prot_H-paniculata_contig4672.11643.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4672.11643.1
Unique Nameprot_H-paniculata_contig4672.11643.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length269
Homology
BLAST of mRNA_H-paniculata_contig4672.11643.1 vs. uniprot
Match: D8LKD0_ECTSI (SsrA-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKD0_ECTSI)

HSP 1 Score: 220 bits (560), Expect = 1.600e-69
Identity = 107/144 (74.31%), Postives = 127/144 (88.19%), Query Frame = 0
Query:  125 NRKAFRNYEILEKMEAGIELVGSEVKSCRDSRISLDEGFAQAKNGECYLYGVHIAQCSNTNRFDQHEPKRPRRLLLHKREISKIQDKIGQKGLTVVPLKLYFNDKNRLKVEIALAQGKNVRDKRDDIKARDVKRDLNRIVKQAY 268
            +RKA RNYEILEK  AGIELVGSEVKSCR S+I++DEGFAQAK G+C+L+G+HIA+C  +NRF QHEP+RPRRLLLHKREI K++DK+ QKG+TVVPLK++F+D NRLKVEI LA GKNVRDKR+DIKARD KRD+ RI K AY
Sbjct:    3 HRKARRNYEILEKFVAGIELVGSEVKSCRMSKINMDEGFAQAKKGQCFLHGIHIAECGVSNRFYQHEPRRPRRLLLHKREIKKLEDKVAQKGMTVVPLKIFFDDNNRLKVEIGLALGKNVRDKREDIKARDAKRDIQRISKNAY 146          
BLAST of mRNA_H-paniculata_contig4672.11643.1 vs. uniprot
Match: A0A835YRQ5_9STRA (Small protein B n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRQ5_9STRA)

HSP 1 Score: 197 bits (502), Expect = 1.110e-58
Identity = 98/154 (63.64%), Postives = 120/154 (77.92%), Query Frame = 0
Query:  112 DKKRSGPYKVIANNRKAFRNYEILEKMEAGIELVGSEVKSCRDSRISLDEGFAQAKNGECYLYGVHIAQCSNTNRFDQHEPKRPRRLLLHKREISKIQDKIGQKGLTVVPLKLYFNDKNRLKVEIALAQGKNVRDKRDDIKARDVKRDLNRIVK 265
            D  + GP+KVIA N++A+RNYEILE  EAGIEL+G+EVKS R  R S+DEG+A AK GEC L+GVHIA  + +N +DQHE KRPRRLLLHKREI +++D   + G T VPL LYFN KN LK+ +ALA+GKN RDKRDDI+ R+ KRDL R VK
Sbjct:   13 DASKDGPFKVIAKNKQAYRNYEILETFEAGIELLGTEVKSARGGRCSIDEGYAAAKRGECVLHGVHIAPYATSNAYDQHEAKRPRRLLLHKREIKRLEDMTTRAGYTAVPLTLYFNHKNLLKISVALARGKNERDKRDDIQQREAKRDLQRAVK 166          
BLAST of mRNA_H-paniculata_contig4672.11643.1 vs. uniprot
Match: A0A7S2S2L9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2L9_9STRA)

HSP 1 Score: 167 bits (423), Expect = 1.100e-48
Identity = 81/149 (54.36%), Postives = 110/149 (73.83%), Query Frame = 0
Query:  119 YKVIANNRKAFRNYEILEKMEAGIELVGSEVKSCRDSRISLDEGFAQAKNGECYLYGVHIAQCSNTNRFDQHEPKRPRRLLLHKREISKIQDKIGQKGLTVVPLKLYFNDKNRLKVEIALAQGKNVRDKRDDIKARDVKRDLNRIVKQA 267
            Y+V + N++A RNYE LE++EAGI LVG+EVK+ RD RI + +GFAQ K GEC+L  VHI    ++  F QHE +R R+LLLHK +I K   ++  K LT+VP+K YFN+ NRLK+++ALA+GKN RDKR+DI+ RD  R+L R +K A
Sbjct:    2 YRVFSVNKQARRNYEFLEELEAGISLVGTEVKAIRDGRIDMTDGFAQVKKGECWLKNVHIGPDKSSGPFFQHEARRERKLLLHKNQIRKFNQEVRMKQLTIVPVKAYFNEDNRLKIQLALARGKNTRDKREDIRRRDASRELKRAIKTA 150          
BLAST of mRNA_H-paniculata_contig4672.11643.1 vs. uniprot
Match: A0A7S2S2R4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2R4_9STRA)

HSP 1 Score: 168 bits (426), Expect = 4.200e-48
Identity = 81/149 (54.36%), Postives = 111/149 (74.50%), Query Frame = 0
Query:  119 YKVIANNRKAFRNYEILEKMEAGIELVGSEVKSCRDSRISLDEGFAQAKNGECYLYGVHIAQCSNTNRFDQHEPKRPRRLLLHKREISKIQDKIGQKGLTVVPLKLYFNDKNRLKVEIALAQGKNVRDKRDDIKARDVKRDLNRIVKQA 267
            Y+V++ N++A RNYE LE++EAGI LVG+EVK+ RD RI + +GFAQ K GEC+L  VHI    ++  F QHE +R R+LLLHK +I K   ++  K LT+VP+K YFN+ NRLK+++ALA+GKN RDKR+DI+ RD  R+L R +K A
Sbjct:   80 YRVVSVNKQARRNYEFLEELEAGISLVGTEVKAIRDGRIDMTDGFAQVKKGECWLKNVHIGPDKSSGPFFQHEARRERKLLLHKNQIRKFNQEVRMKQLTIVPVKAYFNEDNRLKIQLALARGKNTRDKREDIRRRDASRELKRAIKTA 228          
BLAST of mRNA_H-paniculata_contig4672.11643.1 vs. uniprot
Match: A0A7C6AJU1_9BACT (SsrA-binding protein n=1 Tax=Candidatus Aminicenantes bacterium TaxID=2052149 RepID=A0A7C6AJU1_9BACT)

HSP 1 Score: 164 bits (415), Expect = 1.560e-47
Identity = 80/147 (54.42%), Postives = 115/147 (78.23%), Query Frame = 0
Query:  120 KVIANNRKAFRNYEILEKMEAGIELVGSEVKSCRDSRISLDEGFAQAKNGECYLYGVHIAQCSNTNRFDQHEPKRPRRLLLHKREISKIQDKIGQKGLTVVPLKLYFNDKNRLKVEIALAQGKNVRDKRDDIKARDVKRDLNRIVKQ 266
            K++A N+KAF NY++LEK+EAGI L+GSEVKS R+ R+SL E FA+ +NGE YL   HI+     NRF+ HEP+RPR+LLLHK+EI ++  KI +KGLT++P K+YF +K ++K+EIALA+GK   +K++ IKARDV+R++   +K+
Sbjct:    2 KIVAENKKAFFNYDLLEKLEAGISLLGSEVKSIREGRVSLKESFAEIRNGEVYLLNCHISPYEAANRFN-HEPRRPRKLLLHKQEIKRLTGKIKEKGLTLIPTKVYFKEKGKVKIEIALARGKRAFEKKEAIKARDVEREVRAEMKR 147          
BLAST of mRNA_H-paniculata_contig4672.11643.1 vs. uniprot
Match: A0A7S3EVW1_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3EVW1_9EUKA)

HSP 1 Score: 165 bits (418), Expect = 2.080e-47
Identity = 84/151 (55.63%), Postives = 113/151 (74.83%), Query Frame = 0
Query:  115 RSGPYKVIANNRKAFRNYEILEKMEAGIELVGSEVKSCRDSRISLDEGFAQAKNGECYLYGVHIAQCSNTNRFDQHEPKRPRRLLLHKREISKIQDKIGQKGLTVVPLKLYFNDKNRLKVEIALAQGKNVRDKRDDIKARDVKRDLNRIVK 265
            ++ P K +A NR A RNYEIL+  EAGI L+G+EVKSCR +++ L +G+ + K+GEC+L  VHIA+   T  F QHE  RPRRLLLHKREI K++ +  Q+GLT+VPL+ YFN++NR+KVEI LA+GK   DKR  IK RD KR+++R +K
Sbjct:   41 KASPSKQVAVNRLARRNYEILDDFEAGISLLGTEVKSCRANQMQLRDGYCRIKDGECWLMNVHIAKHGTTGAFFQHEETRPRRLLLHKREIRKLEKESEQRGLTIVPLRCYFNEQNRMKVEIGLAKGKKNEDKRATIKERDQKREISRQLK 191          
BLAST of mRNA_H-paniculata_contig4672.11643.1 vs. uniprot
Match: A0A0H2SF71_9BACT (SsrA-binding protein n=5 Tax=Marinitoga TaxID=160798 RepID=A0A0H2SF71_9BACT)

HSP 1 Score: 162 bits (409), Expect = 1.210e-46
Identity = 82/146 (56.16%), Postives = 110/146 (75.34%), Query Frame = 0
Query:  120 KVIANNRKAFRNYEILEKMEAGIELVGSEVKSCRDSRISLDEGFAQAKNGECYLYGVHIAQCSNTNRFDQHEPKRPRRLLLHKREISKIQDKIGQKGLTVVPLKLYFNDKNRLKVEIALAQGKNVRDKRDDIKARDVKRDLNRIVK 265
            K+I NN+ A   Y ILEK EAGIEL GSEVKS R+SR++L + F + + GE YLY  HI+Q  N + F+ H+P+RPRRLL+HK EI K+  K+ +KGLT+VPLK+YFN+K R+KVEIAL +GK + DKR+DI  RD++R L + +K
Sbjct:    2 KIITNNKHATYQYHILEKYEAGIELRGSEVKSLRESRVNLKDAFCKIEKGEIYLYNAHISQYKNASLFN-HDPERPRRLLMHKYEILKLDQKVKEKGLTIVPLKMYFNEKGRVKVEIALVKGKKLYDKREDIAKRDLERRLRKNLK 146          
BLAST of mRNA_H-paniculata_contig4672.11643.1 vs. uniprot
Match: A0A7C2C535_9BACT (SsrA-binding protein n=2 Tax=Candidatus Aminicenantes bacterium TaxID=2052149 RepID=A0A7C2C535_9BACT)

HSP 1 Score: 161 bits (407), Expect = 2.500e-46
Identity = 81/147 (55.10%), Postives = 112/147 (76.19%), Query Frame = 0
Query:  120 KVIANNRKAFRNYEILEKMEAGIELVGSEVKSCRDSRISLDEGFAQAKNGECYLYGVHIAQCSNTNRFDQHEPKRPRRLLLHKREISKIQDKIGQKGLTVVPLKLYFNDKNRLKVEIALAQGKNVRDKRDDIKARDVKRDLNRIVKQ 266
            K++A N+KAF NYEILEK+EAGI L+GSEVKS R+ RISL E F   K+GE YL   HI+     NRF+ H+P RPR+LLLH++EI ++  KI +KGLT++P ++Y NDK ++KVEIALA+GK   +K++ IKARD++R+L   +K+
Sbjct:    2 KIVAENKKAFFNYEILEKLEAGISLLGSEVKSIREGRISLKESFVDIKDGEVYLLNCHISPYEAANRFN-HDPLRPRKLLLHRQEIKRLTGKIKEKGLTLIPTRIYLNDKGKVKVEIALARGKRAYEKKEAIKARDLERELRAEMKR 147          
BLAST of mRNA_H-paniculata_contig4672.11643.1 vs. uniprot
Match: UPI000411B2DE (SsrA-binding protein SmpB n=1 Tax=Desulfovibrio aminophilus TaxID=81425 RepID=UPI000411B2DE)

HSP 1 Score: 158 bits (400), Expect = 3.740e-45
Identity = 81/147 (55.10%), Postives = 108/147 (73.47%), Query Frame = 0
Query:  120 KVIANNRKAFRNYEILEKMEAGIELVGSEVKSCRDSRISLDEGFAQAKNGECYLYGVHIAQCSNTNRFDQHEPKRPRRLLLHKREISKIQDKIGQKGLTVVPLKLYFNDKNRLKVEIALAQGKNVRDKRDDIKARDVKRDLNRIVKQ 266
            K IA NR A R YE+ E +EAG+ L GSEVKS RD R+S  +G+   KNGE +L GVHIA    T+ FD+ +P+RPR+LLLH+REI ++Q K  QKGLT+VP++LYF  + R+K+EIALA+GK V D+RDD+K +D+ RD  R + Q
Sbjct:   11 KPIAENRNARRLYELTETLEAGLALQGSEVKSLRDGRVSFKDGYVDVKNGEAFLVGVHIAPYEKTSLFDRPDPERPRKLLLHRREIDRLQAKAEQKGLTIVPVRLYFT-RGRVKLEIALAKGKKVHDRRDDLKQKDIARDTARQLAQ 156          
BLAST of mRNA_H-paniculata_contig4672.11643.1 vs. uniprot
Match: UPI0003B72AAA (SsrA-binding protein SmpB n=1 Tax=Paucidesulfovibrio longus TaxID=889 RepID=UPI0003B72AAA)

HSP 1 Score: 157 bits (398), Expect = 7.950e-45
Identity = 78/143 (54.55%), Postives = 107/143 (74.83%), Query Frame = 0
Query:  120 KVIANNRKAFRNYEILEKMEAGIELVGSEVKSCRDSRISLDEGFAQAKNGECYLYGVHIAQCSNTNRFDQHEPKRPRRLLLHKREISKIQDKIGQKGLTVVPLKLYFNDKNRLKVEIALAQGKNVRDKRDDIKARDVKRDLNR 262
            K I  N++A R YE LE  EAG+ LVGSEVKS R+ R++  +G+ + K+GE +L GVHIA   +T  +DQH+P+RPR+LLLHK EI ++Q ++ QKGLTV+P+ +YF    R+K+EIAL +GKNV D+RDD+KARD+ RD  R
Sbjct:   14 KTIGVNKQARRLYEFLETFEAGLSLVGSEVKSLREGRVAFKDGYVRLKDGEAWLVGVHIAPWDHTGPYDQHDPERPRKLLLHKHEIERLQARVDQKGLTVIPVSMYFRG-GRVKLEIALGRGKNVHDRRDDLKARDMARDTAR 155          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4672.11643.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKD0_ECTSI1.600e-6974.31SsrA-binding protein n=1 Tax=Ectocarpus siliculosu... [more]
A0A835YRQ5_9STRA1.110e-5863.64Small protein B n=1 Tax=Tribonema minus TaxID=3033... [more]
A0A7S2S2L9_9STRA1.100e-4854.36Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2S2R4_9STRA4.200e-4854.36Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7C6AJU1_9BACT1.560e-4754.42SsrA-binding protein n=1 Tax=Candidatus Aminicenan... [more]
A0A7S3EVW1_9EUKA2.080e-4755.63Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A0H2SF71_9BACT1.210e-4656.16SsrA-binding protein n=5 Tax=Marinitoga TaxID=1607... [more]
A0A7C2C535_9BACT2.500e-4655.10SsrA-binding protein n=2 Tax=Candidatus Aminicenan... [more]
UPI000411B2DE3.740e-4555.10SsrA-binding protein SmpB n=1 Tax=Desulfovibrio am... [more]
UPI0003B72AAA7.950e-4554.55SsrA-binding protein SmpB n=1 Tax=Paucidesulfovibr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000037SsrA-binding proteinPFAMPF01668SmpBcoord: 122..266
e-value: 6.8E-55
score: 184.9
IPR000037SsrA-binding proteinTIGRFAMTIGR00086TIGR00086coord: 121..265
e-value: 1.9E-52
score: 175.2
IPR000037SsrA-binding proteinPANTHERPTHR30308TMRNA-BINDING COMPONENT OF TRANS-TRANSLATION TAGGING COMPLEXcoord: 116..267
IPR000037SsrA-binding proteinHAMAPMF_00023SmpBcoord: 113..268
score: 53.701
IPR023620Small protein BGENE3D2.40.280.10coord: 115..244
e-value: 4.5E-46
score: 157.9
IPR023620Small protein BSUPERFAMILY74982Small protein B (SmpB)coord: 116..247
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 39..61
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 62..268
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..38
NoneNo IPR availablePRODOMPD004488coord: 122..247
e-value: 5.0E-25
score: 284.0
NoneNo IPR availableTMHMMTMhelixcoord: 39..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4672contigH-paniculata_contig4672:2116..13432 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4672.11643.1mRNA_H-paniculata_contig4672.11643.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4672 1448..13593 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4672.11643.1 ID=prot_H-paniculata_contig4672.11643.1|Name=mRNA_H-paniculata_contig4672.11643.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=269bp
MCVVCETQTSVLYLRPGQWGFVMAASDGGRRSQGLSASAWTSLLLGAAVL
FSMYLTASGFVRCLSGGGRADVAARRARGPRLSTKSQGIGMLGVLDRRRK
GRCSVQMNAGGDKKRSGPYKVIANNRKAFRNYEILEKMEAGIELVGSEVK
SCRDSRISLDEGFAQAKNGECYLYGVHIAQCSNTNRFDQHEPKRPRRLLL
HKREISKIQDKIGQKGLTVVPLKLYFNDKNRLKVEIALAQGKNVRDKRDD
IKARDVKRDLNRIVKQAY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000037SsrA-bd_prot
IPR023620SmpB