mRNA_H-paniculata_contig4644.11590.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig4644.11590.1 vs. uniprot
Match: D7FVW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVW9_ECTSI) HSP 1 Score: 304 bits (779), Expect = 5.630e-90 Identity = 164/328 (50.00%), Postives = 225/328 (68.60%), Query Frame = 2
Query: 548 KLIYLDPKTITAAQISEIIDLVSKAFVDFNKSLTTNVHQDLMDEEFGDATIAAIAIKGIATSRDGFALL-DGEDGRMVGVSYVDVNAPGPNKVAELGPVCSLSPGAGRKTFEAACQHAEKLGFNVLVLQQVAANNRSFSLYAKVGFEAKHTCHYFGGFLSADSND------ADSGVSCTISEMTEKDVEECGALFTAAYGYDC-WDRRPSIVHQMAGEQPFPILVARGADGEVVGYSTGFYLDGHQVTQSEDAFKALFRESSRIHKENHLPTPKFHNFMEYPSLVSWALAEK-LILLRTTVVMVKGPYNHT-WPQN-GYVITPSIGGW 1498
+L+++DPK+I +Q+ E+ +VSKAF DFN S+ T V ++ +EEFG I I+ I S +G+A++ DG G++VGVS+VDV+A G +KVA LGPV SL+ GAG+K+F AAC +AE+LGF+ L+L Q+AAN+RSFSLYAK+GFE KHT Y GGFL S A SGV T+ M DVEEC LF A+G DC WDRR I + PFP+LVAR A+G+VVGYSTGF++ GH V +S+D F +FRE S++HK+ LP PKF+ +E+ L+SW LA+K L + R +++M +G Y HT WP G+++ PS G+
Sbjct: 5 ELVFIDPKSINDSQVDEVTQVVSKAFQDFNTSINTPV--EVYEEEFGHPAIGPTVIQSICKSYEGYAVVEDGGAGKIVGVSFVDVHAKG-SKVATLGPVASLASGAGKKSFVAACDYAEELGFSTLILTQIAANSRSFSLYAKLGFETKHTVQYIGGFLEQPSEGSLPLPPAPSGV--TLKAMVAGDVEECAELFLEAHGKDCGWDRRADITGCLGSGFPFPMLVARDANGKVVGYSTGFFMIGHTVAKSQDIFCYMFREGSKLHKQAGLPCPKFYCPVEFTGLLSWCLAQKGLKVFRASLIMARGHYEHTPWPNAAGHIVAPSTTGY 327
BLAST of mRNA_H-paniculata_contig4644.11590.1 vs. uniprot
Match: D7FRH6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRH6_ECTSI) HSP 1 Score: 301 bits (770), Expect = 9.970e-89 Identity = 166/328 (50.61%), Postives = 223/328 (67.99%), Query Frame = 2
Query: 545 MKLIYLDPKTITAAQISEIIDLVSKAFVDFNKSLTTNVHQDLMDEEFGDATIAAIAIKGIATSRDGFALL-DGEDGRMVGVSYVDVNAPGPNKVAELGPVCSLSPGAGRKTFEAACQHAEKLGFNVLVLQQVAANNRSFSLYAKVGFEAKHTCHYFGGFLSADSND------ADSGVSCTISEMTEKDVEECGALFTAAYGYDC-WDRRPSIVHQMAGEQPFPILVARGADGEVVGYSTGFYLDGHQVTQSEDAFKALFRESSRIHKENHLPTPKFHNFMEYPSLVSWALAEK-LILLRTTVVMVKGPYNHTWPQN--GYVITPSIGG 1495
++L +LDPKTI +Q+ E+ +VS+AF DFN S+ V ++ +EEFG I+ I S + +A++ DG G++VGVS+VDV+A G ++VA LGPV S++PGAG+K+F AAC +AE+LGF+ LVL Q+AAN+RSFSLYAK+GFE KHTC Y GGFL S A SGV T+ M DVEEC +F A+G C WDRR I + PFP+LVAR ADG+VVGY+TGFYL GH V +S+D F +FRESS++H++ LP P+FH +E+ L+SWALA+K L + R T+VM +G Y HT Q+ G V+ PS G
Sbjct: 4 LELAFLDPKTIKDSQMDEVTHVVSRAFQDFNTSIGAPV--EVYEEEFGHPETGPGIIQSICKSHEAYAVVADGGAGKIVGVSFVDVHAKG-SRVACLGPVSSIAPGAGKKSFVAACAYAEELGFSTLVLMQIAANSRSFSLYAKLGFETKHTCQYMGGFLEPPSEGSLSPPPAPSGV--TLKAMVAGDVEECAEMFLEAHGKGCGWDRRADITGCLESGAPFPMLVARDADGKVVGYTTGFYLMGHTVAKSQDIFCDMFRESSKLHQQAGLPCPRFHCPVEFTGLLSWALAQKGLRIFRATIVMARGHYEHTPWQDAIGNVVAPSASG 326
BLAST of mRNA_H-paniculata_contig4644.11590.1 vs. uniprot
Match: D7FRH7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH7_ECTSI) HSP 1 Score: 126 bits (316), Expect = 1.130e-29 Identity = 70/135 (51.85%), Postives = 99/135 (73.33%), Query Frame = 2
Query: 590 ISEIIDLVSKAFVDFNKSLTTNVHQDLMDEEFGDATIAAIAIKGIATSRDGFALL-DGEDGRMVGVSYVDVNAPGPNKVAELGPVCSLSPGAGRKTFEAACQHAEKLGFNVLVLQQVAANNRSFSLYAKVGFEAK 991
+ E+ +VSKAF DFN S+ V ++ +EEFG I+ I S + +A++ DG G++VGVS+VDV+A G ++VA LGPV S++PGAG+K+F AAC +AE+LGF+ LVL Q+AAN+RSFSLYAK+GFE +
Sbjct: 1 MDEVTHVVSKAFQDFNTSMGAPV--EVYEEEFGHPETGPGIIQSICKSHEAYAVVADGGAGKIVGVSFVDVHAKG-SRVACLGPVSSIAPGAGKKSFVAACAYAEELGFSTLVLMQIAANSRSFSLYAKLGFEGQ 132
BLAST of mRNA_H-paniculata_contig4644.11590.1 vs. uniprot
Match: Q2YCR7_NITMU (GCN5-related N-acetyltransferase n=5 Tax=Nitrosomonadales TaxID=32003 RepID=Q2YCR7_NITMU) HSP 1 Score: 71.2 bits (173), Expect = 1.810e-9 Identity = 77/290 (26.55%), Postives = 127/290 (43.79%), Query Frame = 2
Query: 638 KSLTTNVHQDLMDEEFGDATIAAIAIKGIATSRDGFALLDGEDGRMVGVSYVDVNAPGPNKVAELGPVCSL----SPGAGRKTFEAACQHAEKLGFNVLVLQQVAANNRSFSLYAKVGFEAKHTCHYFGGF-LSADSNDADSGVSCTISEMTEKDVEECGALFTAAYGYDCWDRRPSIVHQMAGEQPFPILVARGADGEVVGYSTGFYLDGHQVTQSEDAFKALFRESSRIHKENHL-PTPKFHNFMEYPSLVSWALAEKLILLRTTVVMVKGPYNHTWPQNGYVITPSI 1489
++ T Q + +F +A + G+ + D ++++ +GR++G +++ ++ +A +GP+ + S GR E +HA F + L Q A NNRS SLY K+GFE + G L D SG + + +D C AL +G+D R + G+Q ++V G G + GY+T GH V +S + KAL ++ L PT HN L W L + L +++ +M G YN P ++ PSI
Sbjct: 22 EAFRTISQQHGFEPDFPSFEVARDLLLGLLSRPDVYSVVAESEGRIIGSNFLWQDSA----IAGIGPLTVIPETQSDRVGRGLMEDVLEHARNKHFAGVRLVQAAYNNRSLSLYTKLGFEVREPLATLQGAPLQIDI----SGYN--VRPARAEDANACDALCRKIHGHD----RGQELRHAIGQQT-AMVVEHG--GHITGYATLIGFTGHAVGESNEDLKALIGAAAAFAGPGFLLPT---HN----SELFRWCLQQGLRVVQPMNLMSLGLYNQ--PAGSFL--PSI 283
BLAST of mRNA_H-paniculata_contig4644.11590.1 vs. uniprot
Match: UPI0003694FED (GNAT family N-acetyltransferase n=1 Tax=Smaragdicoccus niigatensis TaxID=359359 RepID=UPI0003694FED) HSP 1 Score: 70.5 bits (171), Expect = 3.400e-9 Identity = 72/267 (26.97%), Postives = 108/267 (40.45%), Query Frame = 2
Query: 689 DATIAAIAIKGIATSRDGFALLDGEDGRMVGVSYVDVNAPGPNKVAELGPVCSLSPGAGRKTFEAACQHAEKLGFNVLVLQQVAANNRSFSLYAKVGFEAKHTCHYFGGFLSADSNDADSGVSCTISEMTEKDVEECGALFTAAYGYDCWDRRPSIVHQMAGEQPFPILVARGADGEVVGYSTGFYLDGHQVTQSEDAFKALFRESSRIHKENHLPTPKFHNFMEYPSLVSWALAEKLILLRTTVVMVKGPYNHTWPQNGYVITPSI 1489
D T A +A++ FA E G +VG+ V V+ PV + G GR + + L Q A N RSFSLYAK+GFE + F G + +N S T+ T D+ EC AL +GYD D ++A + + G + GY+TG H V +S AL +S+ ++ P + L+ W L L +++ + +M G Y PQ ++ PSI
Sbjct: 56 DGTFALVAVRDDDIIGSAFA---DERGAVVGIGPVTVD-----------PVAQDAGGVGRLLMQGLLDRERDRQAAGVRLVQTAYNYRSFSLYAKLGFEVREPLSVFNGTVPRSANP-----SQTVRPATGVDLNECNALCRRVHGYDRSD-------ELAAWTGLGMAQVVESSGRITGYATGLGYGWHAVGESNADIIALL-QSAEMYLGLGFLVPSRNT-----ELMQWCLNSGLRIVQQSTLMTIGDYPA--PQGAWL--PSI 286
BLAST of mRNA_H-paniculata_contig4644.11590.1 vs. uniprot
Match: A0A1Y1I5R8_KLENI (CCHC-type domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I5R8_KLENI) HSP 1 Score: 68.6 bits (166), Expect = 1.020e-7 Identity = 50/126 (39.68%), Postives = 63/126 (50.00%), Query Frame = 2
Query: 857 GAGRKTFEAACQHAEKLGFNVLVLQQVAANNRSFSLYAKVGFEAKHTCHYFGGFLSADSNDADSGVSCTISEMTEKDVEECGALFTAAYGYDCWDRRPSIVHQMAGEQ---PFPILVARGADGEVV 1225
G G+ +A + AEK G L L Q AN +SFSLYAK+GFE K YF GF + D T+ + E DV C ALF+AA G+ SI ++ PF + VA DGEVV
Sbjct: 1355 GVGKAIVQACLEGAEKQGAKSLRLLQNVANAKSFSLYAKLGFEPKFVATYFEGFPKYPAPTCDD---YTVRTLQEGDVAGCTALFSAANGF-------SIAETLSAHTKGWPFSMFVAV-KDGEVV 1469
BLAST of mRNA_H-paniculata_contig4644.11590.1 vs. uniprot
Match: A0A1I7HZ47_9PROT (Predicted N-acetyltransferase YhbS n=2 Tax=Nitrosospira multiformis TaxID=1231 RepID=A0A1I7HZ47_9PROT) HSP 1 Score: 63.5 bits (153), Expect = 6.520e-7 Identity = 74/290 (25.52%), Postives = 121/290 (41.72%), Query Frame = 2
Query: 638 KSLTTNVHQDLMDEEFGDATIAAIAIKGIATSRDGFALLDGEDGRMVGVSYVDVNAPGPNKVAELGPVCSLSPGA-----GRKTFEAACQHAEKLGFNVLVLQQVAANNRSFSLYAKVGFEAKHTCHYFGGF-LSADSNDADSGVSCTISEMTEKDVEECGALFTAAYGYDCWDRRPSIVHQMAGEQPFPILVARGADGEVVGYSTGFYLDGHQVTQSEDAFKALFRESSRIHKENHLPTPKFHNFMEYPSLVSWALAEKLILLRTTVVMVKGPYNHTWPQNGYVITPSI 1489
++ T Q + +F +A + + + D ++ + +GR+VG +++ ++ +A +GP+ +++P A GR E +HA F + L Q A NNRS SLY K+GFE + G L D + +D C +L +G+D R + H +A Q +V +G + GY+T GH V +S + KAL I + P F L W L + L +++ +M G YN Q V PSI
Sbjct: 22 EAFKTVSQQHGFEPDFPSFEVARDLLLTLLSRPDVYSAVAESEGRVVGSNFLWQDST----IAGIGPL-TITPEAQSGRVGRGLMEDVLEHARNKHFAGVRLVQAAYNNRSLSLYTKLGFEVREPLATLQGAPLRIDIP------GYNVRTAVVEDANACDSLCRKIHGHD---RGQELRHAIA--QQTARVVEH--EGRITGYATLIGFMGHAVGESNEDLKAL------IGAADSFAGPGFLLPARNSELFRWCLKQGLRVVQPMNLMSLGLYN----QPSGVFLPSI 283
BLAST of mRNA_H-paniculata_contig4644.11590.1 vs. uniprot
Match: A0A2R5H507_9MYCO (N-acetyltransferase domain-containing protein n=1 Tax=Mycobacterium montefiorense TaxID=154654 RepID=A0A2R5H507_9MYCO) HSP 1 Score: 62.4 bits (150), Expect = 1.550e-6 Identity = 73/314 (23.25%), Postives = 127/314 (40.45%), Query Frame = 2
Query: 569 KTITAAQISEIIDLVSKAFVDFNKSLTTNVHQDLMDEEFGDATIAAIAIKGIATSRDGFALLDGEDGRMVGVSYVDVNAPGPNKVAELGPVCSLSPG----AGRKTFEAACQHAEKLGFNVLVLQQVAANNRSFSLYAKVGFEAKHTCHYFGGF-LSADSNDADSGVSCTISEMTEKDVEECGALFTAAYGYD-CWDRRPSIVHQMAGEQPFPILVARGADGEVVGYSTGFYLDGHQVTQSEDAFKALFRESSRIHKENHLPTPKFHNFMEYPSLVSWALAEKLILLRTTVVMVKGPYNHTWPQNGYVITPSIG 1492
+T+T A +E + KAF + +F A + + + + F+++ D ++G +++D + ++ +GPV + AGR +A + + + L QVA NNRS SLY K+GF+ + G L+ N D + E+D+ +C L +G+D + R +I H A +V R DG + GY+T GH V S + AL + + L + L+ W + L ++ +M G Y P+ ++ PSIG
Sbjct: 5 RTMTQADTTECACICYKAF-------NAIAARHNFPSDFPSVQHAHDLVTALQSHPEYFSVVAESDDGLIGSNFLDERSA----ISSVGPVSVATDAQDSRAGRALMQAVLDRSAQQQAMGVRLVQVAYNNRSMSLYTKLGFQTREPLAVIQGTPLAMQINGFD------VRAAHEEDLADCDKLCLQVHGHDRSGELRDAIAHGSAK------VVER--DGRITGYTTDVGFAGHSVAVSNEDIIALIANADQFTWNGFLIP------LRNAELMRWCFDQGLRIVYMLNLMALGYYQE--PRGSFL--PSIG 283
BLAST of mRNA_H-paniculata_contig4644.11590.1 vs. uniprot
Match: B5HEA6_STRE2 (Acetyltransferase n=5 Tax=Streptomyces TaxID=1883 RepID=B5HEA6_STRE2) HSP 1 Score: 61.2 bits (147), Expect = 3.760e-6 Identity = 68/282 (24.11%), Postives = 113/282 (40.07%), Query Frame = 2
Query: 659 HQDLMDEEFGDATIAAIAIKGIATSRDGFALLDGEDGRMVGVSYVDVNAPGPNKVAELGPVCSLSPGA-----GRKTFEAACQHAEKLGFNVLVLQQVAANNRSFSLYAKVGFEAKHTCHYFGGFLSADSNDADSGVSCTISEMTEKDVEECGALFTAAYGYDCWDRRPSIVHQMAGEQPFPILVARGADGEVVGYSTGFYLDGHQVTQSEDAFKALFRESSRIHKENHLPTPKFHNFMEYPSLVSWALAEKLILLRTTVVMVKGPYNHTWPQNGYVITPSI 1489
H+ +F + I+ T ++++ DGR+VG +++D +P +GP+ ++ PG GR+ + A + G + L Q +NRSFSLYA +GF + T G + E T+ D+ C L +G D + Q +V R +G V GY+T H V ++ +AL + L P ++ L+ W LA L +++ +M G YN P+ Y+ PSI
Sbjct: 29 HEHGFPPDFPSPDVGVALIETALTHPGFYSVVAELDGRIVGSNFLDERSP----TVGVGPI-TIDPGVQNQGVGRRLMQDVMDRAAERGAPGIRLLQSGYHNRSFSLYASMGFVFRETVACVQGEAILREIPGHP-----VREATDADLHACNELCRQVHGVDRGGEVADALKQGTAR-----VVER--EGRVTGYATDLAFFAHAVAETTPDLQALIASAPAFGGPGIL-VPASNSL-----LLRWCLASGLGVVQLMSLMSVGLYNE--PEGAYL--PSI 283
BLAST of mRNA_H-paniculata_contig4644.11590.1 vs. uniprot
Match: UPI001BE851C1 (GNAT family N-acetyltransferase n=1 Tax=Streptomyces sp. ISL-10 TaxID=2819172 RepID=UPI001BE851C1) HSP 1 Score: 60.8 bits (146), Expect = 5.090e-6 Identity = 71/271 (26.20%), Postives = 111/271 (40.96%), Query Frame = 2
Query: 698 IAAIAIKGIATSRDGFALLDGEDGRMVGVSYVDVNAPGPNKVAELGPVCSLSP-----GAGRKTFEAACQHAEKLGFNVLVLQQVAANNRSFSLYAKVGFEAKHT--CHYFGGFLSADSNDADSGVSCTISEMTEKDVEECGALFTAAYGYDCWDRRPSIVHQMAGEQPFPILVARGADGEVVGYSTGFYLDGHQVTQSEDAFKALFRESSRIHKENHLPTPKFHNFMEYPSLVSWALAEKLILLRTTVVMVKGPYNHTWPQNGYVITPSI 1489
++ I+G T + ++ DGR+VG +++D + V +GPV ++ P G GR+ A + + L Q A +NRSFSLYA +GF + T C L A + E T+ D+ C L +G D R V +Q +V +G V GY+T H V ++ +AL + L P ++ L+ W LA L +++ +M G YN P Y+ PSI
Sbjct: 42 VSVALIEGALTHPGFYGVVAELDGRIVGSNFLDERS----SVVGVGPV-TIDPAVQNRGVGRRLMRDVMDRAVERRVPGIRLLQSAYHNRSFSLYASLGFAFRDTMACMQGPAILRVVPGHA-------VREATDADLAACNDLCRRVHGVD----RGGEVADAVDKQGTARVVEH--EGRVTGYATDLAYFAHAVAETTTDLQALIASAPAFGGPGIL-VPASNSL-----LLQWGLANGLKVVQLMSLMTIGLYNE--PAGAYL--PSI 284 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4644.11590.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig4644.11590.1 >prot_H-paniculata_contig4644.11590.1 ID=prot_H-paniculata_contig4644.11590.1|Name=mRNA_H-paniculata_contig4644.11590.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=333bp MNMSALSTKTSGDNMKLIYLDPKTITAAQISEIIDLVSKAFVDFNKSLTTback to top mRNA from alignment at H-paniculata_contig4644:149..13400- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig4644.11590.1 ID=mRNA_H-paniculata_contig4644.11590.1|Name=mRNA_H-paniculata_contig4644.11590.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=13252bp|location=Sequence derived from alignment at H-paniculata_contig4644:149..13400- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig4644:149..13400- >mRNA_H-paniculata_contig4644.11590.1 ID=mRNA_H-paniculata_contig4644.11590.1|Name=mRNA_H-paniculata_contig4644.11590.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1998bp|location=Sequence derived from alignment at H-paniculata_contig4644:149..13400- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |