prot_H-paniculata_contig469.11678.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig469.11678.1
Unique Nameprot_H-paniculata_contig469.11678.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length381
Homology
BLAST of mRNA_H-paniculata_contig469.11678.1 vs. uniprot
Match: D7FJ86_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJ86_ECTSI)

HSP 1 Score: 214 bits (546), Expect = 1.370e-58
Identity = 176/375 (46.93%), Postives = 217/375 (57.87%), Query Frame = 0
Query:    4 AASEGGGGS------APTRNSRSFHGLQNILPQAASRLSRRERGFTAAIAGTGSREGRGRFSMSSERQQRAGSEKDASPRQSGG----SERASKNERYDRGLLQGDSGTHSVTDSYDLNSYGSYASDDEDGNHEVGLSIDGDDEEEPRGGI-----LDPS-------LGSTPSPEILLAYGSEHGVTLPAFSLQGGSSSSHGVRSSSHNMSIXXXXXXXXXXXXXXCHS--------GLGGRRDVASRQGSAVGGMTRVLSWHGGMSPSDAGLEDEE------EECEVGVGSEEDMVARKMEAGVLGTTS-------QSATTCYICCMRPADAVLMECGHSGICYACAQHLAVAPPSVCPVCRHEIQQVLRLSRI 335
            AA + GGGS       P R+SRSFH LQ+  P A   + R  + FTAA+ G+ SREG  RFS+SS RQ  AG+EK+ SPR  G     S+R  +++R+D+ LL GDSGTHSVTDSYDLNS+GS+   DED +HEVGLSIDGD+E+EPR G      +D S         +T  PEILL +GS HG    AFSL GGS S HG+   S     XXXXXXXXXXXXX   S        G   RR   S      GGM R LSW G +S +  G ++ +       + E G G     VA    +G L           +  +TCYICC R ADAV+MECGH G+C+ CA  LA +PP +CPVCR  IQ+V +L  I
Sbjct:  467 AAIDDGGGSEERGERVPQRSSRSFHVLQDCFPHARGAVRRGGQRFTAAVTGSSSREGHERFSVSSGRQL-AGAEKEGSPRPRGEDGATSKRTPEDDRHDQCLLPGDSGTHSVTDSYDLNSFGSFVDSDED-SHEVGLSIDGDEEDEPRDGXXXXXAIDGSSFHESLPATTTEPPEILLGFGSAHGAA--AFSLHGGSGSGHGLCHGSXXXXXXXXXXXXXXXXXXLATSRHRWSAERGTSSRRGAGSSIHGGAGGMPRRLSWPGELSLASVGGDEVDVAAVTASDAEAGRGG----VATGGSSGPLXXXXXXXXXXXREHSTCYICCERRADAVMMECGHGGVCFTCATTLADSPPHLCPVCRKVIQEVFKLHEI 833          
BLAST of mRNA_H-paniculata_contig469.11678.1 vs. uniprot
Match: A0A7S3JUI3_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JUI3_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 2.050e-11
Identity = 32/55 (58.18%), Postives = 42/55 (76.36%), Query Frame = 0
Query:  279 SATTCYICCMRPADAVLMECGHSGICYACAQHLAVAPPSVCPVCRHEIQQVLRLS 333
            +++ CYIC + P DAVLMECGH+G+C++CAQ LAV  P  CP+CR  I  VL+LS
Sbjct:  426 NSSLCYICYVAPRDAVLMECGHAGVCFSCAQKLAVRHPRSCPICRQPISTVLKLS 480          
BLAST of mRNA_H-paniculata_contig469.11678.1 vs. uniprot
Match: A0A7S2XWW7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWW7_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 6.160e-10
Identity = 30/65 (46.15%), Postives = 42/65 (64.62%), Query Frame = 0
Query:  281 TTCYICCMRPADAVLMECGHSGICYACAQHLAVAPPSVCPVCRHEIQQVLRLSRIVTVRSGGSLV 345
            T+C +C    ++AVL+ECGHSG+C+ CAQ LA   P  CP+CR  I Q+LR+   +   SG + V
Sbjct:   31 TSCLVCWNARSNAVLLECGHSGLCFPCAQALAQRYPQQCPMCRQNIVQILRIEPEIAGTSGQTRV 95          
BLAST of mRNA_H-paniculata_contig469.11678.1 vs. uniprot
Match: A0A7S4F120_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F120_CHRCT)

HSP 1 Score: 69.7 bits (169), Expect = 1.290e-9
Identity = 28/57 (49.12%), Postives = 41/57 (71.93%), Query Frame = 0
Query:  277 SQSATTCYICCMRPADAVLMECGHSGICYACAQHLAVAPPSVCPVCRHEIQQVLRLS 333
            S  ++TC+ICC+  ADAVL++CGH G+CYACA+      P +CP+CR  I+ V R++
Sbjct:  239 SFDSSTCWICCLSTADAVLLDCGHGGLCYACAERCWRRSPHICPLCRASIKVVARVA 295          
BLAST of mRNA_H-paniculata_contig469.11678.1 vs. uniprot
Match: A0A7S0I1C8_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0I1C8_9EUKA)

HSP 1 Score: 65.1 bits (157), Expect = 1.660e-9
Identity = 28/51 (54.90%), Postives = 34/51 (66.67%), Query Frame = 0
Query:  282 TCYICCMRPADAVLMECGHSGICYACAQHLAVAPPSVCPVCRHEIQQVLRL 332
            TC+ICC  P DAVLMECGH GIC  CA   A   P +CP+CR  I  V+++
Sbjct:   45 TCWICCSGPCDAVLMECGHGGICMDCATQCAKKRPPLCPLCRARILVVVKV 95          
BLAST of mRNA_H-paniculata_contig469.11678.1 vs. uniprot
Match: A0A7S4BGL3_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BGL3_CHRCT)

HSP 1 Score: 69.7 bits (169), Expect = 1.770e-9
Identity = 28/57 (49.12%), Postives = 41/57 (71.93%), Query Frame = 0
Query:  277 SQSATTCYICCMRPADAVLMECGHSGICYACAQHLAVAPPSVCPVCRHEIQQVLRLS 333
            S  ++TC+ICC+  ADAVL++CGH G+CYACA+      P +CP+CR  I+ V R++
Sbjct:  289 SFDSSTCWICCLSTADAVLLDCGHGGLCYACAERCWRRSPHICPLCRASIKVVARVA 345          
BLAST of mRNA_H-paniculata_contig469.11678.1 vs. uniprot
Match: A0A7S4BGL5_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BGL5_CHRCT)

HSP 1 Score: 69.7 bits (169), Expect = 3.020e-9
Identity = 28/57 (49.12%), Postives = 41/57 (71.93%), Query Frame = 0
Query:  277 SQSATTCYICCMRPADAVLMECGHSGICYACAQHLAVAPPSVCPVCRHEIQQVLRLS 333
            S  ++TC+ICC+  ADAVL++CGH G+CYACA+      P +CP+CR  I+ V R++
Sbjct:  527 SFDSSTCWICCLSTADAVLLDCGHGGLCYACAERCWRRSPHICPLCRASIKVVARVA 583          
BLAST of mRNA_H-paniculata_contig469.11678.1 vs. uniprot
Match: A0A7S3ZTM6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZTM6_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 3.970e-8
Identity = 27/52 (51.92%), Postives = 35/52 (67.31%), Query Frame = 0
Query:  283 CYICCMRPADAVLMECGHSGICYACAQHLAVAPPSVCPVCRHEIQQVLRLSR 334
            CY+CC+   +AV+MECGH GIC+ C + LA   P  CP+CR  I  VLR+ R
Sbjct:  540 CYVCCVSRKNAVIMECGHGGICFECGKSLASRHPRNCPICRAPISAVLRVER 591          
BLAST of mRNA_H-paniculata_contig469.11678.1 vs. uniprot
Match: A0A8J5XPB8_DIALT (RING-type domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XPB8_DIALT)

HSP 1 Score: 65.1 bits (157), Expect = 1.110e-7
Identity = 27/64 (42.19%), Postives = 38/64 (59.38%), Query Frame = 0
Query:  282 TCYICCMRPADAVLMECGHSGICYACAQHLAVAPPSVCPVCRHEIQQVLRLSRIVTVRSGGSLV 345
            +C+ICC  P DAV +ECGH G+C ACA+        +CP+CR  I QV+ +S +     G  +V
Sbjct:  818 SCWICCEGPRDAVFLECGHGGVCLACARRCLKKKGRLCPMCRQHIDQVVHISVLRVAYEGARIV 881          
BLAST of mRNA_H-paniculata_contig469.11678.1 vs. uniprot
Match: A0A7S4E5I6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E5I6_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 1.590e-7
Identity = 28/52 (53.85%), Postives = 35/52 (67.31%), Query Frame = 0
Query:  279 SATTCYICCMRPADAVLMECGHSGICYACAQHLAVAPPSVCPVCRHEIQQVL 330
            +A  CYICC RP D+VL+ CGHSG CYACA    VA   +CP CR  + Q++
Sbjct:  163 AAGLCYICCDRPMDSVLLPCGHSGACYACAVE-NVARTELCPCCRGAVDQIV 213          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig469.11678.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJ86_ECTSI1.370e-5846.93RING-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A7S3JUI3_9STRA2.050e-1158.18Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S2XWW7_9STRA6.160e-1046.15Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S4F120_CHRCT1.290e-949.12Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S0I1C8_9EUKA1.660e-954.90Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A7S4BGL3_CHRCT1.770e-949.12Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S4BGL5_CHRCT3.020e-949.12Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S3ZTM6_9STRA3.970e-851.92Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A8J5XPB8_DIALT1.110e-742.19RING-type domain-containing protein n=1 Tax=Diacro... [more]
A0A7S4E5I6_9STRA1.590e-753.85Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 283..322
e-value: 2.0E-4
score: 30.7
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 283..323
score: 10.866
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 272..339
e-value: 5.4E-13
score: 50.0
NoneNo IPR availablePFAMPF13920zf-C3HC4_3coord: 281..329
e-value: 1.2E-11
score: 44.2
NoneNo IPR availablePANTHERPTHR46858:SF5RING/U-BOX SUPERFAMILY PROTEINcoord: 263..332
NoneNo IPR availablePANTHERPTHR46858FAMILY NOT NAMEDcoord: 263..332
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 282..329

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig469contigH-paniculata_contig469:6930..13063 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig469.11678.1mRNA_H-paniculata_contig469.11678.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig469 6930..13064 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig469.11678.1 ID=prot_H-paniculata_contig469.11678.1|Name=mRNA_H-paniculata_contig469.11678.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=381bp
TATAASEGGGGSAPTRNSRSFHGLQNILPQAASRLSRRERGFTAAIAGTG
SREGRGRFSMSSERQQRAGSEKDASPRQSGGSERASKNERYDRGLLQGDS
GTHSVTDSYDLNSYGSYASDDEDGNHEVGLSIDGDDEEEPRGGILDPSLG
STPSPEILLAYGSEHGVTLPAFSLQGGSSSSHGVRSSSHNMSIHGHSSHG
FSGHGYSCHSGLGGRRDVASRQGSAVGGMTRVLSWHGGMSPSDAGLEDEE
EECEVGVGSEEDMVARKMEAGVLGTTSQSATTCYICCMRPADAVLMECGH
SGICYACAQHLAVAPPSVCPVCRHEIQQVLRLSRIVTVRSGGSLVGGSGG
GGGGNVSGGEYTSGDELSGGEGSVVAIASSG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD