mRNA_H-paniculata_contig46961.11689.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig46961.11689.1
Unique NamemRNA_H-paniculata_contig46961.11689.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig46961.11689.1 vs. uniprot
Match: D7FVF3_ECTSI (GBF1, ArfGEF protein of the BIG/GBF subfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVF3_ECTSI)

HSP 1 Score: 256 bits (655), Expect = 8.730e-75
Identity = 174/351 (49.57%), Postives = 195/351 (55.56%), Query Frame = 1
Query:    1 LAQLLELSALCLRCEVGELLNDESCWDIFLACYNLYHVTTDDRASGLLRDTAGNTLAHVVLMLFSCERVSRARSAASTXXXXXXXXXXTGDGA---DVVGKE--------------RQPALVGAN--------------------GSSCDAG-----SSGNQL-------------SSVEHEALATADAGSNNDTE----------------------------------------------------VEVEGVLVNVMRFLSRLSDPRSNRSAECVLGLSLINIALEAGGADLGRIPALVRVMRGDLCKHLLQNSQTHDLDVLSLTLRVVFNLFNSIKDHLKVQLEVFLT 732
            L +LLELSALCLRCEVG+LL DESCW+IF+ACYNLYH+TTDD++ GLLRDTAGNTLAH+VLMLFS  RVSRA  +A+              GA   + +G++              + P   G +                    GSS  AG     SSG Q                 E E   + D G+N+D                                                       E EGVLV +MRFLS LSDPRSN SAECVL LSLINIALEAGGADLGRIP+LVRVMRGDLCKHLLQNSQT DLDVLSLTLRVVFNLFNSIKDHLKVQLEVFLT
Sbjct:  142 LMKLLELSALCLRCEVGDLLTDESCWNIFVACYNLYHITTDDKSFGLLRDTAGNTLAHIVLMLFSRPRVSRASKSAAPGGAATADATVAAGGAVLHETLGQKAGAEARDCPPTEPSKAPPTPGGDRDGLAQASPXXXXXXGLWRHGSSSKAGDEEGSSSGKQTPFGRGRGVPPPLEGGQEEEPWPSLD-GANDDGASQGVDDGVVVAGRGALKAMMGPGNGRFGLGGVGGPVSPVQPTKHGGGRDSGTAEQEGVLVKLMRFLSLLSDPRSNGSAECVLSLSLINIALEAGGADLGRIPSLVRVMRGDLCKHLLQNSQTDDLDVLSLTLRVVFNLFNSIKDHLKVQLEVFLT 491          
BLAST of mRNA_H-paniculata_contig46961.11689.1 vs. uniprot
Match: A0A6H5JJL6_9PHAE (SEC7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJL6_9PHAE)

HSP 1 Score: 254 bits (650), Expect = 4.100e-74
Identity = 168/354 (47.46%), Postives = 186/354 (52.54%), Query Frame = 1
Query:    1 LAQLLELSALCLRCEVGELLNDESCWDIFLACYNLYHVTTDDRASGLLRDTAGNTLAHVVLMLFSCERVSRA-RSAASTXXXXXXXXXXTG-------------------------------------------------------------------------------------------------------------DGADVVGKERQPALVGANGSSCDAGSSGNQLSSVEHEALATADAGSNNDTEVEVEGVLVNVMRFLSRLSDPRSNRSAECVLGLSLINIALEAGGADLGRIPALVRVMRGDLCKHLLQNSQTHDLDVLSLTLRVVFNLFNSIKDHLKVQLEVFLT 732
            L +LLELSALCLRCEVG+LL DESCW+IF+ACYNLYH+TT+D++ GLLRDTAGNTLAH+VLMLFS  RVSRA +SAA             G                                                                                                             DG  V G+    A++G        G  G  +S V+     T   G  +    E EGVLV +MRFLS LSDPRSN SAECVL LSLINIALEAGGADLGRIP+LVRVMRGDLCKHLLQNSQT DLDVLSLTLRVVFNLFNSIKDHLKVQLEVFLT
Sbjct:  142 LMKLLELSALCLRCEVGDLLTDESCWNIFVACYNLYHITTNDKSFGLLRDTAGNTLAHIVLMLFSHPRVSRASKSAAPGGALRADATVAAGKAVLHETQGQKAGEEPRDFPPMDQSKAPPTPGGDGDGLAQGSPPSPAAAGLWRHGSSKAGDEEGSSSGGKQTPFGRGGGVPPPLEGGQEEEPWPSLDGANDDGASQGVDDGIVVAGRGALKAMMGPGNGRFGLGGVGGPVSPVQ----PTKHGGGRDSDAAEQEGVLVKLMRFLSLLSDPRSNGSAECVLSLSLINIALEAGGADLGRIPSLVRVMRGDLCKHLLQNSQTDDLDVLSLTLRVVFNLFNSIKDHLKVQLEVFLT 491          
BLAST of mRNA_H-paniculata_contig46961.11689.1 vs. uniprot
Match: A0A836CJX6_9STRA (Sec7 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJX6_9STRA)

HSP 1 Score: 162 bits (411), Expect = 4.570e-42
Identity = 127/350 (36.29%), Postives = 156/350 (44.57%), Query Frame = 1
Query:    1 LAQLLELSALCLRCEVGELLNDESCWDIFLACYNLYHVTTDDRASGLLRDTAGNTLAHVVLMLFSCERVSRARSAASTXXXXXXXXXXTGDGADVVGKERQPALVGANGSSCDAGSSGNQLSSVEHEA-------------------------------LATADAGSNNDTEVEVEGVLVNVMRFLSRLSDPRSNRSAECVLGLSLINIALEAGGADLGRIPALVRVM---------------------------------------------------------------------------RGDLCKHLLQNSQTHDLDVLSLTLRVVFNLFNSIKDHLKVQLEVFLT 732
            L +LLELSALCLRCEVG LL+DE CWDIF +CY    +++ +R + LL +TAGNT+AH+VL++FS  R     S  S                   GK+R     G+      A          EHE                                   + AG   + ++ V   LV +MRFLSRLS+PR N    C+L LSLINIALEAGG+ LG+  ALV VM                                                                           +GDLCKHLL  SQT +L++LSLTLRVVFNLFNSIKDHLKVQLEVF+T
Sbjct:  143 LMKLLELSALCLRCEVGRLLSDERCWDIFQSCYG---ISSQERVTSLLGNTAGNTIAHIVLIVFSRPRPPPQLSPRSKAK---------------AGKQRAVKAAGS-----PAXXXXXXXXXXEHEGEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQSPAGEGGEQQLNV---LVEIMRFLSRLSNPRENSEDTCILCLSLINIALEAGGSQLGQQQALVEVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTLGALMVGAGLLLQHQMQQLARFGDAITLLSPYSVVMQGDLCKHLLHCSQTEELNILSLTLRVVFNLFNSIKDHLKVQLEVFIT 466          
BLAST of mRNA_H-paniculata_contig46961.11689.1 vs. uniprot
Match: K3X1M9_GLOUD (SEC7 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X1M9_GLOUD)

HSP 1 Score: 145 bits (365), Expect = 6.470e-36
Identity = 100/244 (40.98%), Postives = 129/244 (52.87%), Query Frame = 1
Query:    1 LAQLLELSALCLRCEVGELLNDESCWDIFLACYNLYHVTTDDRASGLLRDTAGNTLAHVVLMLFSCERVSRARSAASTXXXXXXXXXXTGDGADVVGKERQPALVGANGSSCDAGSSGNQLSSVEHEALATADAGSNNDTEVEVEGVLVNVMRFLSRLSDPRSNRSAECVLGLSLINIALEAGGADLGRIPALVRVMRGDLCKHLLQNSQTHDLDVLSLTLRVVFNLFNSIKDHLKVQLEVFLT 732
            L +LLEL   C+RCEVG L+  E+ W +   CY+   ++   R+S  L   A NTLAH+VL +F  +R+       S            G+  D    E                     +S  +H  +A  +A   N        +L  +++FL+ L  P +N  A CVLGL LINI LE  G  LG    LV V++GDL K LLQNS+T +L +LSLTLRVVFNLFNSIKDHLKVQLEVF T
Sbjct:  136 LMKLLELVEYCVRCEVGPLITGENLWKMVQLCYS---ISVQPRSSLHLSRAAENTLAHLVLTVF--DRIDELEPKKSIATDPRNSQHNDGNEEDEEDAEHV-------------------VSEYQHRDVADKEA--RNRVGPYGIPLLEKILQFLASLISPTTNDEATCVLGLRLINIVLETAGTGLGNHLGLVSVLQGDLSKFLLQNSETDELAILSLTLRVVFNLFNSIKDHLKVQLEVFFT 353          
BLAST of mRNA_H-paniculata_contig46961.11689.1 vs. uniprot
Match: A0A0P1B547_PLAHL (Protein kinase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B547_PLAHL)

HSP 1 Score: 144 bits (363), Expect = 1.200e-35
Identity = 100/253 (39.53%), Postives = 133/253 (52.57%), Query Frame = 1
Query:    1 LAQLLELSALCLRCEVGELLNDESCWDIFLACYNLYHVTTDDRASGLLRDTAGNTLAHVVLMLFSCERVSRARSAASTXXXXXXXXXXTGDGA----DVVGKERQPALVGANGSSCDAGSSGNQLSSVEHEALATADAGSNNDTEVEVEG-----VLVNVMRFLSRLSDPRSNRSAECVLGLSLINIALEAGGADLGRIPALVRVMRGDLCKHLLQNSQTHDLDVLSLTLRVVFNLFNSIKDHLKVQLEVFLT 732
            L +LLEL   C+RC+ G L++DE+ W +   CY+   +    R+S  L  +A NTL+H+VL +F        +  +S           + D      +   KE++   +     S D           E E LA  +  S  DT   V+      +L  ++ F+S L  P  N    CVLGL LIN+ LE  G  LG    LV V++GDL K LLQNS+T +L +LSLTLRVVFNLFNSIKDHLKVQLEVF T
Sbjct:  119 LMKLLELVEYCIRCDAGHLISDENLWKMLQLCYS---IRCQPRSSMHLSRSADNTLSHLVLTVFDRINELEPKRKSSQPQLPVLLQDESNDQQKEDNEASNKEQEVLTLPVYDESLDI---------EEQETLAPVE--STPDTAKIVDKPYGIPLLERILHFISGLISPTENEEMTCVLGLRLINVVLETAGTGLGNHLCLVSVLQGDLSKFLLQNSETEELGILSLTLRVVFNLFNSIKDHLKVQLEVFFT 357          
BLAST of mRNA_H-paniculata_contig46961.11689.1 vs. uniprot
Match: A0A225WXV2_9STRA (SEC7 domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WXV2_9STRA)

HSP 1 Score: 144 bits (362), Expect = 1.630e-35
Identity = 98/246 (39.84%), Postives = 132/246 (53.66%), Query Frame = 1
Query:    1 LAQLLELSALCLRCEVGELLNDESCWDIFLACYNLYHVTTDDRASGLLRDTAGNTLAHVVLMLFSC--ERVSRARSAASTXXXXXXXXXXTGDGADVVGKERQPALVGANGSSCDAGSSGNQLSSVEHEALATADAGSNNDTEVEVEGVLVNVMRFLSRLSDPRSNRSAECVLGLSLINIALEAGGADLGRIPALVRVMRGDLCKHLLQNSQTHDLDVLSLTLRVVFNLFNSIKDHLKVQLEVFLT 732
            L +LLEL   C+RC+ G L++ E+ W +   CY+   +    R+S  L  +A NTL+H+VL +F    E   + +S+              G+  D +  E   +L             G Q+         T+D     D    +  +L  ++ F+S L  P  N  A CVLGL LIN+ LE  G  LG  P+LV V++GDL K LLQNS+T +L +LSLTLRVVFNLFNSIKDHLKVQLEVF T
Sbjct:  133 LMKLLELVEYCVRCDAGHLISGENLWKMLQLCYS---IRCQPRSSMHLCRSADNTLSHLVLTVFDRIDELEVQRKSSHPLPTSPQTSQSQNGEKRDEILLEYDESL-----------DIGEQIPPT---VEPTSDGAKAVDKPYGIP-LLERILHFISGLISPTENEEATCVLGLRLINVVLETAGTGLGNHPSLVSVLQGDLSKFLLQNSETEELGILSLTLRVVFNLFNSIKDHLKVQLEVFFT 360          
BLAST of mRNA_H-paniculata_contig46961.11689.1 vs. uniprot
Match: A0A5D6YY45_9STRA (SEC7 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YY45_9STRA)

HSP 1 Score: 142 bits (358), Expect = 5.640e-35
Identity = 102/245 (41.63%), Postives = 131/245 (53.47%), Query Frame = 1
Query:    1 LAQLLELSALCLRCEVGELLNDESCWDIFLACYNLYHVTTDDRASGLLRDTAGNTLAHVVLMLFS-CERVSRARSAASTXXXXXXXXXXTGDGADVVGKERQPALVGANGSSCDAGSSGNQLSSVEHEALATADAGSNNDTEVEVEGVLVNVMRFLSRLSDPRSNRSAECVLGLSLINIALEAGGADLGRIPALVRVMRGDLCKHLLQNSQTHDLDVLSLTLRVVFNLFNSIKDHLKVQLEVFLT 732
            L +LLEL    +RC+ G L+  E+ W +   CY+   ++   R+S  L   A NTLAH+VL +F   + +   + A S                        P    A+G S D G +         E  A AD  + N        +L  +++FL+RL  P +N  A CVLGL LINI LE  G  LG  P LV V++GDL K LLQNS+T +L +LSLTLRVVFNLFNSIKDHLKVQLEVF T
Sbjct:  310 LMKLLELVEYAVRCDAGPLITGENVWKMAQLCYS---ISCQPRSSLHLARAAENTLAHLVLTVFDRIDELEPKKRALSLDRHHSPHPNHLS----------HPDYTEADGDS-DGGHA------AAPEPPAAADRETRNRVGPYGVPLLEQILQFLARLIAPTANDEATCVLGLRLINIVLETAGTGLGHHPRLVSVLQGDLSKFLLQNSETDELAILSLTLRVVFNLFNSIKDHLKVQLEVFFT 534          
BLAST of mRNA_H-paniculata_contig46961.11689.1 vs. uniprot
Match: H3GPL3_PHYRM (SEC7 domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=H3GPL3_PHYRM)

HSP 1 Score: 140 bits (352), Expect = 3.540e-34
Identity = 97/244 (39.75%), Postives = 133/244 (54.51%), Query Frame = 1
Query:    1 LAQLLELSALCLRCEVGELLNDESCWDIFLACYNLYHVTTDDRASGLLRDTAGNTLAHVVLMLFSCERVSRARSAASTXXXXXXXXXXTGDGADVVGKERQPALVGANGSSCDAGSSGNQLSSVEHEALATADAGSNNDTEVEVEGVLVNVMRFLSRLSDPRSNRSAECVLGLSLINIALEAGGADLGRIPALVRVMRGDLCKHLLQNSQTHDLDVLSLTLRVVFNLFNSIKDHLKVQLEVFLT 732
            L +LLEL   C+RC+ G L++ ++ W +   CY+   +    R+S  L  +A NTL+H+VL +F  +R+                   T    +V  ++R+   +     S + G      ++VE     T DA    D    +  +L  ++ F+S L  P  N    CVLGL LIN+ LE  G  LG  P LV V++GDL K LLQNS+T +L +LSLTLRVVFNLFNSIKDHLKVQLEVF T
Sbjct:  133 LMKLLELVEYCVRCDAGHLISGDNLWKMLQLCYS---IRCQPRSSMHLCRSADNTLSHLVLTVF--DRIDELEPQTKNSQPLSPQ---TQQQQEV--EQRKDHTLPEYDESLEIGLGEQPPATVE----LTTDATKAADKPYGIP-LLERILHFVSGLISPTENEEMTCVLGLRLINVVLETAGTGLGNHPCLVSVLQGDLSKFLLQNSETEELGILSLTLRVVFNLFNSIKDHLKVQLEVFFT 361          
BLAST of mRNA_H-paniculata_contig46961.11689.1 vs. uniprot
Match: W2PX92_PHYPN (SEC7 domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=W2PX92_PHYPN)

HSP 1 Score: 137 bits (345), Expect = 3.040e-33
Identity = 101/246 (41.06%), Postives = 136/246 (55.28%), Query Frame = 1
Query:    1 LAQLLELSALCLRCEVGELLNDESCWDIFLACYNLYHVTTDDRASGLLRDTAGNTLAHVVLMLFSC--ERVSRARSAASTXXXXXXXXXXTGDGADVVGKERQPALVGANGSSCDAGSSGNQLSSVEHEALATADAGSNNDTEVEVEGVLVNVMRFLSRLSDPRSNRSAECVLGLSLINIALEAGGADLGRIPALVRVMRGDLCKHLLQNSQTHDLDVLSLTLRVVFNLFNSIKDHLKVQLEVFLT 732
            L +LLEL   C+RC+ G L++ ++ W +   CY+   +    R+S  L  +A NTL+H+VL +F    E   + R +  T            +GA    KE QP  +     S D G    + ++ + E  + A A    D    +  +L  ++ F+S L  P  N    CVLGL LIN+ LE  G  LG  P LV V++GDL K LLQNS+T +L +LSLTLRVVFNLFNSIKDHLKVQLEVF T
Sbjct:  133 LMKLLELVEYCVRCDAGHLISGDNLWKMLQLCYS---IRCQPRSSMHLCRSADNTLSHLVLTVFDRIDELEPQRRPSQPTPMSPQML-----NGAKEEEKE-QP--IPEYDESLDIG----EQTAPQMEPTSDAKAV---DKPYGIP-LLERILHFISGLISPTENEEMTCVLGLRLINVVLETAGTGLGNHPCLVSVLQGDLSKFLLQNSETEELGILSLTLRVVFNLFNSIKDHLKVQLEVFFT 359          
BLAST of mRNA_H-paniculata_contig46961.11689.1 vs. uniprot
Match: A0A3M6VFJ1_9STRA (SEC7 domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VFJ1_9STRA)

HSP 1 Score: 137 bits (345), Expect = 3.040e-33
Identity = 97/249 (38.96%), Postives = 132/249 (53.01%), Query Frame = 1
Query:    1 LAQLLELSALCLRCEVGELLNDESCWDIFLACYNLYHVTTDDRASGLLRDTAGNTLAHVVLMLFSC--ERVSRARSAASTXXXXXXXXXXTGDGADVVGKERQPALVGANGSSCDAGSSGNQLSSVEHEALATADAGSNNDTEVEVE---GVLVNVMRFLSRLSDPRSNRSAECVLGLSLINIALEAGGADLGRIPALVRVMRGDLCKHLLQNSQTHDLDVLSLTLRVVFNLFNSIKDHLKVQLEVFLT 732
            L +LLEL    +RC+ G L++ ++ W +   CY++   T   R+S  L  +A NTL+H+VL +F    E  SR +S+ S             D  D +  + +   V +           + L   E   +   D  S     V+      +L  ++ F+S L+ P  N    CV GL LIN+ LE  G  LG  P LV V++GDL K LLQNS+T +L +LSLTLRVVFNLFNSIKDHLKVQLEVF T
Sbjct:  133 LMKLLELVEYAVRCDAGHLISGDNLWKMLQLCYSIRSQT---RSSMHLCRSADNTLSHLVLTVFDRIDELGSRRKSSPSLTPISPQVLQ---DELDTIKVKEETNEVQSEYD--------DSLGIAEEPTVVPEDPTSEVAKTVDKPYGIPLLERILHFISSLTSPMENEEMTCVQGLRLINVVLETAGTGLGNHPCLVSVLQGDLSKFLLQNSETEELGILSLTLRVVFNLFNSIKDHLKVQLEVFFT 367          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig46961.11689.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVF3_ECTSI8.730e-7549.57GBF1, ArfGEF protein of the BIG/GBF subfamily n=1 ... [more]
A0A6H5JJL6_9PHAE4.100e-7447.46SEC7 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A836CJX6_9STRA4.570e-4236.29Sec7 domain-containing protein n=1 Tax=Tribonema m... [more]
K3X1M9_GLOUD6.470e-3640.98SEC7 domain-containing protein n=1 Tax=Globisporan... [more]
A0A0P1B547_PLAHL1.200e-3539.53Protein kinase n=1 Tax=Plasmopara halstedii TaxID=... [more]
A0A225WXV2_9STRA1.630e-3539.84SEC7 domain-containing protein n=1 Tax=Phytophthor... [more]
A0A5D6YY45_9STRA5.640e-3541.63SEC7 domain-containing protein n=1 Tax=Pythium bra... [more]
H3GPL3_PHYRM3.540e-3439.75SEC7 domain-containing protein n=3 Tax=Phytophthor... [more]
W2PX92_PHYPN3.040e-3341.06SEC7 domain-containing protein n=12 Tax=Phytophtho... [more]
A0A3M6VFJ1_9STRA3.040e-3338.96SEC7 domain-containing protein n=1 Tax=Peronospora... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig46961contigH-paniculata_contig46961:63..1187 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score260.0
Seed ortholog evalue1.1e-66
Seed eggNOG ortholog2880.D7FVF3
Preferred nameGBF1
KEGG koko:K18443
KEGG Pathwayko04144,map04144
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000137,GO:0000139,GO:0000278,GO:0000281,GO:0000578,GO:0000902,GO:0000910,GO:0000911,GO:0001736,GO:0001738,GO:0001775,GO:0002009,GO:0002064,GO:0002252,GO:0002263,GO:0002376,GO:0002790,GO:0003006,GO:0003674,GO:0005085,GO:0005086,GO:0005488,GO:0005515,GO:0005543,GO:0005547,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005783,GO:0005793,GO:0005794,GO:0005795,GO:0005798,GO:0005801,GO:0005802,GO:0005829,GO:0005886,GO:0005933,GO:0006810,GO:0006888,GO:0006890,GO:0006891,GO:0006892,GO:0006893,GO:0006895,GO:0006897,GO:0006900,GO:0006901,GO:0006903,GO:0006914,GO:0006928,GO:0006935,GO:0006955,GO:0006996,GO:0007005,GO:0007010,GO:0007029,GO:0007030,GO:0007049,GO:0007155,GO:0007163,GO:0007164,GO:0007275,GO:0007346,GO:0007389,GO:0007424,GO:0007431,GO:0008104,GO:0008150,GO:0008152,GO:0008289,GO:0009056,GO:0009058,GO:0009306,GO:0009605,GO:0009606,GO:0009607,GO:0009615,GO:0009653,GO:0009790,GO:0009791,GO:0009793,GO:0009798,GO:0009826,GO:0009846,GO:0009856,GO:0009880,GO:0009888,GO:0009914,GO:0009926,GO:0009942,GO:0009966,GO:0009987,GO:0010008,GO:0010015,GO:0010053,GO:0010054,GO:0010087,GO:0010101,GO:0010102,GO:0010154,GO:0010256,GO:0010274,GO:0010311,GO:0010540,GO:0010646,GO:0010817,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0016049,GO:0016050,GO:0016192,GO:0016197,GO:0016236,GO:0016477,GO:0016482,GO:0017016,GO:0017137,GO:0019898,GO:0019899,GO:0021700,GO:0022402,GO:0022411,GO:0022414,GO:0022610,GO:0022622,GO:0023051,GO:0023052,GO:0030010,GO:0030029,GO:0030036,GO:0030154,GO:0030593,GO:0030595,GO:0030855,GO:0031090,GO:0031224,GO:0031252,GO:0031267,GO:0031410,GO:0031982,GO:0031984,GO:0031985,GO:0032012,GO:0032501,GO:0032502,GO:0032506,GO:0032509,GO:0032879,GO:0032880,GO:0032940,GO:0032989,GO:0033036,GO:0033363,GO:0033365,GO:0034067,GO:0034613,GO:0035091,GO:0035148,GO:0035149,GO:0035150,GO:0035151,GO:0035152,GO:0035158,GO:0035159,GO:0035239,GO:0035272,GO:0035295,GO:0035296,GO:0035964,GO:0040007,GO:0040011,GO:0042147,GO:0042221,GO:0042330,GO:0042802,GO:0042803,GO:0042886,GO:0042995,GO:0043001,GO:0043087,GO:0043167,GO:0043168,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044248,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0044706,GO:0045184,GO:0045229,GO:0046578,GO:0046903,GO:0046907,GO:0046983,GO:0048193,GO:0048194,GO:0048199,GO:0048200,GO:0048205,GO:0048209,GO:0048308,GO:0048313,GO:0048316,GO:0048364,GO:0048468,GO:0048469,GO:0048513,GO:0048527,GO:0048528,GO:0048583,GO:0048589,GO:0048608,GO:0048646,GO:0048729,GO:0048731,GO:0048732,GO:0048764,GO:0048765,GO:0048856,GO:0048869,GO:0048870,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0050900,GO:0051020,GO:0051049,GO:0051056,GO:0051179,GO:0051234,GO:0051301,GO:0051336,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051674,GO:0051704,GO:0051707,GO:0051716,GO:0051726,GO:0060326,GO:0060341,GO:0060429,GO:0060541,GO:0060560,GO:0060627,GO:0060918,GO:0061024,GO:0061162,GO:0061339,GO:0061458,GO:0061640,GO:0061919,GO:0061951,GO:0065007,GO:0065008,GO:0065009,GO:0070727,GO:0070887,GO:0070971,GO:0070972,GO:0070973,GO:0071554,GO:0071555,GO:0071621,GO:0071695,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0071985,GO:0072593,GO:0072657,GO:0072659,GO:0080025,GO:0080119,GO:0090066,GO:0090150,GO:0090166,GO:0090406,GO:0090558,GO:0090627,GO:0090696,GO:0090697,GO:0090698,GO:0097111,GO:0097529,GO:0097530,GO:0097708,GO:0098586,GO:0098588,GO:0098657,GO:0098772,GO:0098791,GO:0098805,GO:0098876,GO:0099402,GO:0120025,GO:1901981,GO:1902410,GO:1902531,GO:1902936,GO:1903008,GO:1903047,GO:1903409,GO:1903420,GO:1903827,GO:1905392,GO:1905393,GO:1990266,GO:1990778,GO:2000008
EggNOG free text desc.regulation of ARF protein signal transduction
EggNOG OGsCOG5307@1,KOG0928@2759
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Exons2
Model size732
Cds size732
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930397.9643495-CDS-H-paniculata_contig46961:62..4801622930397.9643495-CDS-H-paniculata_contig46961:62..480Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig46961 63..480 +
1691481273.3707302-CDS-H-paniculata_contig46961:62..4801691481273.3707302-CDS-H-paniculata_contig46961:62..480Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig46961 63..480 +
1622930397.977448-CDS-H-paniculata_contig46961:873..11871622930397.977448-CDS-H-paniculata_contig46961:873..1187Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig46961 874..1187 +
1691481273.3828628-CDS-H-paniculata_contig46961:873..11871691481273.3828628-CDS-H-paniculata_contig46961:873..1187Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig46961 874..1187 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig46961.11689.1prot_H-paniculata_contig46961.11689.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig46961 63..1187 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig46961.11689.1

>prot_H-paniculata_contig46961.11689.1 ID=prot_H-paniculata_contig46961.11689.1|Name=mRNA_H-paniculata_contig46961.11689.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=244bp
LAQLLELSALCLRCEVGELLNDESCWDIFLACYNLYHVTTDDRASGLLRD
TAGNTLAHVVLMLFSCERVSRARSAASTAAAAATAAAATGDGADVVGKER
QPALVGANGSSCDAGSSGNQLSSVEHEALATADAGSNNDTEVEVEGVLVN
VMRFLSRLSDPRSNRSAECVLGLSLINIALEAGGADLGRIPALVRVMRGD
LCKHLLQNSQTHDLDVLSLTLRVVFNLFNSIKDHLKVQLEVFLT
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mRNA from alignment at H-paniculata_contig46961:63..1187+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig46961.11689.1 ID=mRNA_H-paniculata_contig46961.11689.1|Name=mRNA_H-paniculata_contig46961.11689.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1125bp|location=Sequence derived from alignment at H-paniculata_contig46961:63..1187+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTGGCACAGCTACTGGAGCTCTCGGCTCTGTGCCTGCGGTGCGAAGTAGG GGAACTGCTGAACGACGAGAGCTGCTGGGACATATTTCTGGCGTGCTACA ATCTTTACCATGTGACCACCGACGACAGAGCATCCGGCTTGCTCAGAGAC ACCGCGGGAAACACCCTCGCACACGTCGTCTTAATGCTTTTCAGTTGCGA GCGAGTGTCGCGAGCGAGAAGCGCGGCCTCGACCGCCGCTGCTGCCGCCA CCGCCGCGGCGGCGACGGGCGACGGTGCCGACGTAGTCGGAAAAGAACGC CAACCTGCCCTGGTGGGCGCAAACGGCAGCTCCTGTGACGCCGGAAGCAG CGGTAACCAGTTGTCGTCCGTCGAGCATGAAGCACTCGCGACGGCGGACG CTGGAAGCAACAATGATAGTAGTAATTCTGGCTTCTGGCATGGCGCAGCG GGTGGAGGCATTAGCGGTGGTAGTGGTAATGCGGTAAAACGACCGTTGCA GTCGTCGCCGCAGGAGGATGAAACGGAACAAGAGCCGTGGCCTTCCATCG ACGGCGACAGTTACACGGGCGGCGGGGAGGCTAACGGCCGGTTCGCGAAA GGGCTAGGGGACGACAGAGCGGCATTGGAAGGCATGAGCGGGAGCCACGC TGACCGAGGCATGAGCGGCTGTGACGGTAGCCGAGCAGGAAAGGGGAGCG CGAAAGCTGTAGATTCGCCCGCAGGTGGGCGAATAGAGGGTAAAGGATCG GGAAGTTGGCGTGGTGAGAGTGGGGGAGGGGAAGAAGGGGAAGAAGGGGA CATGGAAGAAGCGGAGGTGGAGGTGGAGGGGGTGTTAGTCAACGTGATGA GGTTCTTGTCGCGGCTTAGCGATCCGCGGTCCAACAGGAGCGCAGAGTGT GTGTTGGGGCTGAGCTTGATCAACATTGCGCTTGAGGCTGGAGGGGCGGA TCTAGGCCGGATTCCGGCGCTTGTGCGAGTCATGCGCGGCGATCTGTGCA AGCACCTGTTGCAGAACAGCCAGACGCACGACCTGGACGTACTCAGCCTA ACTCTGCGGGTGGTGTTCAACTTGTTCAATTCTATCAAGGATCATCTTAA AGTTCAGCTGGAGGTGTTTCTCACC
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Coding sequence (CDS) from alignment at H-paniculata_contig46961:63..1187+

>mRNA_H-paniculata_contig46961.11689.1 ID=mRNA_H-paniculata_contig46961.11689.1|Name=mRNA_H-paniculata_contig46961.11689.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1464bp|location=Sequence derived from alignment at H-paniculata_contig46961:63..1187+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTGGCACAGCTACTGGAGCTCTCGGCTCTGTGCCTGCGGTGCGAAGTAGG
GGAACTGCTGAACGACGAGAGCTGCTGGGACATATTTCTGGCGTGCTACA
ATCTTTACCATGTGACCACCGACGACAGAGCATCCGGCTTGCTCAGAGAC
ACCGCGGGAAACACCCTCGCACACGTCGTCTTAATGCTTTTCAGTTGCGA
GCGAGTGTCGCGAGCGAGAAGCGCGGCCTCGACCGCCGCTGCTGCCGCCA
CCGCCGCGGCGGCGACGGGCGACGGTGCCGACGTAGTCGGAAAAGAACGC
CAACCTGCCCTGGTGGGCGCAAACGGCAGCTCCTGTGACGCCGGAAGCAG
CGGTAACCAGTTGTCGTCCGTCGAGCATGAAGCACTCGCGACGGCGGACG
CTGGAAGCAACAATGATACTGGCACAGCTACTGGAGCTCTCGGCTCTGTG
CCTGCGGTGCGAAGTAGGGGAACTGCTGAACGACGAGAGCTGCTGGGACA
TATTTCTGGCGTGCTACAATCTTTACCATGTGACCACCGACGACAGAGCA
TCCGGCTTGCTCAGAGACACCGCGGGAAACACCCTCGCACACGTCGTCTT
AATGCTTTTCAGTTGCGAGCGAGTGTCGCGAGCGAGAAGCGCGGCCTCGA
CCGCCGCTGCTGCCGCCACCGCCGCGGCGGCGACGGGCGACGGTGCCGAC
GTAGTCGGAAAAGAACGCCAACCTGCCCTGGTGGGCGCAAACGGCAGCTC
CTGTGACGCCGGAAGCAGCGGTAACCAGTTGTCGTCCGTCGAGCATGAAG
CACTCGCGACGGCGGACGCTGGAAGCAACAATGATACGGAGGTGGAGGTG
GAGGGGGTGTTAGTCAACGTGATGAGGTTCTTGTCGCGGCTTAGCGATCC
GCGGTCCAACAGGAGCGCAGAGTGTGTGTTGGGGCTGAGCTTGATCAACA
TTGCGCTTGAGGCTGGAGGGGCGGATCTAGGCCGGATTCCGGCGCTTGTG
CGAGTCATGCGCGGCGATCTGTGCAAGCACCTGTTGCAGAACAGCCAGAC
GCACGACCTGGACGTACTCAGCCTAACTCTGCGGGTGGTGTTCAACTTGT
TCAATTCTATCAAGGATCATCTTAAAGTTCAGCTGGAGGTGTTTCTCACC
CGGAGGTGGAGGTGGAGGGGGTGTTAGTCAACGTGATGAGGTTCTTGTCG
CGGCTTAGCGATCCGCGGTCCAACAGGAGCGCAGAGTGTGTGTTGGGGCT
GAGCTTGATCAACATTGCGCTTGAGGCTGGAGGGGCGGATCTAGGCCGGA
TTCCGGCGCTTGTGCGAGTCATGCGCGGCGATCTGTGCAAGCACCTGTTG
CAGAACAGCCAGACGCACGACCTGGACGTACTCAGCCTAACTCTGCGGGT
GGTGTTCAACTTGTTCAATTCTATCAAGGATCATCTTAAAGTTCAGCTGG
AGGTGTTTCTCACC
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