prot_H-paniculata_contig4640.11586.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4640.11586.1
Unique Nameprot_H-paniculata_contig4640.11586.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length211
Homology
BLAST of mRNA_H-paniculata_contig4640.11586.1 vs. uniprot
Match: D8LBL0_ECTSI (RF_PROK_I domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBL0_ECTSI)

HSP 1 Score: 275 bits (702), Expect = 6.510e-89
Identity = 141/208 (67.79%), Postives = 168/208 (80.77%), Query Frame = 0
Query:    1 RREEIVENITKGLVPARDMRKLSKELGRLEIVLEAHAALAIKEEEAKDLEEIMRLSCSGGAEADGEMYTVAKEEHGECVRDLARLRLKLENLLVPRDETDSKNALLEVRSGSGGDEAAEFARSLFDMYRRFAALKGWAFEELHSSETDLGGYREAAAAIRGEDVYGALKFENGVHRVQRVPLNSTRLHTSAASVVVMMEAEDVDVTLD 208
            R EEIVE++TKG VP R+M  + KELGRLE VL+  A +  K  E +DLEE+M+ + +GGAEAD EM+ +AKEEH +C   L +LRL L +LL+PRDE DSKNALLEVRSGSGGDEAA FA+ LF+MYRRFA LKGW FE +  S  D GGYREA+A+IRGEDVYG+LKFENGVHRVQRVP NS RLHTSAASVVVMMEAE++D+ L+
Sbjct:   11 RHEEIVESMTKGEVPVREMGSVGKELGRLEAVLDLQAKVEEKAAEIQDLEEVMQATNAGGAEADREMHGIAKEEHADCTAALEKLRLDLTSLLLPRDEGDSKNALLEVRSGSGGDEAAAFAKELFEMYRRFAELKGWKFEGMTCSSIDAGGYREASASIRGEDVYGSLKFENGVHRVQRVPSNSPRLHTSAASVVVMMEAEEMDLKLE 218          
BLAST of mRNA_H-paniculata_contig4640.11586.1 vs. uniprot
Match: G8AT31_9PROT (Peptide chain release factor 1 n=29 Tax=Azospirillaceae TaxID=2829815 RepID=G8AT31_9PROT)

HSP 1 Score: 181 bits (460), Expect = 1.470e-52
Identity = 100/212 (47.17%), Postives = 137/212 (64.62%), Query Frame = 0
Query:    1 RREEIVENITKGLVPARDMRKLSKELGRLEIVLEAHAALAIKEEEAKDLEEIMRLSCSGGAEADGEMYTVAKEEHGECVRDLARLRLKLENLLVPRDETDSKNALLEVRSGSGGDEAAEFARSLFDMYRRFAALKGWAFEELHSSETDLGGYREAAAAIRGEDVYGALKFENGVHRVQRVPLNST--RLHTSAASVVVMMEAEDVDVTLDPR 210
            R +E+ + +  G V   D  +LSKE   L  V EA A L   + EA DL  ++          D +M  +A+EE G+  R +  L  +++  L+P+DE D KNA+LEVR+G+GGDEAA FA  LF+MYRR+A L+GW FE +  SET +GGY+EA A I G +V+  LKFE+GVHRVQRVP   T  R+HTSAA+V V+ EAE+VD+ +D +
Sbjct:   13 RHDELRDAMAAGTVDPADFARLSKEYADLTPVAEAIAELKKAKAEAADLAGMI-----ADPAGDADMKALAEEEFGDLTRRIPALERRVQISLLPKDEADEKNAILEVRAGTGGDEAALFAAELFEMYRRYAGLQGWRFETMEVSETGIGGYKEAIANITGRNVFARLKFESGVHRVQRVPATETQGRIHTSAATVAVLPEAEEVDIHIDEK 219          
BLAST of mRNA_H-paniculata_contig4640.11586.1 vs. uniprot
Match: D3NQV0_AZOS1 (Peptide chain release factor 1 n=30 Tax=cellular organisms TaxID=131567 RepID=D3NQV0_AZOS1)

HSP 1 Score: 180 bits (456), Expect = 6.430e-52
Identity = 100/212 (47.17%), Postives = 137/212 (64.62%), Query Frame = 0
Query:    1 RREEIVENITKGLVPARDMRKLSKELGRLEIVLEAHAALAIKEEEAKDLEEIMRLSCSGGAEADGEMYTVAKEEHGECVRDLARLRLKLENLLVPRDETDSKNALLEVRSGSGGDEAAEFARSLFDMYRRFAALKGWAFEELHSSETDLGGYREAAAAIRGEDVYGALKFENGVHRVQRVPLNST--RLHTSAASVVVMMEAEDVDVTLDPR 210
            R +E+ + +  GL  + D  +LSKE   L  +  A A L     EA DL E++  +  G + AD EM ++A+EE     + +  L  K++  L+P+DE D KNA+LEVR+G+GGDEAA FA  LF+MYRR+A L GW FE +  SET +GGY+EA A I G  V+  LKFE+GVHRVQRVP      R+HTSAA+V V+ EAE+VD+ +D +
Sbjct:   13 RYDELRDTLAAGLAESGDFARLSKEYADLTPIAAAIAELKRGRAEAADLAEMI-AAMMGDSGADPEMRSMAEEEFHLLTKRIPELERKVQISLLPKDEADEKNAILEVRAGTGGDEAALFAAELFEMYRRYAGLHGWRFEAMDVSETGIGGYKEATANITGRGVFAKLKFESGVHRVQRVPATEAQGRIHTSAATVAVLPEAEEVDIHIDEK 223          
BLAST of mRNA_H-paniculata_contig4640.11586.1 vs. uniprot
Match: A0A836C9B1_9STRA (RF_PROK_I domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9B1_9STRA)

HSP 1 Score: 177 bits (450), Expect = 2.760e-51
Identity = 89/193 (46.11%), Postives = 129/193 (66.84%), Query Frame = 0
Query:   17 RDMRKLSKELGRLEIVLEAHAALAIKEEEAKDLEEIMRLSCSGGAEADGEMYTVAKEEHGECVRDLARLRLKLENLLVPRDETDSKNALLEVRSGSGGDEAAEFARSLFDMYRRFAALKGWAFEELHSSETDLGGYREAAAAIRGEDVYGALKFENGVHRVQRVPLNSTRLHTSAASVVVMMEAEDVDVTLDP 209
            RD+ +LS  LG  E +  A +A+A       D +E+M     G  + D EMY +A  E    ++ +  L   +   L+P+DE D KN ++EVR+G+GGDE++ F   +F+MY+RFA+ +GW+++ LH ++TDLGG REAAA I G DV+  LKFE+GVHRVQRVP+N  R+HTSA SV V+ EA++VD+ +DP
Sbjct:    6 RDLNELSSVLGTAEQLETAQSAIA-------DCDEVMESCSKGQPDEDAEMYAMASAEKDSSLQAIPSLEDAIVRALLPKDEADEKNVIIEVRAGTGGDESSLFTWEVFEMYQRFASTQGWSWQLLHLTKTDLGGCREAAARIAGTDVFAQLKFESGVHRVQRVPVNDVRVHTSAMSVAVLPEADEVDIQIDP 191          
BLAST of mRNA_H-paniculata_contig4640.11586.1 vs. uniprot
Match: A0A2S2CTT8_9PROT (Peptide chain release factor 1 n=1 Tax=Azospirillum thermophilum TaxID=2202148 RepID=A0A2S2CTT8_9PROT)

HSP 1 Score: 176 bits (446), Expect = 1.810e-50
Identity = 97/212 (45.75%), Postives = 135/212 (63.68%), Query Frame = 0
Query:    1 RREEIVENITKGLVPARDMRKLSKELGRLEIVLEAHAALAIKEEEAKDLEEIMRLSCSGGAEADGEMYTVAKEEHGECVRDLARLRLKLENLLVPRDETDSKNALLEVRSGSGGDEAAEFARSLFDMYRRFAALKGWAFEELHSSETDLGGYREAAAAIRGEDVYGALKFENGVHRVQRVPLNST--RLHTSAASVVVMMEAEDVDVTLDPR 210
            R +E+ + +  GL  + +  +LSKE   L  V EA A L     E++DL ++     +     D EM  +A+EE     R +  L  +++  L+P+DE D KNA+LEVR+G+GG+EAA FA  LFDMYRR+A L+GW FE +  SET +GGY+EA A I G  V+  LKFE+GVHRVQRVP      R+HTSAA+V V+ EAE+VD+ +D +
Sbjct:   13 RHDELRDALAAGLADSGEFARLSKEYADLTPVAEAIAELKRARTESEDLAQM-----AADPAGDAEMRALAEEELQALTRRIPELERQVQIALLPKDEADEKNAILEVRAGTGGEEAALFAAELFDMYRRYAGLRGWRFETMDISETGIGGYKEATANITGRGVFARLKFESGVHRVQRVPATEAQGRIHTSAATVAVLPEAEEVDIHIDEK 219          
BLAST of mRNA_H-paniculata_contig4640.11586.1 vs. uniprot
Match: A0A537S900_9PROT (Peptide chain release factor 1 (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537S900_9PROT)

HSP 1 Score: 173 bits (439), Expect = 2.260e-50
Identity = 98/212 (46.23%), Postives = 136/212 (64.15%), Query Frame = 0
Query:    1 RREEIVENITKGLVPARDMRKLSKELGRLEIVLEAHAALAIKEEEAKDLEEIMRLSCSGGAEADGEMYTVAKEEHGECVRDLARLRLKLENLLVPRDETDSKNALLEVRSGSGGDEAAEFARSLFDMYRRFAALKGWAFEELHSSETDLGGYREAAAAIRGEDVYGALKFENGVHRVQRVPLN--STRLHTSAASVVVMMEAEDVDVTLDPR 210
            RR E+  +++ G +   D  K SKE   L  ++E   AL   + E    EE+ +      A+AD E+  +A+EE     + L  L  ++   L+PRDE D +NA+LEVR+G+GG+EAA FA  LF MY+R+A LKGW FE L  S+T LGG +EAAA+I G +V+  LKFE+GVHRVQRVP    S R+HTSAA+V V+ EAE+VD+ +D +
Sbjct:   15 RRNELSHSLSGGALTGGDFVKFSKEYSELSPIVEGIEALRRAQSELAAAEEMAK------ADADPELKALAEEEMRSIKQRLPELEAQVRTALLPRDEDDERNAILEVRAGTGGEEAALFAAELFRMYQRYATLKGWHFELLDLSDTGLGGVKEAAASITGRNVFARLKFESGVHRVQRVPETEASGRIHTSAATVAVLPEAEEVDIQIDDK 220          
BLAST of mRNA_H-paniculata_contig4640.11586.1 vs. uniprot
Match: A0A3N1MFT4_9PROT (Peptide chain release factor 1 n=1 Tax=Stella humosa TaxID=94 RepID=A0A3N1MFT4_9PROT)

HSP 1 Score: 175 bits (444), Expect = 3.980e-50
Identity = 95/212 (44.81%), Postives = 141/212 (66.51%), Query Frame = 0
Query:    1 RREEIVENITKGLVPARDMRKLSKELGRLEIVLEAHAALAIKEEEAKDLEEIMRLSCSGGAEADGEMYTVAKEEHGECVRDLARLRLKLENLLVPRDETDSKNALLEVRSGSGGDEAAEFARSLFDMYRRFAALKGWAFEELHSSETDLGGYREAAAAIRGEDVYGALKFENGVHRVQRVPLNST--RLHTSAASVVVMMEAEDVDVTLDPR 210
            R  EI   + +    A D  ++SKE   L+ ++    AL   EEE +   E  +++   G++A  EM  +A+ E  +  R +A +R +++ +L+PRDE D++NA+LE+R+G+GGDEAA FA  LF MY+R+AAL+GW +E +  SET +GG+REA A I G+DV+  LKFE+GVHRVQRVP      R+HTSAA+V V+ EAE+VD+ +D +
Sbjct:   17 RHREISAILAEAKSGAADFARMSKEFAELDPLVGEVQALRRAEEERR---EAAQMAADTGSDA--EMRALAEAERDDLDRQVAAVRRRIQLMLIPRDEADARNAILEIRAGTGGDEAALFAADLFRMYQRYAALRGWRWESMDVSETGIGGFREAIANISGKDVFARLKFESGVHRVQRVPTTEAGGRIHTSAATVAVLPEAEEVDIQIDDK 223          
BLAST of mRNA_H-paniculata_contig4640.11586.1 vs. uniprot
Match: A0A512DW37_9PROT (Peptide chain release factor 1 n=6 Tax=Skermanella TaxID=204447 RepID=A0A512DW37_9PROT)

HSP 1 Score: 174 bits (442), Expect = 6.490e-50
Identity = 97/212 (45.75%), Postives = 135/212 (63.68%), Query Frame = 0
Query:    1 RREEIVENITKGLVPARDMRKLSKELGRLEIVLEAHAALAIKEEEAKDLEEIMRLSCSGGAEADGEMYTVAKEEHGECVRDLARLRLKLENLLVPRDETDSKNALLEVRSGSGGDEAAEFARSLFDMYRRFAALKGWAFEELHSSETDLGGYREAAAAIRGEDVYGALKFENGVHRVQRVPLNST--RLHTSAASVVVMMEAEDVDVTLDPR 210
            R +E+ + +  G V A    K+SKE   L  + EA A L    +E +DL+ ++         AD EM  +A+ E     R L  L   ++ LL+P+DE D KNA+LEVR+G+GG+EAA FA  LF MY+R+AAL+GW FE +  SET +GGY+EA A+I G  V+  LK+E+GVHRVQRVP      R+HTSAA+V V+ EAE+VD+ +D +
Sbjct:   13 RHDELRDALAGGQVEAHAFAKMSKEYSELTPIAEAIAELRKARDERRDLDAML---------ADPEMKDLAEAELEALDRRLPELERGIQILLLPKDEADEKNAILEVRAGTGGEEAALFAAELFQMYQRYAALRGWKFETMDVSETGIGGYKEATASITGRSVFARLKYESGVHRVQRVPATEAGGRIHTSAATVAVLPEAEEVDIQIDEK 215          
BLAST of mRNA_H-paniculata_contig4640.11586.1 vs. uniprot
Match: UPI0004296B1D (peptide chain release factor 1 n=1 Tax=Azospirillum halopraeferens TaxID=34010 RepID=UPI0004296B1D)

HSP 1 Score: 173 bits (438), Expect = 2.900e-49
Identity = 99/212 (46.70%), Postives = 131/212 (61.79%), Query Frame = 0
Query:    1 RREEIVENITKGLVPARDMRKLSKELGRLEIVLEAHAALAIKEEEAKDLEEIMRLSCSGGAEADGEMYTVAKEEHGECVRDLARLRLKLENLLVPRDETDSKNALLEVRSGSGGDEAAEFARSLFDMYRRFAALKGWAFEELHSSETDLGGYREAAAAIRGEDVYGALKFENGVHRVQRVPLNST--RLHTSAASVVVMMEAEDVDVTLDPR 210
            R +E+ + ++ G   + +  +LS+E   L  V EA  AL     E  DL      + +    AD EM  +A EE  E    L  L   ++  L+PRDE D KNA+LEVR+G+GG+EAA FA  LF+MYRR+A L GW FE +  SET LGGY+EA A I G +V+  LKFE+GVHRVQRVP      R+HTSAA+V V+ EAE+VDV +D +
Sbjct:   13 RHDELRDALSAGTADSGEFARLSREYAELTPVAEAIGALKKARAETADL-----AAMAADPAADAEMRALAAEELRELEGRLPALERTVQVALLPRDEADEKNAILEVRAGTGGEEAALFAAELFEMYRRYAGLHGWRFETMEVSETGLGGYKEAIANITGRNVFARLKFESGVHRVQRVPATEAQGRIHTSAATVAVLPEAEEVDVHIDDK 219          
BLAST of mRNA_H-paniculata_contig4640.11586.1 vs. uniprot
Match: A0A3S0HXB8_9PROT (Peptide chain release factor 1 n=5 Tax=Azospirillum TaxID=191 RepID=A0A3S0HXB8_9PROT)

HSP 1 Score: 172 bits (437), Expect = 3.990e-49
Identity = 93/212 (43.87%), Postives = 136/212 (64.15%), Query Frame = 0
Query:    1 RREEIVENITKGLVPARDMRKLSKELGRLEIVLEAHAALAIKEEEAKDLEEIMRLSCSGGAEADGEMYTVAKEEHGECVRDLARLRLKLENLLVPRDETDSKNALLEVRSGSGGDEAAEFARSLFDMYRRFAALKGWAFEELHSSETDLGGYREAAAAIRGEDVYGALKFENGVHRVQRVPLNST--RLHTSAASVVVMMEAEDVDVTLDPR 210
            R +E+ + +  GLV + +  +LSKE   L  + +A  AL   + EA DL +++        + D EM  +A+EE  +  + +     +++  L+P+DE D KNA+LEVR+G+GGDEA  FA  LF+MYRR+A L+GW FE +  SE+ +GGY+EA A I G  V+  LKFE+GVHRVQRVP      R+HTSAA+V V+ EAE+VD+ +D +
Sbjct:   13 RHDELRDALAAGLVDSGEFSRLSKEYADLTPIADAILALKKAKGEAADLAQMI-----ADPDGDAEMKALAEEEFRDLSKRIPEFERRVQLSLLPKDEADEKNAILEVRAGTGGDEAGLFAAELFEMYRRYAGLRGWRFEVMDVSESGVGGYKEATANITGRSVFARLKFESGVHRVQRVPATEAQGRIHTSAATVAVLPEAEEVDIHIDEK 219          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4640.11586.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBL0_ECTSI6.510e-8967.79RF_PROK_I domain-containing protein n=2 Tax=Ectoca... [more]
G8AT31_9PROT1.470e-5247.17Peptide chain release factor 1 n=29 Tax=Azospirill... [more]
D3NQV0_AZOS16.430e-5247.17Peptide chain release factor 1 n=30 Tax=cellular o... [more]
A0A836C9B1_9STRA2.760e-5146.11RF_PROK_I domain-containing protein n=1 Tax=Tribon... [more]
A0A2S2CTT8_9PROT1.810e-5045.75Peptide chain release factor 1 n=1 Tax=Azospirillu... [more]
A0A537S900_9PROT2.260e-5046.23Peptide chain release factor 1 (Fragment) n=1 Tax=... [more]
A0A3N1MFT4_9PROT3.980e-5044.81Peptide chain release factor 1 n=1 Tax=Stella humo... [more]
A0A512DW37_9PROT6.490e-5045.75Peptide chain release factor 1 n=6 Tax=Skermanella... [more]
UPI0004296B1D2.900e-4946.70peptide chain release factor 1 n=1 Tax=Azospirillu... [more]
A0A3S0HXB8_9PROT3.990e-4943.87Peptide chain release factor 1 n=5 Tax=Azospirillu... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 32..52
NoneNo IPR availableGENE3D3.30.70.1660coord: 100..208
e-value: 3.8E-38
score: 132.7
NoneNo IPR availablePANTHERPTHR43804:SF7PEPTIDE CHAIN RELEASE FACTOR 1, MITOCHONDRIAL-RELATEDcoord: 17..209
NoneNo IPR availablePANTHERPTHR43804FAMILY NOT NAMEDcoord: 17..209
NoneNo IPR availableSUPERFAMILY75620Release factorcoord: 18..209
IPR005139Peptide chain release factorSMARTSM00937PCRF_a_2coord: 59..171
e-value: 1.5E-33
score: 127.5
IPR005139Peptide chain release factorPFAMPF03462PCRFcoord: 16..194
e-value: 9.0E-52
score: 175.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4640contigH-paniculata_contig4640:11000..15327 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4640.11586.1mRNA_H-paniculata_contig4640.11586.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4640 11000..15327 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4640.11586.1 ID=prot_H-paniculata_contig4640.11586.1|Name=mRNA_H-paniculata_contig4640.11586.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=211bp
RREEIVENITKGLVPARDMRKLSKELGRLEIVLEAHAALAIKEEEAKDLE
EIMRLSCSGGAEADGEMYTVAKEEHGECVRDLARLRLKLENLLVPRDETD
SKNALLEVRSGSGGDEAAEFARSLFDMYRRFAALKGWAFEELHSSETDLG
GYREAAAAIRGEDVYGALKFENGVHRVQRVPLNSTRLHTSAASVVVMMEA
EDVDVTLDPR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005139PCRF