCGTGTCGAGCCTCAAGCAGCTCTACACCATGTCTATGGACG
TACACTCCAGGTGA
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