mRNA_H-paniculata_contig4649.11599.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig4649.11599.1 vs. uniprot
Match: D7FI32_ECTSI (T-complex protein 1 subunit epsilon n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI32_ECTSI) HSP 1 Score: 568 bits (1465), Expect = 1.520e-200 Identity = 288/306 (94.12%), Postives = 298/306 (97.39%), Query Frame = 1
Query: 1 FVYLQMPKAVKDAKLCLLTCPFEPPKPKTKHKLDINSRDAYEKLFEREQKYFADMVQQCKDVGTNLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGARIVPRFSELTEAKLGKAGAVREVHFGTTKERMLVIEDCSNSSAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKDKRIVYGGGSAEISCSVAVSRMADEISGVEQYAVRSFADALDDVPMALAENAGLSPITELSAVKSKQIADGISTLGIDCNQMGTCDMKEQGIFETLIGKQQQLLLATQVVKMILKIDDVIMMGNY 918
F + QMPK VKDAKLCLLTCPFEPPKPKTKHKLDI S+DAYEKLFEREQKYFADMVQQCKDVGTNLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGARIVPRFSELT KLGKAGAVREV FGTTK+RMLVIEDCSNSSAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKDKRIVYGGGSAEISCSVAVSRMADEI GVEQYAVRSFADALDDVPMALAEN+GLSPITELSAVKS+QIA+GI++LGIDCNQ+GTCDMKEQGIFETLIGKQQQLLLATQVVKMILK+DDVIMMGNY
Sbjct: 230 FSHAQMPKVVKDAKLCLLTCPFEPPKPKTKHKLDITSKDAYEKLFEREQKYFADMVQQCKDVGTNLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGARIVPRFSELTGEKLGKAGAVREVSFGTTKDRMLVIEDCSNSSAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKDKRIVYGGGSAEISCSVAVSRMADEIKGVEQYAVRSFADALDDVPMALAENSGLSPITELSAVKSRQIAEGITSLGIDCNQVGTCDMKEQGIFETLIGKQQQLLLATQVVKMILKVDDVIMMGNY 535
BLAST of mRNA_H-paniculata_contig4649.11599.1 vs. uniprot
Match: A0A835ZI55_9STRA (T-complex protein 1 subunit epsilon n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI55_9STRA) HSP 1 Score: 496 bits (1276), Expect = 9.700e-172 Identity = 251/306 (82.03%), Postives = 271/306 (88.56%), Query Frame = 1
Query: 1 FVYLQMPKAVKDAKLCLLTCPFEPPKPKTKHKLDINSRDAYEKLFEREQKYFADMVQQCKDVGTNLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGARIVPRFSELTEAKLGKAGAVREVHFGTTKERMLVIEDCSNSSAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKDKRIVYGGGSAEISCSVAVSRMADEISGVEQYAVRSFADALDDVPMALAENAGLSPITELSAVKSKQIADGISTLGIDCNQMGTCDMKEQGIFETLIGKQQQLLLATQVVKMILKIDDVIMMGNY 918
F + QMPK +KDAKLC+LTCPFEPPKPKTKHKLDI S++AYE+L EREQ+YF MV+QCKD G NLVICQWGFDDEANHLLLQN LPAVRWVGGVELELIAIATG RIVPRF EL+ KLG AG VREV FGTTK+RMLVIE C NS+AVTVLVRGGNKMIV+EAKRSLHDAMCVVRNLIKD RIVYGGGSAEI+CS+ VS AD I GVEQYAVR+FADALDDVPMALAEN+GLSPI+ELSAVK+ Q+ DG S LGIDCNQ GT DMK Q IFETLIGKQQQLLLATQVVKMILKIDD+I MG Y
Sbjct: 237 FSHPQMPKEIKDAKLCILTCPFEPPKPKTKHKLDITSKEAYERLHEREQQYFDTMVKQCKDSGANLVICQWGFDDEANHLLLQNDLPAVRWVGGVELELIAIATGGRIVPRFQELSADKLGYAGTVREVAFGTTKDRMLVIEGCKNSNAVTVLVRGGNKMIVDEAKRSLHDAMCVVRNLIKDNRIVYGGGSAEIACSIEVSNAADAIGGVEQYAVRAFADALDDVPMALAENSGLSPISELSAVKAAQVKDGNSHLGIDCNQEGTADMKTQRIFETLIGKQQQLLLATQVVKMILKIDDIITMGQY 542
BLAST of mRNA_H-paniculata_contig4649.11599.1 vs. uniprot
Match: A0A7S0SVG4_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SVG4_9STRA) HSP 1 Score: 485 bits (1248), Expect = 1.060e-170 Identity = 236/306 (77.12%), Postives = 274/306 (89.54%), Query Frame = 1
Query: 1 FVYLQMPKAVKDAKLCLLTCPFEPPKPKTKHKLDINSRDAYEKLFEREQKYFADMVQQCKDVGTNLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGARIVPRFSELTEAKLGKAGAVREVHFGTTKERMLVIEDCSNSSAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKDKRIVYGGGSAEISCSVAVSRMADEISGVEQYAVRSFADALDDVPMALAENAGLSPITELSAVKSKQIADGISTLGIDCNQMGTCDMKEQGIFETLIGKQQQLLLATQVVKMILKIDDVIMMGNY 918
F + QMPK +KDAK+C+LTCPFEPPKPKTKHKLDI S++AY+KL+ REQ+YF MV+QCKD G NLVICQWGFDDEANHLLLQN+LPAVRWVGGVELELIAIATG RIVPRF ELT KLGKAG VREV FGTTKE+MLVIEDC+ S+AVTVL+RGGNKMIVEEAKRSLHDAMCVVRNLI+D R+VYGGGSAEISC++AVS AD + G+EQYA+R+FADAL+D+PMALAENAGLSPI E++ +K++Q+++ LG+DCNQ+G+ DMKE +FETLIGKQQQL LATQVVKMILKIDDVIM G+Y
Sbjct: 24 FSHPQMPKEIKDAKICILTCPFEPPKPKTKHKLDITSKEAYDKLYLREQEYFTTMVKQCKDSGANLVICQWGFDDEANHLLLQNELPAVRWVGGVELELIAIATGGRIVPRFQELTSDKLGKAGLVREVSFGTTKEKMLVIEDCACSNAVTVLIRGGNKMIVEEAKRSLHDAMCVVRNLIRDNRVVYGGGSAEISCALAVSSYADTVPGIEQYAIRAFADALEDIPMALAENAGLSPINEVTTIKARQLSENNPRLGVDCNQLGSNDMKEHLVFETLIGKQQQLQLATQVVKMILKIDDVIMFGSY 329
BLAST of mRNA_H-paniculata_contig4649.11599.1 vs. uniprot
Match: A0A7S2SNU9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SNU9_9STRA) HSP 1 Score: 487 bits (1254), Expect = 5.170e-170 Identity = 243/306 (79.41%), Postives = 271/306 (88.56%), Query Frame = 1
Query: 1 FVYLQMPKAVKDAKLCLLTCPFEPPKPKTKHKLDINSRDAYEKLFEREQKYFADMVQQCKDVGTNLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGARIVPRFSELTEAKLGKAGAVREVHFGTTKERMLVIEDCSNSSAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKDKRIVYGGGSAEISCSVAVSRMADEISGVEQYAVRSFADALDDVPMALAENAGLSPITELSAVKSKQIADGISTLGIDCNQMGTCDMKEQGIFETLIGKQQQLLLATQVVKMILKIDDVIMMGNY 918
F + QMPK V+DAK+C+LTCPFEPPKPKTKHKLDI SR+AYEKL+++EQ YF +MVQQCKD G NLVICQWGFDDEANHLLLQN LPAVRWVGGVELELIAIATG RIVPRFSEL+ KLG+AG VREV FGT KERMLVIEDC+NSSAVT+LVRGGN MIVEEAKRSLHDAMCVVRNLIKD RIVYGGG+AEI+CS A+S+ AD + G EQYA+R+FADALDD+PMALAEN+G SPI++LSAVKS+Q+ + LGIDC GT DMKEQ +FETLIGKQQQLLLATQVVKMILKIDDVIM G Y
Sbjct: 128 FSHPQMPKVVEDAKMCILTCPFEPPKPKTKHKLDITSREAYEKLYDQEQAYFKEMVQQCKDCGANLVICQWGFDDEANHLLLQNDLPAVRWVGGVELELIAIATGGRIVPRFSELSAEKLGRAGTVREVAFGTLKERMLVIEDCANSSAVTILVRGGNSMIVEEAKRSLHDAMCVVRNLIKDNRIVYGGGAAEIACSNAISKYADTVVGTEQYALRAFADALDDIPMALAENSGFSPISQLSAVKSRQVTEQNPHLGIDCKAKGTNDMKEQLVFETLIGKQQQLLLATQVVKMILKIDDVIMHGQY 433
BLAST of mRNA_H-paniculata_contig4649.11599.1 vs. uniprot
Match: W7TKH6_9STRA (T-complex protein 1 subunit epsilon n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKH6_9STRA) HSP 1 Score: 488 bits (1256), Expect = 8.310e-169 Identity = 241/302 (79.80%), Postives = 271/302 (89.74%), Query Frame = 1
Query: 13 QMPKAVKDAKLCLLTCPFEPPKPKTKHKLDINSRDAYEKLFEREQKYFADMVQQCKDVGTNLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGARIVPRFSELTEAKLGKAGAVREVHFGTTKERMLVIEDCSNSSAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKDKRIVYGGGSAEISCSVAVSRMADEISGVEQYAVRSFADALDDVPMALAENAGLSPITELSAVKSKQIADGISTLGIDCNQMGTCDMKEQGIFETLIGKQQQLLLATQVVKMILKIDDVIMMGNY 918
QMPK +KDAK+ +LTCPFEPPKPKTKHKLDI+SR+AYE+L+EREQ+YF MV+QCKD G NL+ICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATG RIVPRFSEL+ KLG+AG VREV FGTTKERMLVIEDC+ S AVT+LVRGGNKMIVEEAKRSLHDAMCVVRNLIKD RIVYGGGSAEISCS+AV++ AD +GV+QYA+R+FADALDDVPMALAENAGLSPITELS VKS+QI DG +G+DC Q G DM+ Q IFETLIGKQQQ LATQ+V+M+LKIDDV+M GN+
Sbjct: 234 QMPKTIKDAKIAILTCPFEPPKPKTKHKLDISSREAYERLYEREQEYFTTMVRQCKDSGANLIICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGGRIVPRFSELSPEKLGRAGLVREVAFGTTKERMLVIEDCAKSQAVTILVRGGNKMIVEEAKRSLHDAMCVVRNLIKDNRIVYGGGSAEISCSIAVAKAADTETGVDQYAIRAFADALDDVPMALAENAGLSPITELSQVKSQQIKDGNPHIGVDCMQSGVADMRTQRIFETLIGKQQQFQLATQLVRMVLKIDDVLMHGNF 535
BLAST of mRNA_H-paniculata_contig4649.11599.1 vs. uniprot
Match: A0A7S3HCP3_9STRA (T-complex protein 1 subunit epsilon n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HCP3_9STRA) HSP 1 Score: 488 bits (1255), Expect = 1.180e-168 Identity = 238/307 (77.52%), Postives = 276/307 (89.90%), Query Frame = 1
Query: 1 FVYLQMPKAVKDAKLCLLTCPFEPPKPKTKHKLDINSRDAYEKLFEREQKYFADMVQQCKDVGTNLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGARIVPRFSELTEAKLGKAGAVREVHFGTTKERMLVIEDCSNSSAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKDKRIVYGGGSAEISCSVAVSRMADEISGVEQYAVRSFADALDDVPMALAENAGLSPITELSAVKSKQIADGISTLGIDCNQMGTCDMKEQGIFETLIGKQQQLLLATQVVKMILKIDDVIMMGNYT 921
F + QMPK +KDAK+C+LTCPFEPPKPKTKHK+DI S++AY+KL++ EQ YF MV+QCKD G NLVICQWGFDDEANHLLLQN LPAVRWVGGVELELIAIATG RIVPRFSEL+EAKLG+AG VREV FGTTKERMLVIEDC+ S+AVTVL+RGGNKMIV+EA RSLHDAMCVVRNLIKD R+VYGGGSAEI+CS+AVS AD + G+EQYA+R+FADALDD+PMALAENAGLSPITE++++K++Q+A+G LG+DCNQ+G+ DMK+ +FETLIGK QQL LATQVVKMILKIDDVIM G YT
Sbjct: 230 FSHPQMPKEIKDAKMCILTCPFEPPKPKTKHKMDITSKEAYDKLYKYEQDYFTTMVKQCKDSGANLVICQWGFDDEANHLLLQNGLPAVRWVGGVELELIAIATGGRIVPRFSELSEAKLGRAGTVREVSFGTTKERMLVIEDCACSNAVTVLIRGGNKMIVDEAHRSLHDAMCVVRNLIKDNRVVYGGGSAEIACSLAVSAFADTVPGIEQYAIRAFADALDDLPMALAENAGLSPITEVTSIKARQLAEGNPRLGVDCNQIGSNDMKDHLVFETLIGKMQQLQLATQVVKMILKIDDVIMYGGYT 536
BLAST of mRNA_H-paniculata_contig4649.11599.1 vs. uniprot
Match: A0A7S2BNZ2_9STRA (T-complex protein 1 subunit epsilon n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BNZ2_9STRA) HSP 1 Score: 483 bits (1242), Expect = 1.100e-166 Identity = 241/306 (78.76%), Postives = 273/306 (89.22%), Query Frame = 1
Query: 1 FVYLQMPKAVKDAKLCLLTCPFEPPKPKTKHKLDINSRDAYEKLFEREQKYFADMVQQCKDVGTNLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGARIVPRFSELTEAKLGKAGAVREVHFGTTKERMLVIEDCSNSSAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKDKRIVYGGGSAEISCSVAVSRMADEISGVEQYAVRSFADALDDVPMALAENAGLSPITELSAVKSKQIADGISTLGIDCNQMGTCDMKEQGIFETLIGKQQQLLLATQVVKMILKIDDVIMMGNY 918
F + QMPK V DAK+C+LTCPFEPPKPKTKHKLDI S++AY+KL E+EQ+YF MV+QCKD G NLVICQWGFDDEANHLLLQN LPAVRWVGGVELELIAIATG RIVPRFSELT KLGKAG VREV FGT KERMLV+EDC+NS+AVTVLVRGGN MIVEEAKRSLHDAMCVVRNLIK+ RIVYGGG+AEI+CS A++ AD+ +GV+QYA+R+FADAL+D+PMALAEN+GLSPIT+LSAVKS+Q+ +G LGIDC + GT DMK+Q +FETLIGKQQQLLLATQVVKMILKIDDVIM G Y
Sbjct: 230 FSHPQMPKEVIDAKMCILTCPFEPPKPKTKHKLDITSKEAYDKLHEQEQEYFTQMVKQCKDSGANLVICQWGFDDEANHLLLQNDLPAVRWVGGVELELIAIATGGRIVPRFSELTSEKLGKAGRVREVAFGTLKERMLVVEDCANSNAVTVLVRGGNSMIVEEAKRSLHDAMCVVRNLIKNNRIVYGGGAAEIACSNAITAQADDKTGVDQYALRAFADALEDIPMALAENSGLSPITQLSAVKSRQVTEGNPHLGIDCKRAGTNDMKDQLVFETLIGKQQQLLLATQVVKMILKIDDVIMHGAY 535
BLAST of mRNA_H-paniculata_contig4649.11599.1 vs. uniprot
Match: A0A7S4E7P5_9STRA (T-complex protein 1 subunit epsilon n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E7P5_9STRA) HSP 1 Score: 478 bits (1231), Expect = 5.680e-165 Identity = 237/302 (78.48%), Postives = 267/302 (88.41%), Query Frame = 1
Query: 13 QMPKAVKDAKLCLLTCPFEPPKPKTKHKLDINSRDAYEKLFEREQKYFADMVQQCKDVGTNLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGARIVPRFSELTEAKLGKAGAVREVHFGTTKERMLVIEDCSNSSAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKDKRIVYGGGSAEISCSVAVSRMADEISGVEQYAVRSFADALDDVPMALAENAGLSPITELSAVKSKQIADGISTLGIDCNQMGTCDMKEQGIFETLIGKQQQLLLATQVVKMILKIDDVIMMGNY 918
QMPK ++D K+C+LTCPFEPPKPKTKHKLDI+S++ Y+KLF+REQ YF DMV+QCK G NLVICQWGFDDEANHLLLQ +LPAVRWVGGVELELIAIATG RIVPRFSEL +KLG+AG VREV FGTTKERMLVIEDC++S AVTVLVRGGNKMIVEEAKRSLHDAMCVVRNL++D RIVYGGG+AEI+CSVAVS+ AD +G EQYA+R+FADALDDVPMALAEN+GLSPI EL+AVK+ Q+A LG+DC Q GT DMK Q +FETLIGKQQQ+ LATQVVKMILKIDDVIM G Y
Sbjct: 237 QMPKEIRDVKMCILTCPFEPPKPKTKHKLDISSKEDYDKLFQREQAYFGDMVEQCKACGANLVICQWGFDDEANHLLLQAELPAVRWVGGVELELIAIATGGRIVPRFSELDASKLGRAGVVREVSFGTTKERMLVIEDCASSEAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLVRDNRIVYGGGAAEIACSVAVSKAADAATGPEQYAIRAFADALDDVPMALAENSGLSPIAELTAVKAAQVAQNCPFLGVDCLQQGTNDMKRQKVFETLIGKQQQVQLATQVVKMILKIDDVIMSGAY 538
BLAST of mRNA_H-paniculata_contig4649.11599.1 vs. uniprot
Match: A0A2P4WVM5_9STRA (T-complex protein 1, epsilon subunit n=2 Tax=Peronosporaceae TaxID=4777 RepID=A0A2P4WVM5_9STRA) HSP 1 Score: 469 bits (1207), Expect = 6.740e-165 Identity = 233/301 (77.41%), Postives = 266/301 (88.37%), Query Frame = 1
Query: 16 MPKAVKDAKLCLLTCPFEPPKPKTKHKLDINSRDAYEKLFEREQKYFADMVQQCKDVGTNLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGARIVPRFSELTEAKLGKAGAVREVHFGTTKERMLVIEDCSNSSAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKDKRIVYGGGSAEISCSVAVSRMADEISGVEQYAVRSFADALDDVPMALAENAGLSPITELSAVKSKQIADGISTLGIDCNQMGTCDMKEQGIFETLIGKQQQLLLATQVVKMILKIDDVIMMGNY 918
MPK VKDAK+C+LTCPFEPPKPKTKHKLDI S +AYEKL+++EQ+YF M++Q KD G NLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATG RIVPRFSELT KLG+AG VREV FGTTKE MLVIEDC++S A+TVLVRGGNKMIVEEAKRSLHDAMCV RNLIK+ RIVYGGG+AEI+C +AV AD +G+EQYA+R+FADAL+DVPMALAEN+GL+PI LSAV+++Q+A+ LGIDCN GT DMKEQ +FETLIGKQQQL LATQVV+MILKIDDVI+ G+Y
Sbjct: 1 MPKEVKDAKMCILTCPFEPPKPKTKHKLDITSVEAYEKLYKQEQEYFTTMIKQVKDSGANLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGGRIVPRFSELTAEKLGRAGTVREVAFGTTKELMLVIEDCASSDAITVLVRGGNKMIVEEAKRSLHDAMCVTRNLIKNNRIVYGGGAAEIACGIAVREHADNTTGIEQYAIRAFADALEDVPMALAENSGLNPIDSLSAVRAQQLAEKNPRLGIDCNSSGTNDMKEQQVFETLIGKQQQLQLATQVVRMILKIDDVIIEGSY 301
BLAST of mRNA_H-paniculata_contig4649.11599.1 vs. uniprot
Match: F0YIY6_AURAN (T-complex protein 1 subunit epsilon n=3 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YIY6_AURAN) HSP 1 Score: 479 bits (1233), Expect = 8.650e-164 Identity = 239/302 (79.14%), Postives = 270/302 (89.40%), Query Frame = 1
Query: 13 QMPKAVKDAKLCLLTCPFEPPKPKTKHKLDINSRDAYEKLFEREQKYFADMVQQCKDVGTNLVICQWGFDDEANHLLLQNQLPAVRWVGGVELELIAIATGARIVPRFSELTEAKLGKAGAVREVHFGTTKERMLVIEDCSNSSAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLIKDKRIVYGGGSAEISCSVAVSRMADEISGVEQYAVRSFADALDDVPMALAENAGLSPITELSAVKSKQIADGISTLGIDCNQMGTCDMKEQGIFETLIGKQQQLLLATQVVKMILKIDDVIMMGNY 918
QM K +KDAK+C+LTCPFEPPKPKTKHKLDI S++ Y+KLF REQ YF +MV QCK G N+VICQWGFDDEANHLLLQ LPAVRWVGGVELELIAIATG RIV RFSEL+EAKLGKAG VREV FGTTKERMLVIEDC++S AVTVLVRGGNKMIVEEAKRSLHDAMCVVRNL+KD RIVYGGG+AEI+CS+AVS+ AD+ +G +QYA+R+FADALDDVPMALAEN+GLSPITEL+AVK+KQ+A+ LG+DC Q GT DMK+Q +FETLIGKQQQ+ LATQVVKMILKIDDVIM G+Y
Sbjct: 343 QMAKEIKDAKMCILTCPFEPPKPKTKHKLDITSKEDYDKLFAREQHYFTEMVAQCKACGANMVICQWGFDDEANHLLLQAGLPAVRWVGGVELELIAIATGGRIVARFSELSEAKLGKAGCVREVAFGTTKERMLVIEDCASSEAVTVLVRGGNKMIVEEAKRSLHDAMCVVRNLVKDNRIVYGGGAAEIACSIAVSQAADDATGQDQYAIRAFADALDDVPMALAENSGLSPITELTAVKAKQLAEKNPNLGVDCLQQGTNDMKQQKVFETLIGKQQQVQLATQVVKMILKIDDVIMHGSY 644 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4649.11599.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4649.11599.1 >prot_H-paniculata_contig4649.11599.1 ID=prot_H-paniculata_contig4649.11599.1|Name=mRNA_H-paniculata_contig4649.11599.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=303bp MPKAVKDAKLCLLTCPFEPPKPKTKHKLDINSRDAYEKLFEREQKYFADMback to top mRNA from alignment at H-paniculata_contig4649:9259..15059- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4649.11599.1 ID=mRNA_H-paniculata_contig4649.11599.1|Name=mRNA_H-paniculata_contig4649.11599.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5801bp|location=Sequence derived from alignment at H-paniculata_contig4649:9259..15059- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4649:9259..15059- >mRNA_H-paniculata_contig4649.11599.1 ID=mRNA_H-paniculata_contig4649.11599.1|Name=mRNA_H-paniculata_contig4649.11599.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1818bp|location=Sequence derived from alignment at H-paniculata_contig4649:9259..15059- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |