mRNA_H-paniculata_contig46961.11689.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig46961.11689.1 vs. uniprot
Match: D7FVF3_ECTSI (GBF1, ArfGEF protein of the BIG/GBF subfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVF3_ECTSI) HSP 1 Score: 256 bits (655), Expect = 8.730e-75 Identity = 174/351 (49.57%), Postives = 195/351 (55.56%), Query Frame = 1
Query: 1 LAQLLELSALCLRCEVGELLNDESCWDIFLACYNLYHVTTDDRASGLLRDTAGNTLAHVVLMLFSCERVSRARSAASTXXXXXXXXXXTGDGA---DVVGKE--------------RQPALVGAN--------------------GSSCDAG-----SSGNQL-------------SSVEHEALATADAGSNNDTE----------------------------------------------------VEVEGVLVNVMRFLSRLSDPRSNRSAECVLGLSLINIALEAGGADLGRIPALVRVMRGDLCKHLLQNSQTHDLDVLSLTLRVVFNLFNSIKDHLKVQLEVFLT 732
L +LLELSALCLRCEVG+LL DESCW+IF+ACYNLYH+TTDD++ GLLRDTAGNTLAH+VLMLFS RVSRA +A+ GA + +G++ + P G + GSS AG SSG Q E E + D G+N+D E EGVLV +MRFLS LSDPRSN SAECVL LSLINIALEAGGADLGRIP+LVRVMRGDLCKHLLQNSQT DLDVLSLTLRVVFNLFNSIKDHLKVQLEVFLT
Sbjct: 142 LMKLLELSALCLRCEVGDLLTDESCWNIFVACYNLYHITTDDKSFGLLRDTAGNTLAHIVLMLFSRPRVSRASKSAAPGGAATADATVAAGGAVLHETLGQKAGAEARDCPPTEPSKAPPTPGGDRDGLAQASPXXXXXXGLWRHGSSSKAGDEEGSSSGKQTPFGRGRGVPPPLEGGQEEEPWPSLD-GANDDGASQGVDDGVVVAGRGALKAMMGPGNGRFGLGGVGGPVSPVQPTKHGGGRDSGTAEQEGVLVKLMRFLSLLSDPRSNGSAECVLSLSLINIALEAGGADLGRIPSLVRVMRGDLCKHLLQNSQTDDLDVLSLTLRVVFNLFNSIKDHLKVQLEVFLT 491
BLAST of mRNA_H-paniculata_contig46961.11689.1 vs. uniprot
Match: A0A6H5JJL6_9PHAE (SEC7 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJL6_9PHAE) HSP 1 Score: 254 bits (650), Expect = 4.100e-74 Identity = 168/354 (47.46%), Postives = 186/354 (52.54%), Query Frame = 1
Query: 1 LAQLLELSALCLRCEVGELLNDESCWDIFLACYNLYHVTTDDRASGLLRDTAGNTLAHVVLMLFSCERVSRA-RSAASTXXXXXXXXXXTG-------------------------------------------------------------------------------------------------------------DGADVVGKERQPALVGANGSSCDAGSSGNQLSSVEHEALATADAGSNNDTEVEVEGVLVNVMRFLSRLSDPRSNRSAECVLGLSLINIALEAGGADLGRIPALVRVMRGDLCKHLLQNSQTHDLDVLSLTLRVVFNLFNSIKDHLKVQLEVFLT 732
L +LLELSALCLRCEVG+LL DESCW+IF+ACYNLYH+TT+D++ GLLRDTAGNTLAH+VLMLFS RVSRA +SAA G DG V G+ A++G G G +S V+ T G + E EGVLV +MRFLS LSDPRSN SAECVL LSLINIALEAGGADLGRIP+LVRVMRGDLCKHLLQNSQT DLDVLSLTLRVVFNLFNSIKDHLKVQLEVFLT
Sbjct: 142 LMKLLELSALCLRCEVGDLLTDESCWNIFVACYNLYHITTNDKSFGLLRDTAGNTLAHIVLMLFSHPRVSRASKSAAPGGALRADATVAAGKAVLHETQGQKAGEEPRDFPPMDQSKAPPTPGGDGDGLAQGSPPSPAAAGLWRHGSSKAGDEEGSSSGGKQTPFGRGGGVPPPLEGGQEEEPWPSLDGANDDGASQGVDDGIVVAGRGALKAMMGPGNGRFGLGGVGGPVSPVQ----PTKHGGGRDSDAAEQEGVLVKLMRFLSLLSDPRSNGSAECVLSLSLINIALEAGGADLGRIPSLVRVMRGDLCKHLLQNSQTDDLDVLSLTLRVVFNLFNSIKDHLKVQLEVFLT 491
BLAST of mRNA_H-paniculata_contig46961.11689.1 vs. uniprot
Match: A0A836CJX6_9STRA (Sec7 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJX6_9STRA) HSP 1 Score: 162 bits (411), Expect = 4.570e-42 Identity = 127/350 (36.29%), Postives = 156/350 (44.57%), Query Frame = 1
Query: 1 LAQLLELSALCLRCEVGELLNDESCWDIFLACYNLYHVTTDDRASGLLRDTAGNTLAHVVLMLFSCERVSRARSAASTXXXXXXXXXXTGDGADVVGKERQPALVGANGSSCDAGSSGNQLSSVEHEA-------------------------------LATADAGSNNDTEVEVEGVLVNVMRFLSRLSDPRSNRSAECVLGLSLINIALEAGGADLGRIPALVRVM---------------------------------------------------------------------------RGDLCKHLLQNSQTHDLDVLSLTLRVVFNLFNSIKDHLKVQLEVFLT 732
L +LLELSALCLRCEVG LL+DE CWDIF +CY +++ +R + LL +TAGNT+AH+VL++FS R S S GK+R G+ A EHE + AG + ++ V LV +MRFLSRLS+PR N C+L LSLINIALEAGG+ LG+ ALV VM +GDLCKHLL SQT +L++LSLTLRVVFNLFNSIKDHLKVQLEVF+T
Sbjct: 143 LMKLLELSALCLRCEVGRLLSDERCWDIFQSCYG---ISSQERVTSLLGNTAGNTIAHIVLIVFSRPRPPPQLSPRSKAK---------------AGKQRAVKAAGS-----PAXXXXXXXXXXEHEGEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQSPAGEGGEQQLNV---LVEIMRFLSRLSNPRENSEDTCILCLSLINIALEAGGSQLGQQQALVEVMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTLGALMVGAGLLLQHQMQQLARFGDAITLLSPYSVVMQGDLCKHLLHCSQTEELNILSLTLRVVFNLFNSIKDHLKVQLEVFIT 466
BLAST of mRNA_H-paniculata_contig46961.11689.1 vs. uniprot
Match: K3X1M9_GLOUD (SEC7 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X1M9_GLOUD) HSP 1 Score: 145 bits (365), Expect = 6.470e-36 Identity = 100/244 (40.98%), Postives = 129/244 (52.87%), Query Frame = 1
Query: 1 LAQLLELSALCLRCEVGELLNDESCWDIFLACYNLYHVTTDDRASGLLRDTAGNTLAHVVLMLFSCERVSRARSAASTXXXXXXXXXXTGDGADVVGKERQPALVGANGSSCDAGSSGNQLSSVEHEALATADAGSNNDTEVEVEGVLVNVMRFLSRLSDPRSNRSAECVLGLSLINIALEAGGADLGRIPALVRVMRGDLCKHLLQNSQTHDLDVLSLTLRVVFNLFNSIKDHLKVQLEVFLT 732
L +LLEL C+RCEVG L+ E+ W + CY+ ++ R+S L A NTLAH+VL +F +R+ S G+ D E +S +H +A +A N +L +++FL+ L P +N A CVLGL LINI LE G LG LV V++GDL K LLQNS+T +L +LSLTLRVVFNLFNSIKDHLKVQLEVF T
Sbjct: 136 LMKLLELVEYCVRCEVGPLITGENLWKMVQLCYS---ISVQPRSSLHLSRAAENTLAHLVLTVF--DRIDELEPKKSIATDPRNSQHNDGNEEDEEDAEHV-------------------VSEYQHRDVADKEA--RNRVGPYGIPLLEKILQFLASLISPTTNDEATCVLGLRLINIVLETAGTGLGNHLGLVSVLQGDLSKFLLQNSETDELAILSLTLRVVFNLFNSIKDHLKVQLEVFFT 353
BLAST of mRNA_H-paniculata_contig46961.11689.1 vs. uniprot
Match: A0A0P1B547_PLAHL (Protein kinase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B547_PLAHL) HSP 1 Score: 144 bits (363), Expect = 1.200e-35 Identity = 100/253 (39.53%), Postives = 133/253 (52.57%), Query Frame = 1
Query: 1 LAQLLELSALCLRCEVGELLNDESCWDIFLACYNLYHVTTDDRASGLLRDTAGNTLAHVVLMLFSCERVSRARSAASTXXXXXXXXXXTGDGA----DVVGKERQPALVGANGSSCDAGSSGNQLSSVEHEALATADAGSNNDTEVEVEG-----VLVNVMRFLSRLSDPRSNRSAECVLGLSLINIALEAGGADLGRIPALVRVMRGDLCKHLLQNSQTHDLDVLSLTLRVVFNLFNSIKDHLKVQLEVFLT 732
L +LLEL C+RC+ G L++DE+ W + CY+ + R+S L +A NTL+H+VL +F + +S + D + KE++ + S D E E LA + S DT V+ +L ++ F+S L P N CVLGL LIN+ LE G LG LV V++GDL K LLQNS+T +L +LSLTLRVVFNLFNSIKDHLKVQLEVF T
Sbjct: 119 LMKLLELVEYCIRCDAGHLISDENLWKMLQLCYS---IRCQPRSSMHLSRSADNTLSHLVLTVFDRINELEPKRKSSQPQLPVLLQDESNDQQKEDNEASNKEQEVLTLPVYDESLDI---------EEQETLAPVE--STPDTAKIVDKPYGIPLLERILHFISGLISPTENEEMTCVLGLRLINVVLETAGTGLGNHLCLVSVLQGDLSKFLLQNSETEELGILSLTLRVVFNLFNSIKDHLKVQLEVFFT 357
BLAST of mRNA_H-paniculata_contig46961.11689.1 vs. uniprot
Match: A0A225WXV2_9STRA (SEC7 domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WXV2_9STRA) HSP 1 Score: 144 bits (362), Expect = 1.630e-35 Identity = 98/246 (39.84%), Postives = 132/246 (53.66%), Query Frame = 1
Query: 1 LAQLLELSALCLRCEVGELLNDESCWDIFLACYNLYHVTTDDRASGLLRDTAGNTLAHVVLMLFSC--ERVSRARSAASTXXXXXXXXXXTGDGADVVGKERQPALVGANGSSCDAGSSGNQLSSVEHEALATADAGSNNDTEVEVEGVLVNVMRFLSRLSDPRSNRSAECVLGLSLINIALEAGGADLGRIPALVRVMRGDLCKHLLQNSQTHDLDVLSLTLRVVFNLFNSIKDHLKVQLEVFLT 732
L +LLEL C+RC+ G L++ E+ W + CY+ + R+S L +A NTL+H+VL +F E + +S+ G+ D + E +L G Q+ T+D D + +L ++ F+S L P N A CVLGL LIN+ LE G LG P+LV V++GDL K LLQNS+T +L +LSLTLRVVFNLFNSIKDHLKVQLEVF T
Sbjct: 133 LMKLLELVEYCVRCDAGHLISGENLWKMLQLCYS---IRCQPRSSMHLCRSADNTLSHLVLTVFDRIDELEVQRKSSHPLPTSPQTSQSQNGEKRDEILLEYDESL-----------DIGEQIPPT---VEPTSDGAKAVDKPYGIP-LLERILHFISGLISPTENEEATCVLGLRLINVVLETAGTGLGNHPSLVSVLQGDLSKFLLQNSETEELGILSLTLRVVFNLFNSIKDHLKVQLEVFFT 360
BLAST of mRNA_H-paniculata_contig46961.11689.1 vs. uniprot
Match: A0A5D6YY45_9STRA (SEC7 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YY45_9STRA) HSP 1 Score: 142 bits (358), Expect = 5.640e-35 Identity = 102/245 (41.63%), Postives = 131/245 (53.47%), Query Frame = 1
Query: 1 LAQLLELSALCLRCEVGELLNDESCWDIFLACYNLYHVTTDDRASGLLRDTAGNTLAHVVLMLFS-CERVSRARSAASTXXXXXXXXXXTGDGADVVGKERQPALVGANGSSCDAGSSGNQLSSVEHEALATADAGSNNDTEVEVEGVLVNVMRFLSRLSDPRSNRSAECVLGLSLINIALEAGGADLGRIPALVRVMRGDLCKHLLQNSQTHDLDVLSLTLRVVFNLFNSIKDHLKVQLEVFLT 732
L +LLEL +RC+ G L+ E+ W + CY+ ++ R+S L A NTLAH+VL +F + + + A S P A+G S D G + E A AD + N +L +++FL+RL P +N A CVLGL LINI LE G LG P LV V++GDL K LLQNS+T +L +LSLTLRVVFNLFNSIKDHLKVQLEVF T
Sbjct: 310 LMKLLELVEYAVRCDAGPLITGENVWKMAQLCYS---ISCQPRSSLHLARAAENTLAHLVLTVFDRIDELEPKKRALSLDRHHSPHPNHLS----------HPDYTEADGDS-DGGHA------AAPEPPAAADRETRNRVGPYGVPLLEQILQFLARLIAPTANDEATCVLGLRLINIVLETAGTGLGHHPRLVSVLQGDLSKFLLQNSETDELAILSLTLRVVFNLFNSIKDHLKVQLEVFFT 534
BLAST of mRNA_H-paniculata_contig46961.11689.1 vs. uniprot
Match: H3GPL3_PHYRM (SEC7 domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=H3GPL3_PHYRM) HSP 1 Score: 140 bits (352), Expect = 3.540e-34 Identity = 97/244 (39.75%), Postives = 133/244 (54.51%), Query Frame = 1
Query: 1 LAQLLELSALCLRCEVGELLNDESCWDIFLACYNLYHVTTDDRASGLLRDTAGNTLAHVVLMLFSCERVSRARSAASTXXXXXXXXXXTGDGADVVGKERQPALVGANGSSCDAGSSGNQLSSVEHEALATADAGSNNDTEVEVEGVLVNVMRFLSRLSDPRSNRSAECVLGLSLINIALEAGGADLGRIPALVRVMRGDLCKHLLQNSQTHDLDVLSLTLRVVFNLFNSIKDHLKVQLEVFLT 732
L +LLEL C+RC+ G L++ ++ W + CY+ + R+S L +A NTL+H+VL +F +R+ T +V ++R+ + S + G ++VE T DA D + +L ++ F+S L P N CVLGL LIN+ LE G LG P LV V++GDL K LLQNS+T +L +LSLTLRVVFNLFNSIKDHLKVQLEVF T
Sbjct: 133 LMKLLELVEYCVRCDAGHLISGDNLWKMLQLCYS---IRCQPRSSMHLCRSADNTLSHLVLTVF--DRIDELEPQTKNSQPLSPQ---TQQQQEV--EQRKDHTLPEYDESLEIGLGEQPPATVE----LTTDATKAADKPYGIP-LLERILHFVSGLISPTENEEMTCVLGLRLINVVLETAGTGLGNHPCLVSVLQGDLSKFLLQNSETEELGILSLTLRVVFNLFNSIKDHLKVQLEVFFT 361
BLAST of mRNA_H-paniculata_contig46961.11689.1 vs. uniprot
Match: W2PX92_PHYPN (SEC7 domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=W2PX92_PHYPN) HSP 1 Score: 137 bits (345), Expect = 3.040e-33 Identity = 101/246 (41.06%), Postives = 136/246 (55.28%), Query Frame = 1
Query: 1 LAQLLELSALCLRCEVGELLNDESCWDIFLACYNLYHVTTDDRASGLLRDTAGNTLAHVVLMLFSC--ERVSRARSAASTXXXXXXXXXXTGDGADVVGKERQPALVGANGSSCDAGSSGNQLSSVEHEALATADAGSNNDTEVEVEGVLVNVMRFLSRLSDPRSNRSAECVLGLSLINIALEAGGADLGRIPALVRVMRGDLCKHLLQNSQTHDLDVLSLTLRVVFNLFNSIKDHLKVQLEVFLT 732
L +LLEL C+RC+ G L++ ++ W + CY+ + R+S L +A NTL+H+VL +F E + R + T +GA KE QP + S D G + ++ + E + A A D + +L ++ F+S L P N CVLGL LIN+ LE G LG P LV V++GDL K LLQNS+T +L +LSLTLRVVFNLFNSIKDHLKVQLEVF T
Sbjct: 133 LMKLLELVEYCVRCDAGHLISGDNLWKMLQLCYS---IRCQPRSSMHLCRSADNTLSHLVLTVFDRIDELEPQRRPSQPTPMSPQML-----NGAKEEEKE-QP--IPEYDESLDIG----EQTAPQMEPTSDAKAV---DKPYGIP-LLERILHFISGLISPTENEEMTCVLGLRLINVVLETAGTGLGNHPCLVSVLQGDLSKFLLQNSETEELGILSLTLRVVFNLFNSIKDHLKVQLEVFFT 359
BLAST of mRNA_H-paniculata_contig46961.11689.1 vs. uniprot
Match: A0A3M6VFJ1_9STRA (SEC7 domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VFJ1_9STRA) HSP 1 Score: 137 bits (345), Expect = 3.040e-33 Identity = 97/249 (38.96%), Postives = 132/249 (53.01%), Query Frame = 1
Query: 1 LAQLLELSALCLRCEVGELLNDESCWDIFLACYNLYHVTTDDRASGLLRDTAGNTLAHVVLMLFSC--ERVSRARSAASTXXXXXXXXXXTGDGADVVGKERQPALVGANGSSCDAGSSGNQLSSVEHEALATADAGSNNDTEVEVE---GVLVNVMRFLSRLSDPRSNRSAECVLGLSLINIALEAGGADLGRIPALVRVMRGDLCKHLLQNSQTHDLDVLSLTLRVVFNLFNSIKDHLKVQLEVFLT 732
L +LLEL +RC+ G L++ ++ W + CY++ T R+S L +A NTL+H+VL +F E SR +S+ S D D + + + V + + L E + D S V+ +L ++ F+S L+ P N CV GL LIN+ LE G LG P LV V++GDL K LLQNS+T +L +LSLTLRVVFNLFNSIKDHLKVQLEVF T
Sbjct: 133 LMKLLELVEYAVRCDAGHLISGDNLWKMLQLCYSIRSQT---RSSMHLCRSADNTLSHLVLTVFDRIDELGSRRKSSPSLTPISPQVLQ---DELDTIKVKEETNEVQSEYD--------DSLGIAEEPTVVPEDPTSEVAKTVDKPYGIPLLERILHFISSLTSPMENEEMTCVQGLRLINVVLETAGTGLGNHPCLVSVLQGDLSKFLLQNSETEELGILSLTLRVVFNLFNSIKDHLKVQLEVFFT 367 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig46961.11689.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig46961.11689.1 >prot_H-paniculata_contig46961.11689.1 ID=prot_H-paniculata_contig46961.11689.1|Name=mRNA_H-paniculata_contig46961.11689.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=244bp LAQLLELSALCLRCEVGELLNDESCWDIFLACYNLYHVTTDDRASGLLRDback to top mRNA from alignment at H-paniculata_contig46961:63..1187+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig46961.11689.1 ID=mRNA_H-paniculata_contig46961.11689.1|Name=mRNA_H-paniculata_contig46961.11689.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1125bp|location=Sequence derived from alignment at H-paniculata_contig46961:63..1187+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig46961:63..1187+ >mRNA_H-paniculata_contig46961.11689.1 ID=mRNA_H-paniculata_contig46961.11689.1|Name=mRNA_H-paniculata_contig46961.11689.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1464bp|location=Sequence derived from alignment at H-paniculata_contig46961:63..1187+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |