prot_H-paniculata_contig4669.11632.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4669.11632.1
Unique Nameprot_H-paniculata_contig4669.11632.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length34
Homology
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BLAST of mRNA_H-paniculata_contig4669.11632.1 vs. uniprot
Match: A0A6H5KM66_9PHAE (RWD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KM66_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 3.880e-12
Identity = 29/34 (85.29%), Postives = 32/34 (94.12%), Query Frame = 0 
Query:    1 MELEALEAIYADAFSMTSEKPLEWRIHLEPTEGG 34
            MELEALEAIYAD FS+ SEKPLEW++HLEPTEGG
Sbjct:   14 MELEALEAIYADLFSIVSEKPLEWKVHLEPTEGG 47
[Close]
BLAST of mRNA_H-paniculata_contig4669.11632.1 vs. uniprot
Match: A0A7S2Y3E8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y3E8_9STRA)

HSP 1 Score: 47.8 bits (112), Expect = 6.750e-6
Identity = 22/33 (66.67%), Postives = 26/33 (78.79%), Query Frame = 0 
Query:    1 MELEALEAIYADAFSMTSEKPLEWRIHLEPTEG 33
            ME+EALEAIY D FS TSE PLE+++ LEP  G
Sbjct:   32 MEVEALEAIYVDEFSKTSEDPLEFKLFLEPFPG 64
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4669.11632.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KM66_9PHAE3.880e-1285.29RWD domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S2Y3E8_9STRA6.750e-666.67Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10coord: 1..34
e-value: 1.1E-7
score: 33.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4669contigH-paniculata_contig4669:10152..10253 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4669.11632.1mRNA_H-paniculata_contig4669.11632.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4669 10131..10253 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4669.11632.1 ID=prot_H-paniculata_contig4669.11632.1|Name=mRNA_H-paniculata_contig4669.11632.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=34bp
MELEALEAIYADAFSMTSEKPLEWRIHLEPTEGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016135UBQ-conjugating_enzyme/RWD