mRNA_H-paniculata_contig11816.1162.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig11816.1162.1 vs. uniprot
Match: D7FLM7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLM7_ECTSI) HSP 1 Score: 244 bits (623), Expect = 3.230e-71 Identity = 125/173 (72.25%), Postives = 130/173 (75.14%), Query Frame = 1 Query: 1 KANLEHLRDNHRKALKLLASCHGFQGAEEYSGPGEAVGPPYFNNMGCLHHKLRRHHVALHYFQKALLSLGRGATLAASASKEXXXXXXXXXXXXXXDAXXXRGRAGGVGHPSADGHVFPAPACEVLYNTGLQLLLTENPQAALRCFERAALLFHNRPRLWLRMAECSIADHLL 519 KANLE+LRDNHRKALKLLASCHGFQGAEEYSGPGEAVGPPYFNNMGCLHHKL+RHHVALHYFQKAL +LG+G A E GR GG DGHV PAP CEVLYNTGLQLLLTE P+ ALRCFERAALLFHNRP LWLRMAECSIA H L Sbjct: 343 KANLEYLRDNHRKALKLLASCHGFQGAEEYSGPGEAVGPPYFNNMGCLHHKLKRHHVALHYFQKALEALGKGGEAGADVGGEAAAA----------------GRGGGK-----DGHVSPAPTCEVLYNTGLQLLLTEKPEEALRCFERAALLFHNRPHLWLRMAECSIARHRL 494
BLAST of mRNA_H-paniculata_contig11816.1162.1 vs. uniprot
Match: A0A836CBQ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBQ7_9STRA) HSP 1 Score: 182 bits (462), Expect = 8.000e-49 Identity = 94/168 (55.95%), Postives = 108/168 (64.29%), Query Frame = 1 Query: 1 KANLEHLRDNHRKALKLLASCHGFQGAEEYSGPGEAVGPPYFNNMGCLHHKLRRHHVALHYFQKALLSLGRGATLAASASKEXXXXXXXXXXXXXXDAXXXRGRAGGVGHPSADGHVFPAPACEVLYNTGLQLLLTENPQAALRCFERAALLFHNRPRLWLRMAECSI 504 KANLE+LRDN++KALKLLASCHGFQG+EEY+GPGE GP Y NNMGCLHHKL +HH ALHYF KAL ++ G A+ + DG V ACE+LYN GLQLLLT P ALRC ERAALLF+NRPRLWLRMAE ++ Sbjct: 367 KANLEYLRDNYKKALKLLASCHGFQGSEEYAGPGEPAGPHYHNNMGCLHHKLGKHHAALHYFNKALAAVADGMRAGATGALACGA--------------------------ERDGRVAGGIACEILYNAGLQLLLTAQPAPALRCLERAALLFYNRPRLWLRMAEAAL 508
BLAST of mRNA_H-paniculata_contig11816.1162.1 vs. uniprot
Match: A0A6H5J7B5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7B5_9PHAE) HSP 1 Score: 153 bits (387), Expect = 1.550e-39 Identity = 86/151 (56.95%), Postives = 92/151 (60.93%), Query Frame = 1 Query: 67 GFQGAEEYSGPGEAVGPPYFNNMGCLHHKLRRHHVALHYFQKALLSLGRGATLAASASKEXXXXXXXXXXXXXXDAXXXRGRAGGVGHPSADGHVFPAPACEVLYNTGLQLLLTENPQAALRCFERAALLFHNRPRLWLRMAECSIADHLL 519 G + A +S G GCLHHKLRRHHVALHYFQKAL +LG+G AS S E GR GG DGHV PAP CEVLYNTGLQLLLT+ P+ AL CFERAALLFHNRP LWLRMAECSIA H L Sbjct: 4 GIRLASLWSTGGVRANNQTLERRGCLHHKLRRHHVALHYFQKALEALGKGGEAGASVSGEAAAA----------------GRGGGK-----DGHVSPAPTCEVLYNTGLQLLLTDKPEEALSCFERAALLFHNRPHLWLRMAECSIARHRL 133
BLAST of mRNA_H-paniculata_contig11816.1162.1 vs. uniprot
Match: K8YV70_NANGC (CCR4-NOT transcription complex subunit 10 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YV70_NANGC) HSP 1 Score: 135 bits (339), Expect = 3.030e-32 Identity = 82/185 (44.32%), Postives = 100/185 (54.05%), Query Frame = 1 Query: 1 KANLEHLRDNHRKALKLLASCHGFQGAEEYSGPGEAVGPPYFNNMGCLHHKLRRHHVALHYFQKALLSLGRGATLAASASKEXXXXXXXXXXXXXXDAXXXRGRAGGVGHP-SADGHVFPAPACEVLYNTGLQLLLTENPQAALRCFERAALLFHNRPRLWLRMAECSIADHLLRH---RKHGAV 543 KANLE+LR N+RKALKLLASCH G A+G Y N+MGCLH K+ H VAL YFQ+A+ S G+ +A+ S G P DG V P CE+ YNTGLQLL+ A RCFE A+L+F+NRPR+WLRMAEC + H R R+ G V Sbjct: 330 KANLEYLRQNYRKALKLLASCH--------RGEDSAMGAAYLNDMGCLHSKMGLHSVALQYFQRAVASSGQDRPASANGSPAGETPGMPLLPG---------------GRPLETDGRVLPHTFCEIAYNTGLQLLILGRSVQAFRCFENASLVFYNRPRVWLRMAECCV--HAYREEEGRREGPV 489
BLAST of mRNA_H-paniculata_contig11816.1162.1 vs. uniprot
Match: R1BXE6_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BXE6_EMIHU) HSP 1 Score: 97.1 bits (240), Expect = 3.900e-19 Identity = 73/190 (38.42%), Postives = 94/190 (49.47%), Query Frame = 1 Query: 4 ANLEHLRDNHRKALKLLASCHGFQGAEEYSGPGEAVGPPYFNNMGCLHHKLRRHHVALHYFQKALLSLGRGATLAASASKEXXXXXXXXXXXXXXDAXXXRGRAGGVGHPSADGHVFPAPACEVLYNTGLQLLLTENPQAALRCFERAALLFHNRPRLWLRMAECSIADHLLRHRK-HGAVAGTYPNSLG 570 AN E LR N+RKA+KLL++C+ Q +E P A Y+NNMGC+HH +RRH A YF +AL A+L A A+ G A + H S D E+ YN GLQLLL +AA CF A L H +PR WLR E IA HL R + AG+ P+++G Sbjct: 245 ANNESLRQNYRKAMKLLSNCN--QRSER--DPNFAA--LYYNNMGCIHHSMRRHTAAAFYFGRALRE---NASLCAPAAN---------------------GEAVPLTHFSCDRR------SELEYNRGLQLLLAGKGEAAFACFHAALKLLHRQPRAWLRAGEACIAAHLEREQAVRAGRAGSRPSAVG 398
BLAST of mRNA_H-paniculata_contig11816.1162.1 vs. uniprot
Match: A0A7R9YFP9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YFP9_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 5.550e-19 Identity = 66/183 (36.07%), Postives = 87/183 (47.54%), Query Frame = 1 Query: 1 KANLEHLRDNHRKALKLLASCHGFQGAEEYSGPGEAVGPP-------------YFNNMGCLHHKLRRHHVALHYFQKALLSL--GRGATLAASASKEXXXXXXXXXXXXXXDAXXXRGRAGGVGHPSADGHVFPAPACEVLYNTGLQLLLTENPQAALRCFERAALLFHNRPRLWLRMAECSI 504 KAN E+LR+N++K LKLL + E+++ P A + NNMGCLH +L R VALHYFQ+AL L +G+ S+ +E D V P+ +LYNTGLQLLL PQ A +A LF +RPRLW+R+AEC I Sbjct: 318 KANYEYLRNNYKKVLKLLDAASRGANEEQHAQPSAATAGGEQHSILTPSMRILFLNNMGCLHLRLHRARVALHYFQQALSELENAKGSRKTTSSGQE-----------------------------QMDLEVLPSE--NILYNTGLQLLLVGRPQEAFAALRASATLFTHRPRLWIRLAECCI 469
BLAST of mRNA_H-paniculata_contig11816.1162.1 vs. uniprot
Match: A0A7S0EVC9_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EVC9_9EUKA) HSP 1 Score: 94.4 bits (233), Expect = 3.300e-18 Identity = 72/211 (34.12%), Postives = 95/211 (45.02%), Query Frame = 1 Query: 1 KANLEHLRDNHRKALKLLA-SCHGFQGAEEYSGPGEAVGPPYFNNMGCLHHKLRRHHVALHYFQKALL---SLGRGATLAASASKEXXXXXXXXXXXXXXDAXXXRGRAGGVGHPSADGHVFPAPA------CEVLYNTGLQLLLTENPQAALRCFERAALLFHNRPRLWLRMAECSIADHLLRH------RKHGAVAGTYPNSLGFAAAR 585 K+NLE+LR N+RKA+KLL SC + S V YFNNMGC+HH +RRH A YF +AL +L GA A SA+ H PA CE+ YN GLQLLL+ P+ A F+ + L H +PR WLR+ E A H+ + R+ G V+ S+G +R Sbjct: 288 KSNLEYLRQNYRKAIKLLNNSC-------QRSDRDPNVSALYFNNMGCIHHLMRRHTAACFYFTRALQENDALYSGADKAPSAA-----------------------------------HKISLPAFACDRRCEIHYNKGLQLLLSSRPEQAFASFQESLHLLHRQPRAWLRVGEACAAAHIQQMQAAQAARQEGDVSALVSQSVGRGGSR 456
BLAST of mRNA_H-paniculata_contig11816.1162.1 vs. uniprot
Match: A0A813EAF4_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813EAF4_POLGL) HSP 1 Score: 91.3 bits (225), Expect = 4.290e-18 Identity = 68/199 (34.17%), Postives = 90/199 (45.23%), Query Frame = 1 Query: 1 KANLEHLRDNHRKALKLLASCH----------GFQGAEEYSGPG------------------EAVGPPYFNNMGCLHHKLRRHHVALHYFQKALLSLGRGATLAASASKEXXXXXXXXXXXXXXDAXXXRGRAGGVGHPSADGHVFPAPACEVLYNTGLQLLLTENPQAALRCFERAALLFHNRPRLWLRMAECSIADH 513 KA LE+ R N RKA+KLL+ C G GAE + PG EA P +FNNMGC+H + + ++A +YFQKALL+ G A S G+AG A + E YN GLQ+L++E P A +CFE+ +F PRLW+R+AEC I H Sbjct: 53 KAYLEYSRQNVRKAVKLLSLCRFNFAAAGRPLGSPGAEPRA-PGADEDGEDEVPTDFHPAQDEACSPIFFNNMGCIHFMMHKPNLAAYYFQKALLAKGPQKAPAGLLS----------------------GKAGLTLPGVAASRNWLDRRAETAYNAGLQMLMSERPGRAFKCFEQCTPVFRTWPRLWVRLAECCIEMH 228
BLAST of mRNA_H-paniculata_contig11816.1162.1 vs. uniprot
Match: L8HDZ7_ACACA (Tetratricopeptide repeat-containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HDZ7_ACACA) HSP 1 Score: 94.0 bits (232), Expect = 4.610e-18 Identity = 66/199 (33.17%), Postives = 95/199 (47.74%), Query Frame = 1 Query: 1 KANLEHLRDNHRKALKLL-ASCHGFQ---GAEEYSGPG------EAVGPPYFNNMGCLHHKLRRHHVALHYFQKALLSLGRGATLAASASKEXXXXXXXXXXXXXXDAXXXRGRAGGVGHPSADGHVFPAPACEVLYNTGLQLLLTENPQAALRCFERAALLFHNRPRLWLRMAECSIADHL-------LRHRKHGAVA 546 KA+LE+ R N+RK+LKLL AS F + S P +A+ YFNNMGC+H++ ++ A Y KA+ T ++ ++ + CE+ YN G+QLL+T P A RC RAA +H++PRLWLR+A+C+IA HL LRH+K A+A Sbjct: 286 KAHLEYTRRNYRKSLKLLNASQKRFSTNGDSSTTSSPSSSPPSPDALSAAYFNNMGCIHYQTAKYGAAAFYLAKAVRDDWSSTTEGSTTART-------------------------------------SRRCEMYYNQGIQLLVTGKPGVAFRCLLRAADTYHHQPRLWLRLAQCTIATHLAHERDAALRHQKSDAIA 447
BLAST of mRNA_H-paniculata_contig11816.1162.1 vs. uniprot
Match: A0A7S3DEV7_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DEV7_9EUKA) HSP 1 Score: 92.4 bits (228), Expect = 9.400e-18 Identity = 62/175 (35.43%), Postives = 92/175 (52.57%), Query Frame = 1 Query: 1 KANLEHLRDNHRKALKLLASCHGFQGAEEYSGPGEAVGPPYFNNMGCLHHKLRRHHVALHYFQKALLSLGRGATLAASASKEXXXXXXXXXXXXXXDAXXXRGRAGGVGHPSADGH---VFPAP---ACEVLYNTGLQLLLTENPQAALRCFERAALLFHNRPRLWLRMAECSIA 507 KA+LE+ + N RKA+KLL+SC Q P ++ ++NNMGC+H +L++H+ A YF +AL +L A++S+ D R +G +D + V P CE+ YN GLQLLL+ P+ A CF A+ L ++ PR+W+R AEC IA Sbjct: 247 KAHLEYSKGNFRKAMKLLSSC---QQPTSVESPLPSL---FYNNMGCIHFRLKKHNAAAFYFSRALKH--NDESLRAASSQ-------------MMDGSGKRKEKFSLGPKKSDANGVNVLPRQNNKKCEMSYNIGLQLLLSGKPELAFDCFREASNLMYSDPRVWIRTAECCIA 400 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig11816.1162.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig11816.1162.1 >prot_H-paniculata_contig11816.1162.1 ID=prot_H-paniculata_contig11816.1162.1|Name=mRNA_H-paniculata_contig11816.1162.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=264bp KANLEHLRDNHRKALKLLASCHGFQGAEEYSGPGEAVGPPYFNNMGCLHHback to top mRNA from alignment at H-paniculata_contig11816:1877..3438- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig11816.1162.1 ID=mRNA_H-paniculata_contig11816.1162.1|Name=mRNA_H-paniculata_contig11816.1162.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1562bp|location=Sequence derived from alignment at H-paniculata_contig11816:1877..3438- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig11816:1877..3438- >mRNA_H-paniculata_contig11816.1162.1 ID=mRNA_H-paniculata_contig11816.1162.1|Name=mRNA_H-paniculata_contig11816.1162.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1584bp|location=Sequence derived from alignment at H-paniculata_contig11816:1877..3438- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |