mRNA_H-paniculata_contig4654.11608.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-paniculata_contig4654.11608.1
Unique Name	mRNA_H-paniculata_contig4654.11608.1
Type	mRNA
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)

Homology

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BLAST of mRNA_H-paniculata_contig4654.11608.1 vs. uniprot
Match: D7G8P0_ECTSI (Superoxide dismutase [Fe] n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8P0_ECTSI)

HSP 1 Score: 434 bits (1115), Expect = 1.620e-145
Identity = 214/285 (75.09%), Postives = 239/285 (83.86%), Query Frame = 2

Query:   38 TMKYTASILLGGAACASAFVGTPLRASCALKSSKVSMSASSPVDTMTRGEVIKAATASALAAGVMFSGAFPAAADGPYFVPDLPYPYEALEPHIDAATMKFHHDKHHAAYVANTNKAMAGKPTPPIVELQKGAIKAGTRNAVGGHYNHCLFWNTLCAGASSGSPSPDLAKAIDAEFGSMDAMKEKFNAAAAGVFGSGWAWLGCTKDGKLAITGTPNQDNPLMDGAAGTPMVPILGLDVWEHAYYLKYQNRRPEYIGAFWNVVNWAVVSENYEMYASKGRPVPVMG 892
            TMK+T S++L GAACASAFVGTP+    +LKSS V MS S  + +++RG+ +KAA ASA AAG +FS +FPA ADGPY +PDLPY Y+ALEP+IDAATMKFHHDKHHAAYV N NKA+AGK  P +++LQK AIK G RNA GGHYNHCLFWNTLC   SSG+PS  LAKAID  FGSMD MK +F   AAGVFGSGWAWLGCT DGKLAITGTPNQDNPLM+GAAGT MVPILGLDVWEHAYYLKYQNRRPEYI AFWNVVNWAVVSENYEMYAS+G+ VPV G
Sbjct:   16 TMKFTTSLVLSGAACASAFVGTPVSTRASLKSSAVRMSVSDSMGSLSRGDALKAAAASAAAAGFVFSNSFPAFADGPYNLPDLPYSYDALEPYIDAATMKFHHDKHHAAYVGNANKALAGKTAPSLLDLQKDAIKTGVRNAGGGHYNHCLFWNTLCNHESSGAPSGTLAKAIDEAFGSMDEMKAQFGTTAAGVFGSGWAWLGCTPDGKLAITGTPNQDNPLMEGAAGTAMVPILGLDVWEHAYYLKYQNRRPEYISAFWNVVNWAVVSENYEMYASQGKGVPVQG 300

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BLAST of mRNA_H-paniculata_contig4654.11608.1 vs. uniprot
Match: A0A835ZFH9_9STRA (Superoxide dismutase [Fe] n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFH9_9STRA)

HSP 1 Score: 345 bits (885), Expect = 2.600e-111
Identity = 186/283 (65.72%), Postives = 204/283 (72.08%), Query Frame = 2

Query:   50 TASILLGGAACASAFVGTPLRASCALKSSKVSMSASSPVDTMTRGEVIKAATASALAAGVMF-SGAFPAAA-DGPYFVPDLPYPYEALEPHIDAATMKFHHDKHHAAYVANTNKAMAGKPTPPIVELQKGAIKAGTRNAVGGHYNHCLFWNTLCAGASSGSPSPDLAKAIDAEFGSMDAMKEKFNAAAAGVFGSGWAWLGCTKDGKLAITGTPNQDNPLMDGAAGTPMVPILGLDVWEHAYYLKYQNRRPEYIGAFWNVVNWAVVSENYEMYASKGRPVPVMG 892
            T +++L  A   SAFV            SK+ M+A   V    R + I+   A+  A G+ F + + PA A DGPY +PDLPY YEALEPHIDAATMKFHHDKHH AY+ N NKA+AGK    I++LQKGAIKAG RNA GGHYNH LFW TL   A SG PS  L  AIDA FGS DAMKEKF AAAAGVFGSGWAWLG TKDGKL IT TPNQDNPLM+GAA T M+PILGLDVWEHAYYLKYQNRRPEYI AFWNVVNWA VSE YE YA K   VPV G
Sbjct:    5 TVAVVLACAGFGSAFVAP---------GSKMVMTAEGGVS---RRQAIQTGAATVTATGLAFLTNSVPARAEDGPYVLPDLPYAYEALEPHIDAATMKFHHDKHHLAYITNANKAVAGKEAVSILDLQKGAIKAGVRNAGGGHYNHSLFWTTLAPAADSGKPSAALTMAIDASFGSFDAMKEKFGAAAAGVFGSGWAWLGVTKDGKLDITTTPNQDNPLMEGAACTAMIPILGLDVWEHAYYLKYQNRRPEYIAAFWNVVNWAKVSEYYEQYALKQEGVPVQG 275

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BLAST of mRNA_H-paniculata_contig4654.11608.1 vs. uniprot
Match: A0A7S3XQ28_HETAK (Superoxide dismutase [Fe] n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQ28_HETAK)

HSP 1 Score: 307 bits (787), Expect = 1.040e-96
Identity = 167/264 (63.26%), Postives = 187/264 (70.83%), Query Frame = 2

Query:  119 CALKSSKVSMSASSPVDTMTRGEVIKAATASAL--AAGVMFSGAFPAAADGPYFVPDLPYPYEALEPHIDAATMKFHHDKHHAAYVANTNKAMAGKP-TPPIVELQKGAIKAG--TRNAVGGHYNHCLFWNTLCAGASSGSPSPDLAKAIDAEFGSMDAMKEKFNAAAAGVFGSGWAWLGCTKDGKLAITGTPNQDNPLMDGAA-GTPMVPILGLDVWEHAYYLKYQNRRPEYIGAFWNVVNWAVVSENYEMYASKGRPVPVMG 892
            CAL       + S  +   +R + IKA  A+AL  AA  +  G  PA ADGPY +PDLPY Y+ALEP ID+ATMKFHHDKHHA YVAN NKA+AGK     I++LQ GA+KAG   RN+ GGHYNHC FWN +     SGSPS  LA AID  FGSMDAMKEKFNAAA G FGSGWAWLG   DGKL I GTPNQDNPLM G      M PILGLDVWEHAYYL+Y+NRR EY+  FW +VNWA VS+NYE YASKG  VPV G
Sbjct:    9 CALACVSAFQTQSMSMTESSRRDFIKATGAAALGSAAFSLAGGNSPAYADGPYTLPDLPYAYDALEPIIDSATMKFHHDKHHATYVANVNKALAGKDGVGSILDLQAGALKAGGAVRNSGGGHYNHCFFWNCMGPEKESGSPSAALATAIDEAFGSMDAMKEKFNAAATGQFGSGWAWLGVKADGKLGICGTPNQDNPLMKGIGKDLAMKPILGLDVWEHAYYLQYKNRRLEYVTNFWKIVNWAQVSDNYESYASKGMGVPVEG 272

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BLAST of mRNA_H-paniculata_contig4654.11608.1 vs. uniprot
Match: A0A7S0L727_9EUKA (Superoxide dismutase n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L727_9EUKA)

HSP 1 Score: 293 bits (749), Expect = 1.050e-90
Identity = 149/242 (61.57%), Postives = 174/242 (71.90%), Query Frame = 2

Query:  170 TMTRGEVIKAATASALAAGVMFSGAFPAAADGPYFVPDLPYPYEALEPHIDAATMKFHHDKHHAAYVANTNKAMAGKPTPPIVELQKGAIKAGTRNAVGGHYNHCLFWNTL---CAGASSGSPSPDLAKAIDAEFGSMDAMKEKFNAAAAGVFGSGWAWLGCTKDGKLAITGTPNQDNPLMDGAAGTPMVPILGLDVWEHAYYLKYQNRRPEYIGAFWNVVNWAVVSENYEMYASKGRPVPV 886
            T+TR   +    A+A+AA ++ + +   A D  + +P LPY Y+ALEPH+DAATMKFHHD HH AY+ N NKAMAGKP+  +V L  GA  A   NA GGHYNHCLFW T+   C GA +G+    LA  IDA FGS D  K KF+AAAAGVFGSGWAWL   KDG + I  TPNQDNPLMDGA    +VPILG+DVWEHAYYLKYQNRRPEYI AF+NVVNWA V E Y+ YASKG PVP+
Sbjct:   59 TITRRNALNLGVAAAVAAPLLGAQSPALAEDAMFSLPPLPYAYDALEPHVDAATMKFHHDFHHQAYINNLNKAMAGKPSASLVSLMPGAKAAKLNNAGGGHYNHCLFWTTMGPKCGGAPTGT----LATKIDAAFGSYDEFKAKFSAAAAGVFGSGWAWLAVAKDGSVQIVTTPNQDNPLMDGATEPGLVPILGIDVWEHAYYLKYQNRRPEYITAFYNVVNWAKVGEYYDEYASKGEPVPL 296

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BLAST of mRNA_H-paniculata_contig4654.11608.1 vs. uniprot
Match: A0A8J5XSB1_DIALT (Superoxide dismutase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XSB1_DIALT)

HSP 1 Score: 283 bits (724), Expect = 2.060e-87
Identity = 140/207 (67.63%), Postives = 156/207 (75.36%), Query Frame = 2

Query:  269 YFVPDLPYPYEALEPHIDAATMKFHHDKHHAAYVANTNKAMAGKPTPPIVELQKGAIKAG--TRNAVGGHYNHCLFWNTLCAGASSGSPSPDLAKAIDAEFGSMDAMKEKFNAAAAGVFGSGWAWLGCTKDGKLAITGTPNQDNPLMDGAAGTPMVPILGLDVWEHAYYLKYQNRRPEYIGAFWNVVNWAVVSENYEMYASKGRPVP 883
            Y +PDLPY YEALEP+IDAATM+FHHDKHHA YVAN NKA+ GKP   I+ELQK AI AG   RN+ GGHYNH LFW  +      G P+  LA  ID  FGS D  KE+F+A +AG FGSGW WLG   DGKLAI  TPNQDNPLMDG   T MVPILGLDVWEHAYYLKYQNRRPEYI +++NVVNW  V+ NYE YASKG+ VP
Sbjct:   61 YTLPDLPYDYEALEPYIDAATMRFHHDKHHATYVANVNKALEGKPAKSILELQKDAISAGGAVRNSGGGHYNHALFWEEMGPATGKG-PTGALAAKIDEAFGSFDKFKEEFSAKSAGRFGSGWCWLGVKPDGKLAIDTTPNQDNPLMDGGCETKMVPILGLDVWEHAYYLKYQNRRPEYISSWFNVVNWEKVAFNYEKYASKGQGVP 266

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BLAST of mRNA_H-paniculata_contig4654.11608.1 vs. uniprot
Match: L1K0Q9_GUITC (Superoxide dismutase n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1K0Q9_GUITC)

HSP 1 Score: 282 bits (722), Expect = 5.880e-87
Identity = 137/213 (64.32%), Postives = 162/213 (76.06%), Query Frame = 2

Query:  257 ADGPYFVPDLPYPYEALEPHIDAATMKFHHDKHHAAYVANTNKAMAGKPTPPIVELQKGAIKAGT--RNAVGGHYNHCLFWNTLCAGASSGSPSPDLAKAIDAEFGSMDAMKEKFNAAAAGVFGSGWAWLGCTKDGKLAITGTPNQDNPLMDGAAGTPMVPILGLDVWEHAYYLKYQNRRPEYIGAFWNVVNWAVVSENYEMYASKGRPVPVM 889
            A+G + +P LPY Y++LEP+ID  TMK HHDKH  AY+ N NKA+ GKP   + ++QK AIKAG   RN  GG+YNH LF+  +   A+SG PS  L KAIDA FGSMD MKE+FNAAAA  FGSGWAWLG T +GKLAIT TPNQDNPLM+G  G  M+P+LGLDVWEHAYYLKYQNRRPEYI  +W+VVNW  VS NYE +A+KG PV V+
Sbjct:   66 AEGAFSLPALPYDYKSLEPYIDEETMKLHHDKHFNAYLTNLNKALEGKPAAKLTDIQKEAIKAGPAIRNNGGGYYNHALFFKEMGPAANSGKPSAALQKAIDASFGSMDKMKEEFNAAAAKRFGSGWAWLGVTPEGKLAITSTPNQDNPLMEGCEGQKMIPVLGLDVWEHAYYLKYQNRRPEYITNWWSVVNWEAVSNNYEKFAAKGIPVEVV 278

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BLAST of mRNA_H-paniculata_contig4654.11608.1 vs. uniprot
Match: A0A7S1DDM0_HEMAN (Superoxide dismutase n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DDM0_HEMAN)

HSP 1 Score: 278 bits (711), Expect = 3.980e-85
Identity = 137/211 (64.93%), Postives = 154/211 (72.99%), Query Frame = 2

Query:  263 GPYFVPDLPYPYEALEPHIDAATMKFHHDKHHAAYVANTNKAMAGKPTPPIVELQKGAIKA-GTRNAVGGHYNHCLFWNTLCAGASSGSPSPDLAKAIDAEFGSMDAMKEKFNAAAAGVFGSGWAWLGCTKDGKLAITGTPNQDNPLMDGAAGTPMVPILGLDVWEHAYYLKYQNRRPEYIGAFWNVVNWAVVSENYEMYASKGRPVPVMG 892
            GPY +P LPY Y ALEP ID  TMK HHDKHH AYV N NKA+ GK  P I  LQK A+K+   RN  GGHYNH LFW+TL   ASSG PS  L KAID  FGS D M E F+  AA  FGSGWAWLG + +GKL I  TPNQDNPLM+GA    M+P+LGLDVWEHAYYLKYQN+RPEYI AF++V+NW VVS+NY  +A KG PVPV G
Sbjct:   82 GPYKLPPLPYDYAALEPAIDEMTMKIHHDKHHQAYVNNVNKALEGKDAPSITALQKDAMKSPALRNNGGGHYNHALFWSTLSPVASSGKPSAALQKAIDEAFGSTDKMVEAFSGCAAKRFGSGWAWLGVSPEGKLVIDSTPNQDNPLMEGAGCAKMIPVLGLDVWEHAYYLKYQNKRPEYIKAFFSVINWGVVSKNYADFAVKGLPVPVQG 292

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BLAST of mRNA_H-paniculata_contig4654.11608.1 vs. uniprot
Match: A0A7S3RIY5_EMIHU (Superoxide dismutase n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3RIY5_EMIHU)

HSP 1 Score: 270 bits (690), Expect = 1.520e-82
Identity = 136/210 (64.76%), Postives = 153/210 (72.86%), Query Frame = 2

Query:  254 AADGPYF-VPDLPYPYEALEPHIDAATMKFHHDKHHAAYVANTNKAMAGKPTPPIVELQKGAIKAGTRNAVGGHYNHCLFWNTLCAGASSGSPSPDLAKAIDAEFGSMDAMKEKFNAAAAGVFGSGWAWLGCTKDGKLAITGTPNQDNPLMDGAAGTPMVPILGLDVWEHAYYLKYQNRRPEYIGAFWNVVNWAVVSENYEMYASKGRPV 880
            AAD P F +P LPY Y+ALEPHIDAATMKFHHD HH AY+ N NKAMAGKP   +V L  GA  A   NA GGHYNHC+FW+TL   A  G PS  L  A+   FGS D  K +F+AAAAGVFGSGWAWL   KDG + I  TPNQDNPLMDGA    ++PILG+DVWEHAYYLKYQNRRPEYI AF+NVVNWA V E Y   A+ G+P+
Sbjct:   46 AADDPMFTLPPLPYAYDALEPHIDAATMKFHHDFHHQAYITNLNKAMAGKPKADLVSLMPGAKAAKLNNAGGGHYNHCMFWSTLGPKAG-GEPSGALGDAMAKAFGSYDDFKAQFSAAAAGVFGSGWAWLAVAKDGSVKIVTTPNQDNPLMDGATEAGLIPILGIDVWEHAYYLKYQNRRPEYIAAFYNVVNWAKVGEYYAT-AAAGKPI 253

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BLAST of mRNA_H-paniculata_contig4654.11608.1 vs. uniprot
Match: A0A7S3APP8_9EUKA (Superoxide dismutase n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3APP8_9EUKA)

HSP 1 Score: 266 bits (681), Expect = 4.520e-81
Identity = 138/240 (57.50%), Postives = 162/240 (67.50%), Query Frame = 2

Query:  161 PVDTMTRGEVIKAATASALAAGVMFSGAFPAAADGPYFVPDLPYPYEALEPHIDAATMKFHHDKHHAAYVANTNKAMAGKPTPPIVELQKGAIKAGTRNAVGGHYNHCLFWNTLCAGASSGSPSPDLAKAIDAEFGSMDAMKEKFNAAAAGVFGSGWAWLGCTKDGKLAITGTPNQDNPLMDGAAGTPMVPILGLDVWEHAYYLKYQNRRPEYIGAFWNVVNWAVVSENYEMYASKGRPV 880
            P D  T          +A +A   F GA   A DG + +P LPY Y ALEPHIDAATMKFHHD HH AY+ N NKAMAGK    +V L  GA  A   NA GGHYNHC+FW T+      G+P+  LA+ +DA FGS D  K +F+AAAAGVFGSGWAWL  T DG + I  TPNQDNPLM+GA    ++PI+G+DVWEHAYYLKYQNRRPEYI AF+NVV+W  V E YE  AS G+P+
Sbjct:   27 PADVFTPSRRDVLGLVAAASAANAFQGAA-VAQDGMFTLPPLPYDYAALEPHIDAATMKFHHDFHHQAYINNLNKAMAGKDAVSLVSLMPGAKAAKLNNAGGGHYNHCMFW-TIMGKGGGGTPTGVLAEKMDAAFGSYDEFKSQFSAAAAGVFGSGWAWLAVTSDGSVKIVTTPNQDNPLMEGATEAGLIPIMGIDVWEHAYYLKYQNRRPEYIAAFYNVVDWTKVGEYYETAAS-GKPI 263

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BLAST of mRNA_H-paniculata_contig4654.11608.1 vs. uniprot
Match: A0A7S3WV96_9SPIT (Superoxide dismutase n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3WV96_9SPIT)

HSP 1 Score: 264 bits (675), Expect = 1.170e-80
Identity = 140/223 (62.78%), Postives = 156/223 (69.96%), Query Frame = 2

Query:  215 LAAGVMFSGAFPAAADGPYF-VPDLPYPYEALEPHIDAATMKFHHDKHHAAYVANTNKAMAGKPTPPIVELQKGAIKAGTRNAVGGHYNHCLFWNTLCAGASSGSPSPDLAKAIDAEFGSMDAMKEKFNAAAAGVFGSGWAWLGCTKDGKLAITGTPNQDNPLMDGAAGTPMVPILGLDVWEHAYYLKYQNRRPEYIGAFWNVVNWAVVSENYEMYASKGRPV 880
            LAA      A PA AD P F +P LPY Y+ALEPHIDAATMKFHHD HH AY+ N NKAMAGKP   +V L   A K    NA GGHYNHCLFW T+   A  G+PS  LA+ I+  FGS D  K +F+ AAAGVFGSGWAWL  TKDG + IT TPNQDNPLMD       +PILGLDVWEHAYYLKYQNRRPEYI AF+NV+NW  V E Y   AS G+P+
Sbjct:   13 LAALAAVGSASPALADDPMFTLPPLPYAYDALEPHIDAATMKFHHDFHHQAYITNLNKAMAGKPAASLVSLMPDAKKNKLNNAGGGHYNHCLFWTTMGPKAG-GTPSGVLAEKINDAFGSFDDFKSQFSTAAAGVFGSGWAWLVVTKDGSVKITSTPNQDNPLMDSNGE---IPILGLDVWEHAYYLKYQNRRPEYISAFFNVINWDKVGEYYAQAAS-GKPI 230

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig4654.11608.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig4654.11608.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G8P0_ECTSI	1.620e-145	75.09	Superoxide dismutase [Fe] n=1 Tax=Ectocarpus silic...	[more]
A0A835ZFH9_9STRA	2.600e-111	65.72	Superoxide dismutase [Fe] n=1 Tax=Tribonema minus ...	[more]
A0A7S3XQ28_HETAK	1.040e-96	63.26	Superoxide dismutase [Fe] n=2 Tax=Heterosigma akas...	[more]
A0A7S0L727_9EUKA	1.050e-90	61.57	Superoxide dismutase n=1 Tax=Coccolithus braarudii...	[more]
A0A8J5XSB1_DIALT	2.060e-87	67.63	Superoxide dismutase n=1 Tax=Diacronema lutheri Ta...	[more]
L1K0Q9_GUITC	5.880e-87	64.32	Superoxide dismutase n=1 Tax=Guillardia theta (str...	[more]
A0A7S1DDM0_HEMAN	3.980e-85	64.93	Superoxide dismutase n=2 Tax=Hemiselmis andersenii...	[more]
A0A7S3RIY5_EMIHU	1.520e-82	64.76	Superoxide dismutase n=2 Tax=Emiliania huxleyi Tax...	[more]
A0A7S3APP8_9EUKA	4.520e-81	57.50	Superoxide dismutase n=1 Tax=Haptolina ericina Tax...	[more]
A0A7S3WV96_9SPIT	1.170e-80	62.78	Superoxide dismutase n=1 Tax=Strombidinopsis acumi...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig4654	contig	H-paniculata_contig4654:409..8298 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	437.2
Seed ortholog evalue	5.9e-120
Seed eggNOG ortholog	2880.D7G8P0
KEGG ko	ko:K04564
KEGG Pathway	ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016
Hectar predicted targeting category	chloroplast
EggNOG free text desc.	oxidoreductase activity, acting on superoxide radicals as acceptor
EggNOG OGs	COG0605@1,KOG0876@2759
Ec32 ortholog description	manganese superoxide dismutase
Ec32 ortholog	Ec-22_002450.1
EC	1.15.1.1
COG Functional cat.	P
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko00001,ko01000
Exons	9
Model size	1991
Cds size	855
Stop	1
Start	1

Relationships

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622930388.3604062-UTR-H-paniculata_contig4654:408..1504	1622930388.3604062-UTR-H-paniculata_contig4654:408..1504	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig4654 409..1504 -
1691481269.0748842-UTR-H-paniculata_contig4654:408..1504	1691481269.0748842-UTR-H-paniculata_contig4654:408..1504	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig4654 409..1504 -
1622930388.535-UTR-H-paniculata_contig4654:8258..8298	1622930388.535-UTR-H-paniculata_contig4654:8258..8298	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig4654 8259..8298 -
1691481269.2077007-UTR-H-paniculata_contig4654:8258..8298	1691481269.2077007-UTR-H-paniculata_contig4654:8258..8298	Halopteris paniculata Hal_grac_a_UBK monoicous	UTR	H-paniculata_contig4654 8259..8298 -

The following CDS feature(s) are a part of this mRNA:

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig4654.11608.1	prot_H-paniculata_contig4654.11608.1	Halopteris paniculata Hal_grac_a_UBK monoicous	polypeptide	H-paniculata_contig4654 1505..8258 -

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-paniculata_contig4654:409..8298-
coding sequence from alignment at H-paniculata_contig4654:409..8298-

protein sequence of mRNA_H-paniculata_contig4654.11608.1

>prot_H-paniculata_contig4654.11608.1 ID=prot_H-paniculata_contig4654.11608.1|Name=mRNA_H-paniculata_contig4654.11608.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=285bp
MKYTASILLGGAACASAFVGTPLRASCALKSSKVSMSASSPVDTMTRGEV
IKAATASALAAGVMFSGAFPAAADGPYFVPDLPYPYEALEPHIDAATMKF
HHDKHHAAYVANTNKAMAGKPTPPIVELQKGAIKAGTRNAVGGHYNHCLF
WNTLCAGASSGSPSPDLAKAIDAEFGSMDAMKEKFNAAAAGVFGSGWAWL
GCTKDGKLAITGTPNQDNPLMDGAAGTPMVPILGLDVWEHAYYLKYQNRR
PEYIGAFWNVVNWAVVSENYEMYASKGRPVPVMG*

mRNA from alignment at H-paniculata_contig4654:409..8298-

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-paniculata_contig4654.11608.1 ID=mRNA_H-paniculata_contig4654.11608.1|Name=mRNA_H-paniculata_contig4654.11608.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7890bp|location=Sequence derived from alignment at H-paniculata_contig4654:409..8298- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AAGACAGGTCCGCCACACATCAACTGACACAGCTAGAACGATGAAGTACA
CTGCATCTATTCTACTGGGCGGCGCAGGTATGAATTGCGTAATGTGTTGC
ACATGTTGCTCTTGCGCAGGAGCTACTGCTGCTGTTGTTCCAGCAGTAAT
ACCTTTGAACCTTCTCTGATGGCTCCGTTCCTTTTAGATAGCTCTAAATT
ATGAAGATTATGAGCTGGAATGTTGCCCTCTAGATAGTGCATGCGTGCAT
GCTGTGGTACCTTGCAAACCGGATGCTCAGGGCCAAATAAATGCGCCAGG
CTGTATCAGAGGTAAAAGAATTTGTTCGGAGGCTTGGTGGCAACTAGCGT
CCATGCTCGTGTTGCACGTCCCTAGGAACTGTGGGCGAACTTTTGTTGCA
ATTTTTCGGCATGCAGACCAACTTGTGCGCCCCATATTTACCTGTCTCCT
AGTTATGTTTCGGTTGTCTGGCGTCGTGTGCGTGTTTTGGGCCGGTTATA
TTGCCCGCTCTGATGGAGATATGCACATGATAGAGGTTCACTTGCTGGGG
TTGTGCCGAGGCTGCTCGGATACACAACGGCTGTTGTGTTGTTGCTCCCA
GATCCGATTGTATATTGCCGCGTTTCTGTCACGGTGGTTGGATGCTGTTA
ATTGAACTCGAAATCTTCGGTTTTTATTTTGAGCAGAATGAACGAGTGAG
AGACAGACCTACTCATTTTACAGGTAACTTCCATATGTGAACTTGTTTCC
CAAATAAGGAAGCGGGCTCGTGTGATTGGCATTCAGAAAGATACCTACAT
CGCGAAAAATCATGAGGCCTTTCCGCATGCTGACATGGATACGGATGCAT
GAGGAATGATTTACACCTGACGTAATCGTCGAATTTTTTTCGCACTGTAC
TCGACACGGAGGGAGAACGGATGGAATTTTGTCAGAGAGGATTGGTGATC
AAGTACTGACGACGTGTGCCAGACGTACTGGACACCTAGCTTTGAAGATT
GTACAAATAATGTGTATTCAGCTATATAGAGACAAGGGCACAGTAAGCGA
ATGAAGCTACTTGGCGAATTCTGATTAAACACCGGAGCCACACGATTATG
GTTAGACTAATGCCATTATAAGGTTGTCAAGGAAAAATCTTGGTTAGAGT
TCGAGAATAATCCCAGTCCCCTTATTTCCGGCAAGATTTCCTCCTAATTG
TCTCCAAAATTATCAGCCAACCTAAGATTCGCTGTCAACTACAAAAATCA
AAAGGTGCAAAAGTAGCCATTTGTACAGGTATATGCTCGCATCTCCTGTT
GACATCCACGATTGAGTTTCAGTTCACCAACCAGAAGACAGTCGGTTGTC
GTCCGCAAGGCAGCAAACACCCATGTCTTGCAGCCATTCTTTGAAGGCTC
AAGGGGCATCCTCTCACGGATGGCTCTGTACTACGAAATGGAGGATGGTA
CAGTAGAGTTCATGTTTTGGTCCCTTCAAATAATAAGCATGTCGTGGTGT
AGGACGAGTGACCGATCATGCCAACCGCTCACCGAGCTCTCAGTGCAATG
AGCAAATGTTCTGTGTCACTTGATCGTTTCCAAAAAATACCAGTGGTCAG
TATGGAAACTAGTGAGAGACGATCATGACGCATGGCCTCTTTGTACCTTG
TCCTGTCATCGTACCTCGCTGTACCTTATCGTGCAGTGGCCAGTACTGCA
GTATAGTCACTGGTATCTCCTCGTTGACGTCGTCTCCATGTAGTCGAAAC
CTACAACTTGGGCACAAGCGCCTTGTTGAAATTGTATAAATGAATTGAAC
GCCACATATGAAGATTTGGTTTCAAATTTTCAAAGTCAGTTGCAAGGACT
GTTAATGTATCATGTTGAAATTTTGTTTTGGAATGACCGTTACCTTGGTC
TCTACTTTACTCTAATCGACATGTAGTAGGTACATGTGTAGACCTTGTAA
AACGCGGTGTAGTGACAAAATTGTCCCGGCCAAGGAGTTAAATTTTGTCC
CAGTCTTAGTTTGAATGACCAGGGCGTGCCTTCGAACTGCGTGACGACTC
GTCACTCCCGGTTGCCTACTCTCTGGCTCAACCAATGAGTATCCGCAGTG
ACATGATTTGAAGCAAACACAGCTGCTTCAGCCTCACAGGCATCTGTCCT
CATGGTCTTTCGCCCTACAACACGCCAACAAACGGCACACACAATACAAC
GCCAGACTTTACTATAAGTATTTTGTGTTGTCCAAACTGGTTTTGCAGAA
TACGGAATGCGCTTGTCGAGCAAATCTCACGTTGCACTTTAATGTTGCCG
CTGCTCGGTTTTGCACCCTGATCGATCATATCGTTTTCCACCAGCCTGCG
CGTCGGCGTTCGTCGGCACCCCACTCCGTGCCTCATGCGCTCTCAAGTCT
TCCAAGGTCTCCATGAGCGCGTCGAGCCCGGTTGACACAATGACACGGGG
CGAGGTCATCAAGGTGCGTATTTTGTGTCATGTTGGATCGCGTCTAGTTG
TTATTTTGTTGTGTTCTCTGTTGTGGATCACCGAGCCTTGCTTTGCCGTG
AATGCCGTGGATGTCAAAGCTCATCTTTATTCCATGTTTTATCAAGGGGA
ATTTCCTTTTGATACCTGCCCTTGCCCCCATTGTAATGCCTTATGTTTTT
TCCTCTGTAGGCTGCCACGGCATCTGCCCTGGCCGCTGGAGTAATGTTCT
CGGGCGCGTTCCCCGCCGCCGCGGATGGGCCATACTTTGTCCCTGACCTT
CCGTACCCTTACGAGGCCCTCGAACCGCACATCGATGCGGCCACTATGAA
GGTCTGTTTCATACCTTTATTGTCTACGGCAGTTGCAAAGTGGACTCTGG
ATGCAAGTCTACCAGGGTATGGTTTGTTTCGCAATTATTTACACCTAGTG
TCACTGAGCGGTGGACAAAGGGTGCCCTACCGTCATCGGCAACTTAACCC
TAAAATTCGATGAATGTTTGAACAAAGCTAAAGGCGAAACGTGCAAGGTT
GTTGAAGCCTGCGAGCCAGCTAACTTACGAAATTCGAAAATCTAATGTAA
GATTTCAAGTCAAGCTTATGAATGATGTCATTTGATTTGGGAATGATATA
GCTGGATCTTTACCGCTCCTTCATCCGCGGTGCCCCAAGTGTTCTTGGTT
GATTTCATATTTGCCTCGTTGACAACGATTTTAATGGAGTCAGATATTCC
AAACGCTCACTCAGTGGAGCAAACACTTGAGGGGATGGAGAACAGAATGC
CGATTAATTAATTCGTGATAGTACTGCAAAGCACATGGCGATACTAGGAG
GATCAGCAGGTTTAGTGTACTTCCAATGGGCGCAATGTTGTCCTGATAAC
GTTTGGCGAAATACTGATCTATTGCACAACTTTATACTTCCTTTTATAGT
TTATTCTGCAAAATGAAGTTTTGCAATGAAGCAAGCTTGCATAAACTGAT
CTCTTGTCCCCTCTCTCCCCCGCTGTTTTGCCATTTGCGGATGATAAAAC
TACACGCGACAACAAACAGTTCCACCATGACAAGCACCACGCCGCGTACG
TGGCCAACACCAACAAGGTGCGTGGAACATGGCCAAAAGTCTACTATGTG
GTGGTGATTTTCGGAAAAGCTCTTGTGTTCATTGCTCCTTATCTTTCTAT
TGTGCTTCTTTTGTGTTTCAAAACGTAGTTCCTGGTAACCTGCTATTAAC
CCACCAGTATCGCGGTTTGTACTGTCTGCACTAGAAGACCAGCTGTATGA
AAAATGGCTGGGGCCTTCATCTGGTAGCCATGCCATGGGCATCATCTCCC
CACTTTCTGGAGGCGGAGCCCAGATACGCATTAGGTCATTACTGGGGCCA
AACGGGGTCATGATCGGAACGCATGTTCACGCAAATTGTTGCAGTGGTGA
TTGCAGCCCGACTCAATATTCAATTGGTGGCTGATATACACGAAGTTCTT
TTCAATAAGGCCTCGTCTAAAGGCATTTTCCCTAAGGAGTCTGAACTTAC
AGCTCCTTTTCGTTGAAGGCCCGAGAGCGTGCACAATACTTCAGTGCCGT
CAGAGGTCTTTTAGTGGGTGAAACTCCTACACTGCCTACTTGGTTCAGCC
GAACCGGGGTGGCACGTACCCCGCAGAGGAATAAATAACTCTGTTTCTGT
TAAAGGAAATGTAGACATGTTTGAGCGAATACCTGAATGTTGAAGTGGAA
AAGCCATTTGCCTCAGCCTTCCGGGGGTTAAAAAATAAACAAACCTCAGT
GCCGTACAATATACGAACAAGATGTAGTGACATATTCTATCGTAACGGGT
CGGTCCGAAGGTTGACAAAACCCATAGGACCTCGATTCTCACCCATTGAG
AAGGGTTATAATCATTGGGTTCCTATTTTTATCTGTGTTTCACACTGCCG
TGTACTATACCGTCCTCGAGGACTCAATTCTGTGTTCCATCTGCAAGTAT
AGTTGAAAAACTTTCCTTGGACAATTTTCGTGGGTCTTCATATTTTGTGT
ACTTCAGGCAATGGCCGGCAAGCCGACGCCACCTATCGTGGAGCTTCAGA
AGGGCGCTATCAAGGCCGGAACGCGCAACGCTGTTGGAGGTGAAAGGGGG
TTTGGGGGAGAGCCTCATCATTACGACTGTATATTTTCCCGTGTGGTTGA
TGGATGGGGTATGGATGTTCTTTGTTGTCGGGTATGCTTGATTCGACGCT
ACTGCTGTCTTCAGGTAGAGATTAGGGTCCGAGGCTTCTGGGTTGATGCG
TACGATCTCTGAGTCCCTCCAAATGAAAAACTGACGCAGTCGAGAGAAAC
ACCCATCTCTTTGCTTTGTTGACTGACGCCCGATATATACTGTTTGAGTG
TTTTTTTAATTGCTTGCGCCCTTGTCATCGCTATTATTGTGCATTTTTTT
CTAGGCCACTACAACCACTGCCTGTTCTGGAACACCTTGTGCGCCGGCGC
CAGCAGCGGGTCGCCATCTCCCGATGTGAGTTAAATGGAAATTTGTGTCG
TCTTTCTTTGTTTCCGAGTTTCAAGCAGCATGATTCCTTCGTCAGGTTTT
GTACGTACTGTGATGATCTTCTCGTCTTTGCGATTGACGTGATTTGTTGT
ATTTCCTCTGCATTGAATCCATCCACTCATTGATGAGGAGCACCACCTTC
ATGTTTATTCTTTTTTATTTTTCACCAGCTGGCGAAGGCGATCGACGCGG
AATTTGGGTCGATGGATGCGATGAAGGAGAAGTTCAACGCTGCTGCGGCG
GGCGTGTTCGGGTCCGGATGGGCTTGGTTGGGGTGCACCAAGGACGGAAA
GCTAGCAATCACCGGCACCCCCAACCAGGGTAATCTAAACTTGACTAACG
TAGTCACGTTTTGGTTAGTTTTTCGGAATGCTGTACTAAGTGTTGTAGTA
CACAATTCCCCCCGTGTTTTATCTAATGCTGCTATTTCTTGTTGAACGTC
ACCGCGCAGAGCTGTGTTGAGACACTTGTTATGTTGATGTTGCTTGCGCA
TTTGACTATTTTTGTTATTGATCGATTGTTGGGAACGCAGCTGTAATCCT
CCAAGTTCTCTCCCAACCAACCTACACGCCTTCCCACGGTGAATCGTTGT
TACGATTAATCTCTAAAAAAAGTACCCGCTGACATGGTGAGACCAAGTCG
AACAGAAACCAAAGTCGGTCTTGGGCATAGTGATTTGAGGGTGAACAGTC
CGTCACTCAACGGGTAACCACAGGCTTATCTCTTCTTACAAGTTCAAGTT
CACCTTCATGATGTTTGGCACCTTGATGTTGATTTATCATGTCCTGGTAC
AGTAGAACGTACACTCCAAAGGTTGGGGTGTCCCCCCCTCAAATACCCCA
AACAGAAAAACAAACCCATTTGCGAGTCCTGACTGTAGCCGTTGCCCTTG
TCCCTCATACTACTCCCTCAAAACCTGCTGACGGTTGCAATGCGCGAAGA
CAACCCGTTAATGGACGGTGCGGCGGGTACGCCCATGGTACCCATCCTCG
GGCTTGACGTCTGGGAACACGCCTACTACCTAAAGTACCAAAACCGCCGG
CCGGAGTACATCGGCGCCTTCTGGAATGTTGTCAACTGGGCTGTGGTAAG
TACAGTAACATACGGCTAAAGAAGAGAACAAGGGAGTTATACTGTAGCCA
CTTATTGTGAAACCTGCCGGTTGCCAGAAGAGCGGTCAGTTATGTGACCT
TTACCGTAAGAGCGGATACACAACAATAAAATACCCGAAAAAGCAAAATT
TTGACAAAACCCCCCAAAGGAATCTAACAAAGAGGCAAAAACACACGTAC
AGTGAAGACACTCGGTAAAACGGGTGCGACACGTGATAAGTTGAAATGAC
CTCAGGGCTGGGCAATACTCCAAGTGCAGTCAGCGGGCATTGCTGTTGGT
TCGAACAAGACCTTTCGTCGAAGTGTTCTTTTACATGTTATTTTAAAATG
TGTAAAAGGTTGAGGTGACATGCTAAAAGTCCTGTTTGTTCAAGTGAAAA
TTCCCTTACGATAATCACCGCAATGAACGTCTGATGGAATCAAAATAGCA
AGTTCGCCTGGAAGTATTCGTCCAACTAATTTCACAGGTTTCAGGTTTCG
AGATCAATTGAAGTCCACGCATACCTTGGATGTAGTCTGCGTTTTACGGA
TTTGATGATTGGCAGCTGGCATCAGCAACTACACTCAATTTGCTTTTTGT
TCATGCTCTTCCCGCCTCATTTTTTTCATATTAGGTGTCGGAGAACTACG
AGATGTACGCCTCGAAGGGACGCCCGGTGCCCGTCATGGGCTAATATTCC
TTTACTCAGTAGTTTTGTGATTTGCATGTTGCAATAGACGGTGTAGTCTG
TACGGGGGCTGCCTTTTGTGACCAAACCTTGTCAAACCTCTTGCCGAGTC
CATGACCCAGTAAGGAAGCGAGGCCGTTTGGTACGAAACTGCATCATGGC
AGGGGGCTAGAGAGTGGGTTCAGGGGAGGAAGGTACAGGCGGGCATATCA
CTGGCCCGCACCTGTTTGTATAATTTTTTCGGTATGGTTGGCAATTTGTG
GCGATGCGAGAAGGACGTTGCTGCTCAGTCTGGGCGTCGTGATGTATAGT
GTTCAAGATCTTGGGTTCAGCAGATACTGCGCCCAATTGTATCTGATGAG
GTTTGAAGCTACAAACGGAACAGAATTATGACCTCGTGTAAAGGTGGTTT
TGGCACTGCGGCTGATTTAATCCCGGCGAAGCCGCCGACCACGAGGGTGC
CGCAGATCAGTGGAAGTTCAAAATGACAAATTTGCGGGTCCAACACATAG
CCGGTTGACAGATTCCTCTTCTGACTCGACTTCGTGGAGAGGGGTCCATT
CCCGTGTTCTGCTGCTCTCTCGATAAGAGCGCGTCCGCCTCTCGATAGCT
CTCTAGACAAAATTTTGGAACACACGCTTAAGCGTGTCAAGAGTACCATT
GTGTTGGAAAAACCGAGAATGACCATATCGGAGTGTCCTCATGTGTTTCA
TGCGTCGTGTAGAGTGGCACTCTTCACAGCGAACGGTACAACATTCCCTA
CGGGAAGATGTAATCTTGCAGAGGTTAACATACTGTCGGAGAGTGAACCA
AGGCGCACACCACGTTTCGCCGATAATCGATCGCATCGGTGGCGTTACGC
GGAGATGAATAACATTACTCTTGATCCTTCTTCGTACAGGGTAACAAAAG
CGGGGGGAGAAGCTTTCCTGTTAGAGATGGGAAGCGTCGCCCCTGTTCGT
CCTGAAGAATTTAGCAGTCGCTACGAGAGTTCTGAAAGAAATTACTTTTC
GTTGTTTACCGTCGCGCGGAAGGCTGAAAAAATATAGACGCTTTGGTTGG
CAGTGAAAATGCTATTTATTCCCAATGGCTTGGGTCGGGC

Coding sequence (CDS) from alignment at H-paniculata_contig4654:409..8298-

>mRNA_H-paniculata_contig4654.11608.1 ID=mRNA_H-paniculata_contig4654.11608.1|Name=mRNA_H-paniculata_contig4654.11608.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1710bp|location=Sequence derived from alignment at H-paniculata_contig4654:409..8298- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAGTACACTGCATCTATTCTACTGGGCGGCGCAGATGAAGTACACTG
CATCTATTCTACTGGGCGGCGCAGCCTGCGCGTCGGCGTTCGTCGGCACC
CCACTCCGTGCCTCATGCGCTCTCAAGTCTTCCAAGGTCTCCATGAGCGC
GTCGAGCCCGGTTGACACAATGACACGGGGCGAGGTCATCAAGCCTGCGC
GTCGGCGTTCGTCGGCACCCCACTCCGTGCCTCATGCGCTCTCAAGTCTT
CCAAGGTCTCCATGAGCGCGTCGAGCCCGGTTGACACAATGACACGGGGC
GAGGTCATCAAGGCTGCCACGGCATCTGCCCTGGCCGCTGGAGTAATGTT
CTCGGGCGCGTTCCCCGCCGCCGCGGATGGGCCATACTTTGTCCCTGACC
TTCCGTACCCTTACGAGGCCCTCGAACCGCACATCGATGCGGCCACTATG
AAGGCTGCCACGGCATCTGCCCTGGCCGCTGGAGTAATGTTCTCGGGCGC
GTTCCCCGCCGCCGCGGATGGGCCATACTTTGTCCCTGACCTTCCGTACC
CTTACGAGGCCCTCGAACCGCACATCGATGCGGCCACTATGAAGTTCCAC
CATGACAAGCACCACGCCGCGTACGTGGCCAACACCAACAAGTTCCACCA
TGACAAGCACCACGCCGCGTACGTGGCCAACACCAACAAGGCAATGGCCG
GCAAGCCGACGCCACCTATCGTGGAGCTTCAGAAGGGCGCTATCAAGGCC
GGAACGCGCAACGCTGTTGGAGGCAATGGCCGGCAAGCCGACGCCACCTA
TCGTGGAGCTTCAGAAGGGCGCTATCAAGGCCGGAACGCGCAACGCTGTT
GGAGGCCACTACAACCACTGCCTGTTCTGGAACACCTTGTGCGCCGGCGC
CAGCAGCGGGTCGCCATCTCCCGATGCCACTACAACCACTGCCTGTTCTG
GAACACCTTGTGCGCCGGCGCCAGCAGCGGGTCGCCATCTCCCGATCTGG
CGAAGGCGATCGACGCGGAATTTGGGTCGATGGATGCGATGAAGGAGAAG
TTCAACGCTGCTGCGGCGGGCGTGTTCGGGTCCGGATGGGCTTGGTTGGG
GTGCACCAAGGACGGAAAGCTAGCAATCACCGGCACCCCCAACCAGGCTG
GCGAAGGCGATCGACGCGGAATTTGGGTCGATGGATGCGATGAAGGAGAA
GTTCAACGCTGCTGCGGCGGGCGTGTTCGGGTCCGGATGGGCTTGGTTGG
GGTGCACCAAGGACGGAAAGCTAGCAATCACCGGCACCCCCAACCAGGAC
AACCCGTTAATGGACGGTGCGGCGGGTACGCCCATGGTACCCATCCTCGG
GCTTGACGTCTGGGAACACGCCTACTACCTAAAGTACCAAAACCGCCGGC
CGGAGTACATCGGCGCCTTCTGGAATGTTGTCAACTGGGCTGTGACAACC
CGTTAATGGACGGTGCGGCGGGTACGCCCATGGTACCCATCCTCGGGCTT
GACGTCTGGGAACACGCCTACTACCTAAAGTACCAAAACCGCCGGCCGGA
GTACATCGGCGCCTTCTGGAATGTTGTCAACTGGGCTGTGGTGTCGGAGA
ACTACGAGATGTACGCCTCGAAGGGACGCCCGGTGCCCGTCATGGGCTAA
GTGTCGGAGAACTACGAGATGTACGCCTCGAAGGGACGCCCGGTGCCCGT
CATGGGCTAA