mRNA_H-paniculata_contig46864.11669.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig46864.11669.1 vs. uniprot
Match: D7FJ79_ECTSI (CBS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ79_ECTSI) HSP 1 Score: 115 bits (288), Expect = 2.480e-30 Identity = 54/78 (69.23%), Postives = 66/78 (84.62%), Query Frame = 3
Query: 3 LAHRLNPQMTFISEVMTPNPTMVRMDDDAMTCLGIMVERRFRHLPVVDGSGIIAGVLSIAKCLYDAIHRLEKKAMRAE 236
+A+RL+P T +SEVMTP+PT+V M D AM CLGIM+E+RFRHLPV+DG G + G+LSIAKCLYDAI RL+KKA RAE
Sbjct: 32 VANRLDPSSTTVSEVMTPHPTIVHMADSAMECLGIMIEKRFRHLPVIDGEGNVTGLLSIAKCLYDAIQRLKKKAARAE 109
BLAST of mRNA_H-paniculata_contig46864.11669.1 vs. uniprot
Match: A0A6H5K5J8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5J8_9PHAE) HSP 1 Score: 117 bits (292), Expect = 2.290e-28 Identity = 60/103 (58.25%), Postives = 75/103 (72.82%), Query Frame = 3
Query: 3 LAHRLNPQMTFISEVMTPNPTMVRMDDDAMTCLGIMVERRFRHLPVVDGSGIIAGVLSIAKCLYDAIHRLEKKAMRAEEKAASGGDS------SDLAASFLKV 293
+A+RL+P T +SEVMTP+PT+V M D AM CLGIM+E+RFRHLPV+DG G + G+LSIAKCLYDAI RL+KKA RAE +DLAAS L++
Sbjct: 41 VANRLDPSSTTVSEVMTPHPTIVHMADSAMECLGIMIEKRFRHLPVIDGEGNVTGLLSIAKCLYDAIQRLKKKAARAENSGXXXXXXXXXXXXADLAASVLQM 143
BLAST of mRNA_H-paniculata_contig46864.11669.1 vs. uniprot
Match: D7G6N9_ECTSI (Myosin 29 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6N9_ECTSI) HSP 1 Score: 115 bits (288), Expect = 8.100e-28 Identity = 54/78 (69.23%), Postives = 66/78 (84.62%), Query Frame = 3
Query: 3 LAHRLNPQMTFISEVMTPNPTMVRMDDDAMTCLGIMVERRFRHLPVVDGSGIIAGVLSIAKCLYDAIHRLEKKAMRAE 236
+A+RL+P T +SEVMTP+PT+V M D AM CLGIM+E+RFRHLPV+DG G + G+LSIAKCLYDAI RL+KKA RAE
Sbjct: 1932 VANRLDPSSTTVSEVMTPHPTIVHMADSAMECLGIMIEKRFRHLPVIDGEGNVTGLLSIAKCLYDAIQRLKKKAARAE 2009
BLAST of mRNA_H-paniculata_contig46864.11669.1 vs. uniprot
Match: A0A7S1VMX7_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VMX7_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 3.550e-19 Identity = 50/104 (48.08%), Postives = 65/104 (62.50%), Query Frame = 3
Query: 3 LAHRLNPQMTFISEVMTPNPTMVRMDDDAMTCLGIMVERRFRHLPVVDGSGIIAGVLSIAKCLYDAIHRLE---KKAMRAEEKA------ASGGDSSDLAASFL 287
+A R+ P T + + MTPNPT VR+ D AM LGIM+E+RFRHLPVVD G + G+L IA+CL+ I +LE KK A E+A A GG S++ A L
Sbjct: 1889 VAKRMMPVSTLVQDAMTPNPTCVRLQDSAMEALGIMIEKRFRHLPVVDEHGSVVGLLDIARCLHQTIDKLERSQKKQNSAAEEALTKIIDAQGGHSANAALKSL 1992
BLAST of mRNA_H-paniculata_contig46864.11669.1 vs. uniprot
Match: A0A7S2PMW1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PMW1_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 1.560e-18 Identity = 45/83 (54.22%), Postives = 55/83 (66.27%), Query Frame = 3
Query: 3 LAHRLNPQMTFISEVMTPNPTMVRMDDDAMTCLGIMVERRFRHLPVVDGSGIIAGVLSIAKCLYDAIHRLEKKAMRAEEKAAS 251
+A + P+ T IS VMT NPT V M D AM LG MVE FRHLPVVD +G + G+L IAKCL DAI +LEK + + AA+
Sbjct: 80 VAKYIEPESTSISSVMTANPTCVAMSDSAMDALGTMVENHFRHLPVVDDNGGVVGLLDIAKCLNDAISKLEKSESKKDGNAAA 162
BLAST of mRNA_H-paniculata_contig46864.11669.1 vs. uniprot
Match: A0A7S4D9S5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D9S5_HETAK) HSP 1 Score: 84.0 bits (206), Expect = 4.340e-18 Identity = 48/98 (48.98%), Postives = 62/98 (63.27%), Query Frame = 3
Query: 3 LAHRLNPQMTFISEVMTPNPTMVRMDDDAMTCLGIMVERRFRHLPVVDGSGIIAGVLSIAKCLYDAIHRLEKKAMRAEEKAASGGDSS--DLAASFLK 290
LA L+P+ T +S+VMTP P VR+ D A+ LG M R FRHLPV+D G +AGVL IA+CL+DA+ LEK + A GGD + LA FL+
Sbjct: 41 LAQYLDPEETEVSKVMTPEPEHVRLGDPALEALGTMARRGFRHLPVLDDQGRVAGVLDIARCLHDAVAVLEKL-----QGALDGGDPTAHPLARRFLE 133
BLAST of mRNA_H-paniculata_contig46864.11669.1 vs. uniprot
Match: A0A7R9VL18_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VL18_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 2.800e-17 Identity = 44/88 (50.00%), Postives = 57/88 (64.77%), Query Frame = 3
Query: 3 LAHRLNPQMTFISEVMTPNPTMVRMDDDAMTCLGIMVERRFRHLPVVDGSGIIAGVLSIAKCLYDAIHRLEKKAMRAEEKAASGGDSS 266
+A ++P T +S VMT +PT V M D AM L MVE FRHLPVVD +G + G+L IAKCL DAI +LE RA+EK+ S + +
Sbjct: 86 VAKHVDPSSTSVSAVMTASPTCVSMTDSAMDALATMVENHFRHLPVVDDNGAVVGLLDIAKCLNDAISKLE----RAQEKSGSAAEDA 169
BLAST of mRNA_H-paniculata_contig46864.11669.1 vs. uniprot
Match: A0A7S0GJB2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GJB2_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 3.410e-17 Identity = 41/86 (47.67%), Postives = 57/86 (66.28%), Query Frame = 3
Query: 3 LAHRLNPQMTFISEVMTPNPTMVRMDDDAMTCLGIMVERRFRHLPVVDGSGIIAGVLSIAKCLYDAIHRLEKKAMRAEEKAASGGD 260
+A RL+ + VMTPNPT V M D AM+ L IMV+ FRHLPV++ G I G+L IAKCL DAI +LE R+++K+++ +
Sbjct: 66 VAQRLDASSAIVEMVMTPNPTCVTMSDSAMSALSIMVDNHFRHLPVLNDLGAIVGLLDIAKCLNDAISKLE----RSQDKSSNAAE 147
BLAST of mRNA_H-paniculata_contig46864.11669.1 vs. uniprot
Match: B7G2M6_PHATC (Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G2M6_PHATC) HSP 1 Score: 84.7 bits (208), Expect = 4.060e-17 Identity = 45/88 (51.14%), Postives = 54/88 (61.36%), Query Frame = 3
Query: 3 LAHRLNPQMTFISEVMTPNPTMVRMDDDAMTCLGIMVERRFRHLPVVDGSGIIAGVLSIAKCLYDAIHRLEKKAMRAEEKAASGGDSS 266
+A ++ T +SEVMTPNPT V M D AM L MVE FRHLPVVD G + G+L IAKCL DAI +LE R EK S + +
Sbjct: 62 VAKHIDTSATSVSEVMTPNPTCVAMSDSAMDALTTMVENHFRHLPVVDDQGSVVGLLDIAKCLNDAISKLE----RTSEKTNSAAEDA 145
BLAST of mRNA_H-paniculata_contig46864.11669.1 vs. uniprot
Match: A0A7R9VME7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VME7_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 4.910e-17 Identity = 44/88 (50.00%), Postives = 57/88 (64.77%), Query Frame = 3
Query: 3 LAHRLNPQMTFISEVMTPNPTMVRMDDDAMTCLGIMVERRFRHLPVVDGSGIIAGVLSIAKCLYDAIHRLEKKAMRAEEKAASGGDSS 266
+A ++P T +S VMT +PT V M D AM L MVE FRHLPVVD +G + G+L IAKCL DAI +LE RA+EK+ S + +
Sbjct: 421 VAKHVDPSSTSVSAVMTASPTCVSMTDSAMDALATMVENHFRHLPVVDDNGAVVGLLDIAKCLNDAISKLE----RAQEKSGSAAEDA 504 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig46864.11669.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig46864.11669.1 >prot_H-paniculata_contig46864.11669.1 ID=prot_H-paniculata_contig46864.11669.1|Name=mRNA_H-paniculata_contig46864.11669.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=92bp MTFISEVMTPNPTMVRMDDDAMTCLGIMVERRFRHLPVVDGSGIIAGVLSback to top mRNA from alignment at H-paniculata_contig46864:85..933- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig46864.11669.1 ID=mRNA_H-paniculata_contig46864.11669.1|Name=mRNA_H-paniculata_contig46864.11669.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=849bp|location=Sequence derived from alignment at H-paniculata_contig46864:85..933- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig46864:85..933- >mRNA_H-paniculata_contig46864.11669.1 ID=mRNA_H-paniculata_contig46864.11669.1|Name=mRNA_H-paniculata_contig46864.11669.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=552bp|location=Sequence derived from alignment at H-paniculata_contig46864:85..933- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |