mRNA_H-paniculata_contig46710.11641.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig46710.11641.1
Unique NamemRNA_H-paniculata_contig46710.11641.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig46710.11641.1 vs. uniprot
Match: A0A6H5K2M6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2M6_9PHAE)

HSP 1 Score: 181 bits (458), Expect = 1.970e-48
Identity = 105/245 (42.86%), Postives = 146/245 (59.59%), Query Frame = 1
Query:   31 LEKWRSDSGATYHMTCFPEYMSNLRPSSDKIRVGGGRLLDIENYGTLTIVLESEGGNATVMLRDVAYVPQLRLNLFSLKAAQKRGEM--YVPHTDGRISLFDGKLSFPG-DGTGNSFWGYRVESTRDAVALPVLAPGSATPRITKMNINEFHCLYGHAHEYLLRQTAHSLGVELQGELKSCNGCSMAKGYRKPIPHSTNTRAAKKLGRVFVDLSGPKKVPSLTGKRYAMVVKDDFSRFAWVYFLE 756
            +E W +D+G  +HMT     M +L+P    ++  GG   +IE  GTL +V  +      V L +V Y P L  NLFS  +A+  GE   Y+   DG ++ F+G ++F   DG   S   YR+E+      L  L P +     +KM++NEFH +Y H+HE LLR TA  LG+EL G++ +C GCSM+K ++K I H T  R+ KKLGRVFVDL G K V S+ GK Y M+VKDDF+R  W+YFL+
Sbjct:  428 VEDWYADTGTAFHMTDRLSCMKDLKPCHKNVKGIGGVTCEIEFSGTLELVFVTADSQFPVELENVLYSPNLGYNLFS-PSAEFDGESWNYLGGPDGVMTAFNGHVTFQNLDGMLISP-AYRLENNCVGSVLAALTPSNPKHE-SKMDVNEFHNIYAHSHEGLLRTTAKRLGIELTGKMHACTGCSMSKAFKKGIAHETKCRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRTWMYFLK 669          
BLAST of mRNA_H-paniculata_contig46710.11641.1 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE)

HSP 1 Score: 173 bits (438), Expect = 1.410e-45
Identity = 100/244 (40.98%), Postives = 139/244 (56.97%), Query Frame = 1
Query:   31 LEKWRSDSGATYHMTCFPEYMSNLRPSSDKIRVGGGRLLDIENYGTLTIVLESEGGNATVMLRDVAYVPQLRLNLFSLKAAQKRGEMY--VPHTDGRISLFDGKLSFPGDGTGNSFWGYRVESTRDAVALPVLAPGSATPRITKMNINEFHCLYGHAHEYLLRQTAHSLGVELQGELKSCNGCSMAKGYRKPIPHSTNTRAAKKLGRVFVDLSGPKKVPSLTGKRYAMVVKDDFSRFAWVYFLE 756
            +E W +D+G  +HMT     M +L+P    +   GG   +I   GTL +V  +     +V L++V Y P L  NLFS  +A+  GE +  +   DG ++ F G+++F           YR+        L  L P +   + T M++NEFH +Y H+H+ LLR TA  LG EL GE+  C GCSMAK  +K I   T +R+ KKLGRVFVDL G K V S+ GK Y M+VKDDF+R AW+YFL+
Sbjct:  229 VEDWYADTGTAFHMTDSLACMKDLKPCHKSVNGIGGVSCEISFSGTLELVFVTADSEFSVELKNVLYSPNLGYNLFS-PSAEFDGESWNGLGGPDGVMTAFKGQVTFQNFDGMLIASAYRLGEASVGTVLAALTPSNPKHKTT-MDVNEFHNIYAHSHKGLLRTTAKRLGTELVGEMHECTGCSMAKAVKKGIARETKSRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRAWMYFLK 470          
BLAST of mRNA_H-paniculata_contig46710.11641.1 vs. uniprot
Match: A0A6H5JBA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBA7_9PHAE)

HSP 1 Score: 172 bits (435), Expect = 3.530e-45
Identity = 99/244 (40.57%), Postives = 139/244 (56.97%), Query Frame = 1
Query:   31 LEKWRSDSGATYHMTCFPEYMSNLRPSSDKIRVGGGRLLDIENYGTLTIVLESEGGNATVMLRDVAYVPQLRLNLFSLKAAQKRGEMY--VPHTDGRISLFDGKLSFPGDGTGNSFWGYRVESTRDAVALPVLAPGSATPRITKMNINEFHCLYGHAHEYLLRQTAHSLGVELQGELKSCNGCSMAKGYRKPIPHSTNTRAAKKLGRVFVDLSGPKKVPSLTGKRYAMVVKDDFSRFAWVYFLE 756
            +E W +D+G  +HMT     M +L+P    +   GG   +I   GTL +V  +     ++ L++V Y P L  NLFS  +A+  GE +  +   DG ++ F G+++F           YR+        L  L P +   + T M++NEFH +Y H+H+ LLR TA  LG EL GE+  C GCSMAK  +K I   T +R+ KKLGRVFVDL G K V S+ GK Y M+VKDDF+R AW+YFL+
Sbjct:  522 VEDWYADTGTAFHMTDSLACMKDLKPCHKSVNGIGGVSCEISFSGTLELVFVTADSEFSMELKNVLYSPNLGYNLFS-PSAEFDGESWNGLGGPDGVMTAFKGQVTFQNFDGMLIASAYRLGEASVGTVLAALTPSNPKHKTT-MDVNEFHNIYAHSHKGLLRTTAKRLGTELVGEMHECTGCSMAKAVKKGIARETKSRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRAWMYFLK 763          
BLAST of mRNA_H-paniculata_contig46710.11641.1 vs. uniprot
Match: A0A6H5JH25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH25_9PHAE)

HSP 1 Score: 171 bits (433), Expect = 6.580e-45
Identity = 96/243 (39.51%), Postives = 140/243 (57.61%), Query Frame = 1
Query:   31 LEKWRSDSGATYHMTCFPEYMSNLRPSSDKIRVGGGRLLDIENYGTLTIVLESEGGNATVMLRDVAYVPQLRLNLFSLKAAQKRGEMY--VPHTDGRISLFDGKLSFPGDGTGNSFWGYRVESTRDAVALPVLAPGSATPRITKMNINEFHCLYGHAHEYLLRQTAHSLGVELQGELKSCNGCSMAKGYRKPIPHSTNTRAAKKLGRVFVDLSGPKKVPSLTGKRYAMVVKDDFSRFAWVYFL 753
            +E W +D+G  ++MT     M ++ P  +K++  GG   ++   GTL +   S     +  L++V Y P+L  NLFS  +A+  GE +  +   DG ++ F G ++F           YR+        L  L P S   R+  M++N+FH +YGHAHE +LR TA  LG+EL G++ +C+GCSM K  RK I H T   + KKLGRVFV+L G K V S+ GK Y M++KDDF+R AW+YFL
Sbjct:  249 IEDWYADTGTAFNMTDSLSCMKDVNPCHNKVKGIGGVTCEVALSGTLEVAFVSADSEFSAELKNVLYAPKLGYNLFS-PSAEFDGESWNGLGGPDGVMTAFHGHVTFQNFDGMLVATAYRLGHNSIGSVLAALTP-SNPKRVKIMDVNDFHNIYGHAHEGMLRTTAKRLGIELTGKMHACSGCSMGKAIRKAIAHVTTNSSDKKLGRVFVNLGGKKGVASIGGKHYPMILKDDFTRRAWMYFL 489          
BLAST of mRNA_H-paniculata_contig46710.11641.1 vs. uniprot
Match: A0A6H5JV76_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV76_9PHAE)

HSP 1 Score: 162 bits (410), Expect = 7.620e-43
Identity = 94/244 (38.52%), Postives = 136/244 (55.74%), Query Frame = 1
Query:   31 LEKWRSDSGATYHMTCFPEYMSNLRPSSDKIRVGGGRLLDIENYGTLTIVLESEGGNATVMLRDVAYVPQLRLNLFSLKAAQKRGEMY--VPHTDGRISLFDGKLSFPGDGTGNSFWGYRVESTRDAVALPVLAPGSATPRITKMNINEFHCLYGHAHEYLLRQTAHSLGVELQGELKSCNGCSMAKGYRKPIPHSTNTRAAKKLGRVFVDLSGPKKVPSLTGKRYAMVVKDDFSRFAWVYFLE 756
            +E W +D+G  +HMT     M +L+P    +   G    ++   GTL +V  +     +V L++V Y   L  N+FS  +A+  GE +      DG ++ F+G+++F           YR+        L  L P +     T M+INEFH +Y H+HE LLR TA  LG +L G++ +C+GCSM+K  RK I   T  R+ KKLGRVFVDL G K + S+ GK Y M+VKDDF+R  W+YFL+
Sbjct:  110 VEDWYADTGTAFHMTDSLSCMKDLKPCHKSVNGIGSVSCEVAFSGTLELVFVTADSEFSVELKNVLYSQNLGYNIFS-PSAEFDGESWNGPGGPDGVMTAFNGQVTFQNFDGMLIASAYRLGEASVGTVLAALTPANPKHETT-MDINEFHNIYAHSHEGLLRTTAKRLGTKLVGDMHACSGCSMSKAIRKGIVRETKRRSDKKLGRVFVDLGGRKDIASVGGKHYPMIVKDDFTRRTWMYFLK 351          
BLAST of mRNA_H-paniculata_contig46710.11641.1 vs. uniprot
Match: A0A6H5L175_9PHAE (Uncharacterized protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L175_9PHAE)

HSP 1 Score: 164 bits (416), Expect = 1.280e-42
Identity = 99/251 (39.44%), Postives = 142/251 (56.57%), Query Frame = 1
Query:   13 QVQVDGLEKWRSDSGATYHMTCFPEYMSNLRPSSDKIRVGGGRLLDIENYGTLTIVLESEGGNATVMLRDVAYVPQLRLNLFSLKAAQKRGEMYVPHTDGRI-SLFDGK-LSFPGDGTGNSFWGYRVESTRDAVALPVLAPGSATPRITKMNINEFHCLYGHAHEYLLRQTAHSLGVELQG-ELKSCNGCSMAKGYRKPIPHSTNTRAAKKLGRVFVDLSGPKKVPSLTGKRYAMVVKDDFSRFAWVYFLE 756
            + Q  G+ ++ +DSGAT  M    +   N +  + +++  GG  L I  YG +T+VL+SEG    V ++  A+VP + LNL SL +  + G  Y     G + +   GK + FP  G   S WGY+ E   D     ++ PG A    T  ++NEFH  +GHAHE LLR TA   GVEL G  L SC GCSMAKG  K +   T+TRA KKL RVF+DL G  +  S+ G+ Y ++++ D +R+  V+FL+
Sbjct:  550 EEQGQGVMRYVADSGATCSMFRSADGFKNYQECNRRVKGIGGEFLRILGYGDVTVVLQSEGQEVPVPIKRAAHVPGMDLNLISLTSLTEEGHTYAGKPGGLVLTTKAGKEVWFPQLGKLLSLWGYQTEPEVDTACAAIIVPGEAKAA-TPTDLNEFHNSHGHAHERLLRLTAKQQGVELTGGPLLSCTGCSMAKGQVKAVQRFTDTRAVKKLFRVFIDLGGRMQFHSIGGRWYTLIIRCDATRWTRVFFLK 799          
BLAST of mRNA_H-paniculata_contig46710.11641.1 vs. uniprot
Match: A0A6H5JXF7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXF7_9PHAE)

HSP 1 Score: 157 bits (397), Expect = 4.210e-40
Identity = 92/237 (38.82%), Postives = 126/237 (53.16%), Query Frame = 1
Query:   46 SDSGATYHMTCFPEYMSNLRPSSDKIRVGGGRLLDIENYGTLTIVLESEGGNATVMLRDVAYVPQLRLNLFSLKAAQKRGEMYVPHTDGRISLFDGKLSFPGDGTGNSFWGYRVESTRDAVALPVLAPGSATPRITKMNINEFHCLYGHAHEYLLRQTAHSLGVELQGELKSCNGCSMAKGYRKPIPHSTNTRAAKKLGRVFVDLSGPKKVPSLTGKRYAMVVKDDFSRFAWVYFLE 756
            +D+GAT HM    +          ++RV  G    I  YG +T+ L S GG   ++L+ VA+VP+L  NL SL +    G          + L  G           + + +    T    A   +APG A      + IN+FH  +GH+HE LLR TA   G  L GEL+ C GCS AKG  K IP+ T+TRAAK+L RVF+DLSG  +V SL GK Y ++VKD ++R+  VYFL+
Sbjct:  397 ADTGATTHMFANSDGFVRYEECDRRVRVAAGETFPIVGYGDVTVTLSSRGGTTDLLLKRVAHVPRLDYNLVSLTSLFDDGFQTKTLNKHELELERGGGESVYSPRCGNLYVHNGCRTHTEHAYTAIAPGDAKASSAPVEINDFHYAHGHSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKLIPNKTSTRAAKRLQRVFMDLSGKARVQSLVGKWYTLIVKDVYTRWNRVYFLK 633          
BLAST of mRNA_H-paniculata_contig46710.11641.1 vs. uniprot
Match: A0A6H5L3Y0_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Y0_9PHAE)

HSP 1 Score: 152 bits (383), Expect = 2.830e-38
Identity = 92/230 (40.00%), Postives = 128/230 (55.65%), Query Frame = 1
Query:   70 MTCFPEYMSNLRPSSDKIRVGGGRLLDIENYGTLTIVLESEGGNATVMLRDVAYVPQLRLNLFSLKAAQKRGEMY--VPHTDGRISLFDGKLSFPGDGTGNSFWGYRVESTRDAVALPVLAPGSATPRITKMNINEFHCLYGHAHEYLLRQTAHSLGVELQGELKSCNGCSMAKGYRKPIPHSTNTRAAKKLGRVFVDLSGPKKVPSLTGKRYAMVVKDDFSRFAWVYFL 753
            MT     M +L+P    +   GG   ++   GTL +V  +     +V L++V Y P L  NLFS  +A+  GE +  +   DG ++ F+G+++F           YR+        L  L P +     T M+INEFH +Y H+HE LLR TA  LG +L G++ +C+GCSM+K  RK I   T  R+ KKLGRVFVDL G K   S+ GK Y M+VKDDF+R  W+YFL
Sbjct:    1 MTDSLSCMKDLKPCHKSVNGIGGVSCEVAFSGTLELVFVTADSEFSVELKNVLYSPNLGYNLFS-PSAEFDGESWNGLGGPDGVMTAFNGQVTFQNFDGMLIASAYRLGEASVGTVLAALTPANPKHETT-MDINEFHNIYAHSHEGLLRTTAKRLGTKLVGDMHACSGCSMSKAIRKGIVRETKRRSDKKLGRVFVDLGGRKDSASVGGKHYPMIVKDDFTRRTWMYFL 228          
BLAST of mRNA_H-paniculata_contig46710.11641.1 vs. uniprot
Match: A0A6H5JS61_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS61_9PHAE)

HSP 1 Score: 144 bits (364), Expect = 4.500e-36
Identity = 91/244 (37.30%), Postives = 129/244 (52.87%), Query Frame = 1
Query:   37 KWRSDSGATYHMTCFPEYMSNLRPSSDKIRVGGGR-LLDIENYGTLTIVLESEGGNATVMLRDVAYVPQLRLNLFSLKAAQKRGEMYVPHTDGRISLFDG---KLSFPGDGTGNSFWGYRVESTRDAVALPVLAPGSATPRITKMNINEFHCLYGHAHEYLLRQTAHSLGVELQGELKSCNGCSMAKGYRKPIPHSTNTRAAKKLGRVFVDLSGPKKVPSLTGKRYAMVVKDDFSRFAWVYFLE 756
            ++ +D+G T HM          +  + ++RV  G     I  YG +T+ L S  G   ++L+ VA+VP+L   L  L +    G          + L  G    + FP    GN +   RV  T    A   +  G+A      +++N+FHC + H+HE LLR TA   G  L G+L+ C GCS AK   KPIP+ T+TRAAKKL RVF DLSG  +V SL GKRY ++V D+ +R+  VYFL+
Sbjct:  333 RYVADTGTTTHMFASSNGFVRYQECNRRVRVAAGENFFPIAGYGDVTVTLSSRDGTTDLLLKRVAHVPRLDYKLVFLTSLFDGGFETNTLNKHELELERGAGESVYFPR--CGNLYVQNRVR-THTEHAYTAIVSGNAKASSAPVDVNDFHCTHDHSHEVLLRTTAKQKGTTLVGKLRECLGCSTAKRLSKPIPNKTSTRAAKKLQRVFADLSGKARVESLGGKRYTVIVWDENTRWNHVYFLK 573          
BLAST of mRNA_H-paniculata_contig46710.11641.1 vs. uniprot
Match: A0A6H5LL52_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL52_9PHAE)

HSP 1 Score: 132 bits (333), Expect = 8.770e-33
Identity = 83/225 (36.89%), Postives = 122/225 (54.22%), Query Frame = 1
Query:   97 NLRPSSDKIRVGGGRLLDIE--NYGTLTIVLESEGGNATVMLRDVAYVPQLRLNLFSLKAAQKRGEMYVPHTDGRI--SLFDGKLSFPGDGTGNSFWGYRVESTRDAVALPVLAPGSATPRITKMNINEFHCLYGHAHEYLLRQTAHSLGVELQG-ELKSCNGCSMAKGYRKPIPHSTNTRAAKKLGRVFVDLSGPKKVPSLTGKRYAMVVKDDFSRFAWVYFLE 756
            N R  S  ++  GG    +    YG +T+V  +EGG   V++ + A+VP+   NL SL A  + G  Y     G    +   GK+ FP  G   +  GY++E   D      + PG A    T  ++N  H  +GH HE LL++TA   GV+L G  L  C GCSM+KG  KPI  ST+TRAA KL R+F++L G  +  S+ G  Y ++++DD +R+  V+FL+
Sbjct:   10 NYRECSGWVKGIGGNNAPVPPLGYGDVTVVFLTEGGRVPVLILNAAHVPESPHNLLSLSALAEEGHTYSGQKGGLTLTTRAGGKVWFPRPGKLLTQEGYQIEPKVDIACAATIVPGDAKAA-TPTDLNSDHNSHGHTHEELLQKTAKQQGVQLTGGPLLPCLGCSMSKGQVKPISKSTDTRAANKLFRLFLNLGGRMQFKSIGGNWYTLIIRDDCTRWTRVFFLK 233          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig46710.11641.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K2M6_9PHAE1.970e-4842.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZH7_9PHAE1.410e-4540.98Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBA7_9PHAE3.530e-4540.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JH25_9PHAE6.580e-4539.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JV76_9PHAE7.620e-4338.52Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5L175_9PHAE1.280e-4239.44Uncharacterized protein n=9 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JXF7_9PHAE4.210e-4038.82Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5L3Y0_9PHAE2.830e-3840.00Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JS61_9PHAE4.500e-3637.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LL52_9PHAE8.770e-3336.89Integrase catalytic domain-containing protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig46710contigH-paniculata_contig46710:1..756 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score99.4
Seed ortholog evalue2.6e-18
Seed eggNOG ortholog6334.EFV48956
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Encoded by
EggNOG OGs38DPC@33154,3BGB6@33208,3D5G4@33213,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelBilateria
Best eggNOG OGNA|NA|NA
Exons1
Model size756
Cds size756
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930392.4673228-CDS-H-paniculata_contig46710:0..7561622930392.4673228-CDS-H-paniculata_contig46710:0..756Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig46710 1..756 -
1691481270.9977324-CDS-H-paniculata_contig46710:0..7561691481270.9977324-CDS-H-paniculata_contig46710:0..756Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig46710 1..756 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig46710.11641.1prot_H-paniculata_contig46710.11641.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig46710 1..756 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig46710.11641.1

>prot_H-paniculata_contig46710.11641.1 ID=prot_H-paniculata_contig46710.11641.1|Name=mRNA_H-paniculata_contig46710.11641.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=252bp
IDADQVQVDGLEKWRSDSGATYHMTCFPEYMSNLRPSSDKIRVGGGRLLD
IENYGTLTIVLESEGGNATVMLRDVAYVPQLRLNLFSLKAAQKRGEMYVP
HTDGRISLFDGKLSFPGDGTGNSFWGYRVESTRDAVALPVLAPGSATPRI
TKMNINEFHCLYGHAHEYLLRQTAHSLGVELQGELKSCNGCSMAKGYRKP
IPHSTNTRAAKKLGRVFVDLSGPKKVPSLTGKRYAMVVKDDFSRFAWVYF
LE
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mRNA from alignment at H-paniculata_contig46710:1..756-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig46710.11641.1 ID=mRNA_H-paniculata_contig46710.11641.1|Name=mRNA_H-paniculata_contig46710.11641.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=756bp|location=Sequence derived from alignment at H-paniculata_contig46710:1..756- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATAGATGCGGATCAGGTTCAGGTAGATGGCCTCGAAAAATGGCGTAGTGA CAGTGGTGCTACTTACCACATGACGTGTTTCCCCGAGTACATGTCTAACC TCCGCCCCAGCAGTGATAAGATTAGAGTTGGAGGTGGTAGACTACTTGAC ATAGAAAACTATGGTACACTGACTATAGTGCTGGAAAGTGAGGGAGGAAA TGCCACAGTGATGCTTCGAGATGTTGCGTATGTTCCCCAACTACGTTTGA ACTTGTTCTCGCTAAAGGCAGCGCAGAAGCGGGGCGAGATGTATGTTCCC CACACCGATGGTAGAATTTCCTTGTTCGATGGAAAACTATCGTTCCCTGG TGACGGTACTGGTAACTCATTTTGGGGTTACAGGGTAGAGAGTACACGAG ATGCGGTCGCTTTGCCTGTTTTAGCCCCCGGTAGCGCTACACCTCGCATT ACCAAGATGAACATCAACGAGTTCCACTGTCTATATGGTCACGCACACGA GTATCTTTTGAGGCAGACAGCTCACTCTTTAGGAGTAGAACTGCAAGGCG AACTGAAATCTTGCAATGGTTGTTCCATGGCAAAAGGGTACCGCAAACCG ATCCCACATAGCACTAACACGCGTGCGGCCAAAAAGCTAGGTAGAGTCTT TGTAGACCTCAGTGGCCCCAAGAAAGTCCCATCTTTAACAGGGAAGCGTT ATGCAATGGTGGTGAAGGATGATTTTTCCAGGTTCGCGTGGGTGTATTTT CTTGAA
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Coding sequence (CDS) from alignment at H-paniculata_contig46710:1..756-

>mRNA_H-paniculata_contig46710.11641.1 ID=mRNA_H-paniculata_contig46710.11641.1|Name=mRNA_H-paniculata_contig46710.11641.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1512bp|location=Sequence derived from alignment at H-paniculata_contig46710:1..756- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATAGATGCGGATCAGGTTCAGGTAGATGGCCTCGAAAAATGGCGTAGTGA
CAGTGGTGCTACTTACCACATGACGTGTTTCCCCGAGTACATGTCTAACC
TCCGCCCCAGCAGTGATAAGATTAGAGTTGGAGGTGGTAGACTACTTGAC
ATAGAAAACTATGGTACACTGACTATAGTGCTGGAAAGTGAGGGAGGAAA
TGCCACAGTGATGCTTCGAGATGTTGCGTATGTTCCCCAACTACGTTTGA
ACTTGTTCTCGCTAAAGGCAGCGCAGAAGCGGGGCGAGATGTATGTTCCC
CACACCGATGGTAGAATTTCCTTGTTCGATGGAAAACTATCGTTCCCTGG
TGACGGTACTGGTAACTCATTTTGGGGTTACAGGGTAGAGAGTACACGAG
ATGCGGTCGCTTTGCCTGTTTTAGCCCCCGGTAGCGCTACACCTCGCATT
ACCAAGATGAACATCAACGAGTTCCACTGTCTATATGGTCACGCACACGA
GTATCTTTTGAGGCAGACAGCTCACTCTTTAGGAGTAGAACTGCAAGGCG
AACTGAAATCTTGCAATGGTTGTTCCATGGCAAAAGGGTACCGCAAACCG
ATCCCACATAGCACTAACACGCGTGCGGCCAAAAAGCTAGGTAGAGTCTT
TGTAGACCTCAGTGGCCCCAAGAAAGTCCCATCTTTAACAGGGAAGCGTT
ATGCAATGGTGGTGAAGGATGATTTTTCCAGGTTCGCGTGGGTGTATTTT
CTTGAAATAGATGCGGATCAGGTTCAGGTAGATGGCCTCGAAAAATGGCG
TAGTGACAGTGGTGCTACTTACCACATGACGTGTTTCCCCGAGTACATGT
CTAACCTCCGCCCCAGCAGTGATAAGATTAGAGTTGGAGGTGGTAGACTA
CTTGACATAGAAAACTATGGTACACTGACTATAGTGCTGGAAAGTGAGGG
AGGAAATGCCACAGTGATGCTTCGAGATGTTGCGTATGTTCCCCAACTAC
GTTTGAACTTGTTCTCGCTAAAGGCAGCGCAGAAGCGGGGCGAGATGTAT
GTTCCCCACACCGATGGTAGAATTTCCTTGTTCGATGGAAAACTATCGTT
CCCTGGTGACGGTACTGGTAACTCATTTTGGGGTTACAGGGTAGAGAGTA
CACGAGATGCGGTCGCTTTGCCTGTTTTAGCCCCCGGTAGCGCTACACCT
CGCATTACCAAGATGAACATCAACGAGTTCCACTGTCTATATGGTCACGC
ACACGAGTATCTTTTGAGGCAGACAGCTCACTCTTTAGGAGTAGAACTGC
AAGGCGAACTGAAATCTTGCAATGGTTGTTCCATGGCAAAAGGGTACCGC
AAACCGATCCCACATAGCACTAACACGCGTGCGGCCAAAAAGCTAGGTAG
AGTCTTTGTAGACCTCAGTGGCCCCAAGAAAGTCCCATCTTTAACAGGGA
AGCGTTATGCAATGGTGGTGAAGGATGATTTTTCCAGGTTCGCGTGGGTG
TATTTTCTTGAA
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