mRNA_H-paniculata_contig4640.11586.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig4640.11586.1
Unique NamemRNA_H-paniculata_contig4640.11586.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig4640.11586.1 vs. uniprot
Match: D8LBL0_ECTSI (RF_PROK_I domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBL0_ECTSI)

HSP 1 Score: 275 bits (702), Expect = 6.510e-89
Identity = 141/208 (67.79%), Postives = 168/208 (80.77%), Query Frame = 1 
Query:    1 RREEIVENITKGLVPARDMRKLSKELGRLEIVLEAHAALAIKEEEAKDLEEIMRLSCSGGAEADGEMYTVAKEEHGECVRDLARLRLKLENLLVPRDETDSKNALLEVRSGSGGDEAAEFARSLFDMYRRFAALKGWAFEELHSSETDLGGYREAAAAIRGEDVYGALKFENGVHRVQRVPLNSTRLHTSAASVVVMMEAEDVDVTLD 624
            R EEIVE++TKG VP R+M  + KELGRLE VL+  A +  K  E +DLEE+M+ + +GGAEAD EM+ +AKEEH +C   L +LRL L +LL+PRDE DSKNALLEVRSGSGGDEAA FA+ LF+MYRRFA LKGW FE +  S  D GGYREA+A+IRGEDVYG+LKFENGVHRVQRVP NS RLHTSAASVVVMMEAE++D+ L+
Sbjct:   11 RHEEIVESMTKGEVPVREMGSVGKELGRLEAVLDLQAKVEEKAAEIQDLEEVMQATNAGGAEADREMHGIAKEEHADCTAALEKLRLDLTSLLLPRDEGDSKNALLEVRSGSGGDEAAAFAKELFEMYRRFAELKGWKFEGMTCSSIDAGGYREASASIRGEDVYGSLKFENGVHRVQRVPSNSPRLHTSAASVVVMMEAEEMDLKLE 218
[Close]
BLAST of mRNA_H-paniculata_contig4640.11586.1 vs. uniprot
Match: G8AT31_9PROT (Peptide chain release factor 1 n=29 Tax=Azospirillaceae TaxID=2829815 RepID=G8AT31_9PROT)

HSP 1 Score: 181 bits (460), Expect = 1.470e-52
Identity = 100/212 (47.17%), Postives = 137/212 (64.62%), Query Frame = 1 
Query:    1 RREEIVENITKGLVPARDMRKLSKELGRLEIVLEAHAALAIKEEEAKDLEEIMRLSCSGGAEADGEMYTVAKEEHGECVRDLARLRLKLENLLVPRDETDSKNALLEVRSGSGGDEAAEFARSLFDMYRRFAALKGWAFEELHSSETDLGGYREAAAAIRGEDVYGALKFENGVHRVQRVPLNST--RLHTSAASVVVMMEAEDVDVTLDPR 630
            R +E+ + +  G V   D  +LSKE   L  V EA A L   + EA DL  ++          D +M  +A+EE G+  R +  L  +++  L+P+DE D KNA+LEVR+G+GGDEAA FA  LF+MYRR+A L+GW FE +  SET +GGY+EA A I G +V+  LKFE+GVHRVQRVP   T  R+HTSAA+V V+ EAE+VD+ +D +
Sbjct:   13 RHDELRDAMAAGTVDPADFARLSKEYADLTPVAEAIAELKKAKAEAADLAGMI-----ADPAGDADMKALAEEEFGDLTRRIPALERRVQISLLPKDEADEKNAILEVRAGTGGDEAALFAAELFEMYRRYAGLQGWRFETMEVSETGIGGYKEAIANITGRNVFARLKFESGVHRVQRVPATETQGRIHTSAATVAVLPEAEEVDIHIDEK 219
[Close]
BLAST of mRNA_H-paniculata_contig4640.11586.1 vs. uniprot
Match: D3NQV0_AZOS1 (Peptide chain release factor 1 n=30 Tax=cellular organisms TaxID=131567 RepID=D3NQV0_AZOS1)

HSP 1 Score: 180 bits (456), Expect = 6.430e-52
Identity = 100/212 (47.17%), Postives = 137/212 (64.62%), Query Frame = 1 
Query:    1 RREEIVENITKGLVPARDMRKLSKELGRLEIVLEAHAALAIKEEEAKDLEEIMRLSCSGGAEADGEMYTVAKEEHGECVRDLARLRLKLENLLVPRDETDSKNALLEVRSGSGGDEAAEFARSLFDMYRRFAALKGWAFEELHSSETDLGGYREAAAAIRGEDVYGALKFENGVHRVQRVPLNST--RLHTSAASVVVMMEAEDVDVTLDPR 630
            R +E+ + +  GL  + D  +LSKE   L  +  A A L     EA DL E++  +  G + AD EM ++A+EE     + +  L  K++  L+P+DE D KNA+LEVR+G+GGDEAA FA  LF+MYRR+A L GW FE +  SET +GGY+EA A I G  V+  LKFE+GVHRVQRVP      R+HTSAA+V V+ EAE+VD+ +D +
Sbjct:   13 RYDELRDTLAAGLAESGDFARLSKEYADLTPIAAAIAELKRGRAEAADLAEMI-AAMMGDSGADPEMRSMAEEEFHLLTKRIPELERKVQISLLPKDEADEKNAILEVRAGTGGDEAALFAAELFEMYRRYAGLHGWRFEAMDVSETGIGGYKEATANITGRGVFAKLKFESGVHRVQRVPATEAQGRIHTSAATVAVLPEAEEVDIHIDEK 223
[Close]
BLAST of mRNA_H-paniculata_contig4640.11586.1 vs. uniprot
Match: A0A836C9B1_9STRA (RF_PROK_I domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9B1_9STRA)

HSP 1 Score: 177 bits (450), Expect = 2.760e-51
Identity = 89/193 (46.11%), Postives = 129/193 (66.84%), Query Frame = 1 
Query:   49 RDMRKLSKELGRLEIVLEAHAALAIKEEEAKDLEEIMRLSCSGGAEADGEMYTVAKEEHGECVRDLARLRLKLENLLVPRDETDSKNALLEVRSGSGGDEAAEFARSLFDMYRRFAALKGWAFEELHSSETDLGGYREAAAAIRGEDVYGALKFENGVHRVQRVPLNSTRLHTSAASVVVMMEAEDVDVTLDP 627
            RD+ +LS  LG  E +  A +A+A       D +E+M     G  + D EMY +A  E    ++ +  L   +   L+P+DE D KN ++EVR+G+GGDE++ F   +F+MY+RFA+ +GW+++ LH ++TDLGG REAAA I G DV+  LKFE+GVHRVQRVP+N  R+HTSA SV V+ EA++VD+ +DP
Sbjct:    6 RDLNELSSVLGTAEQLETAQSAIA-------DCDEVMESCSKGQPDEDAEMYAMASAEKDSSLQAIPSLEDAIVRALLPKDEADEKNVIIEVRAGTGGDESSLFTWEVFEMYQRFASTQGWSWQLLHLTKTDLGGCREAAARIAGTDVFAQLKFESGVHRVQRVPVNDVRVHTSAMSVAVLPEADEVDIQIDP 191
[Close]
BLAST of mRNA_H-paniculata_contig4640.11586.1 vs. uniprot
Match: A0A2S2CTT8_9PROT (Peptide chain release factor 1 n=1 Tax=Azospirillum thermophilum TaxID=2202148 RepID=A0A2S2CTT8_9PROT)

HSP 1 Score: 176 bits (446), Expect = 1.810e-50
Identity = 97/212 (45.75%), Postives = 135/212 (63.68%), Query Frame = 1 
Query:    1 RREEIVENITKGLVPARDMRKLSKELGRLEIVLEAHAALAIKEEEAKDLEEIMRLSCSGGAEADGEMYTVAKEEHGECVRDLARLRLKLENLLVPRDETDSKNALLEVRSGSGGDEAAEFARSLFDMYRRFAALKGWAFEELHSSETDLGGYREAAAAIRGEDVYGALKFENGVHRVQRVPLNST--RLHTSAASVVVMMEAEDVDVTLDPR 630
            R +E+ + +  GL  + +  +LSKE   L  V EA A L     E++DL ++     +     D EM  +A+EE     R +  L  +++  L+P+DE D KNA+LEVR+G+GG+EAA FA  LFDMYRR+A L+GW FE +  SET +GGY+EA A I G  V+  LKFE+GVHRVQRVP      R+HTSAA+V V+ EAE+VD+ +D +
Sbjct:   13 RHDELRDALAAGLADSGEFARLSKEYADLTPVAEAIAELKRARTESEDLAQM-----AADPAGDAEMRALAEEELQALTRRIPELERQVQIALLPKDEADEKNAILEVRAGTGGEEAALFAAELFDMYRRYAGLRGWRFETMDISETGIGGYKEATANITGRGVFARLKFESGVHRVQRVPATEAQGRIHTSAATVAVLPEAEEVDIHIDEK 219
[Close]
BLAST of mRNA_H-paniculata_contig4640.11586.1 vs. uniprot
Match: A0A537S900_9PROT (Peptide chain release factor 1 (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537S900_9PROT)

HSP 1 Score: 173 bits (439), Expect = 2.260e-50
Identity = 98/212 (46.23%), Postives = 136/212 (64.15%), Query Frame = 1 
Query:    1 RREEIVENITKGLVPARDMRKLSKELGRLEIVLEAHAALAIKEEEAKDLEEIMRLSCSGGAEADGEMYTVAKEEHGECVRDLARLRLKLENLLVPRDETDSKNALLEVRSGSGGDEAAEFARSLFDMYRRFAALKGWAFEELHSSETDLGGYREAAAAIRGEDVYGALKFENGVHRVQRVPLN--STRLHTSAASVVVMMEAEDVDVTLDPR 630
            RR E+  +++ G +   D  K SKE   L  ++E   AL   + E    EE+ +      A+AD E+  +A+EE     + L  L  ++   L+PRDE D +NA+LEVR+G+GG+EAA FA  LF MY+R+A LKGW FE L  S+T LGG +EAAA+I G +V+  LKFE+GVHRVQRVP    S R+HTSAA+V V+ EAE+VD+ +D +
Sbjct:   15 RRNELSHSLSGGALTGGDFVKFSKEYSELSPIVEGIEALRRAQSELAAAEEMAK------ADADPELKALAEEEMRSIKQRLPELEAQVRTALLPRDEDDERNAILEVRAGTGGEEAALFAAELFRMYQRYATLKGWHFELLDLSDTGLGGVKEAAASITGRNVFARLKFESGVHRVQRVPETEASGRIHTSAATVAVLPEAEEVDIQIDDK 220
[Close]
BLAST of mRNA_H-paniculata_contig4640.11586.1 vs. uniprot
Match: A0A3N1MFT4_9PROT (Peptide chain release factor 1 n=1 Tax=Stella humosa TaxID=94 RepID=A0A3N1MFT4_9PROT)

HSP 1 Score: 175 bits (444), Expect = 3.980e-50
Identity = 95/212 (44.81%), Postives = 141/212 (66.51%), Query Frame = 1 
Query:    1 RREEIVENITKGLVPARDMRKLSKELGRLEIVLEAHAALAIKEEEAKDLEEIMRLSCSGGAEADGEMYTVAKEEHGECVRDLARLRLKLENLLVPRDETDSKNALLEVRSGSGGDEAAEFARSLFDMYRRFAALKGWAFEELHSSETDLGGYREAAAAIRGEDVYGALKFENGVHRVQRVPLNST--RLHTSAASVVVMMEAEDVDVTLDPR 630
            R  EI   + +    A D  ++SKE   L+ ++    AL   EEE +   E  +++   G++A  EM  +A+ E  +  R +A +R +++ +L+PRDE D++NA+LE+R+G+GGDEAA FA  LF MY+R+AAL+GW +E +  SET +GG+REA A I G+DV+  LKFE+GVHRVQRVP      R+HTSAA+V V+ EAE+VD+ +D +
Sbjct:   17 RHREISAILAEAKSGAADFARMSKEFAELDPLVGEVQALRRAEEERR---EAAQMAADTGSDA--EMRALAEAERDDLDRQVAAVRRRIQLMLIPRDEADARNAILEIRAGTGGDEAALFAADLFRMYQRYAALRGWRWESMDVSETGIGGFREAIANISGKDVFARLKFESGVHRVQRVPTTEAGGRIHTSAATVAVLPEAEEVDIQIDDK 223
[Close]
BLAST of mRNA_H-paniculata_contig4640.11586.1 vs. uniprot
Match: A0A512DW37_9PROT (Peptide chain release factor 1 n=6 Tax=Skermanella TaxID=204447 RepID=A0A512DW37_9PROT)

HSP 1 Score: 174 bits (442), Expect = 6.490e-50
Identity = 97/212 (45.75%), Postives = 135/212 (63.68%), Query Frame = 1 
Query:    1 RREEIVENITKGLVPARDMRKLSKELGRLEIVLEAHAALAIKEEEAKDLEEIMRLSCSGGAEADGEMYTVAKEEHGECVRDLARLRLKLENLLVPRDETDSKNALLEVRSGSGGDEAAEFARSLFDMYRRFAALKGWAFEELHSSETDLGGYREAAAAIRGEDVYGALKFENGVHRVQRVPLNST--RLHTSAASVVVMMEAEDVDVTLDPR 630
            R +E+ + +  G V A    K+SKE   L  + EA A L    +E +DL+ ++         AD EM  +A+ E     R L  L   ++ LL+P+DE D KNA+LEVR+G+GG+EAA FA  LF MY+R+AAL+GW FE +  SET +GGY+EA A+I G  V+  LK+E+GVHRVQRVP      R+HTSAA+V V+ EAE+VD+ +D +
Sbjct:   13 RHDELRDALAGGQVEAHAFAKMSKEYSELTPIAEAIAELRKARDERRDLDAML---------ADPEMKDLAEAELEALDRRLPELERGIQILLLPKDEADEKNAILEVRAGTGGEEAALFAAELFQMYQRYAALRGWKFETMDVSETGIGGYKEATASITGRSVFARLKYESGVHRVQRVPATEAGGRIHTSAATVAVLPEAEEVDIQIDEK 215
[Close]
BLAST of mRNA_H-paniculata_contig4640.11586.1 vs. uniprot
Match: UPI0004296B1D (peptide chain release factor 1 n=1 Tax=Azospirillum halopraeferens TaxID=34010 RepID=UPI0004296B1D)

HSP 1 Score: 173 bits (438), Expect = 2.900e-49
Identity = 99/212 (46.70%), Postives = 131/212 (61.79%), Query Frame = 1 
Query:    1 RREEIVENITKGLVPARDMRKLSKELGRLEIVLEAHAALAIKEEEAKDLEEIMRLSCSGGAEADGEMYTVAKEEHGECVRDLARLRLKLENLLVPRDETDSKNALLEVRSGSGGDEAAEFARSLFDMYRRFAALKGWAFEELHSSETDLGGYREAAAAIRGEDVYGALKFENGVHRVQRVPLNST--RLHTSAASVVVMMEAEDVDVTLDPR 630
            R +E+ + ++ G   + +  +LS+E   L  V EA  AL     E  DL      + +    AD EM  +A EE  E    L  L   ++  L+PRDE D KNA+LEVR+G+GG+EAA FA  LF+MYRR+A L GW FE +  SET LGGY+EA A I G +V+  LKFE+GVHRVQRVP      R+HTSAA+V V+ EAE+VDV +D +
Sbjct:   13 RHDELRDALSAGTADSGEFARLSREYAELTPVAEAIGALKKARAETADL-----AAMAADPAADAEMRALAAEELRELEGRLPALERTVQVALLPRDEADEKNAILEVRAGTGGEEAALFAAELFEMYRRYAGLHGWRFETMEVSETGLGGYKEAIANITGRNVFARLKFESGVHRVQRVPATEAQGRIHTSAATVAVLPEAEEVDVHIDDK 219
[Close]
BLAST of mRNA_H-paniculata_contig4640.11586.1 vs. uniprot
Match: A0A3S0HXB8_9PROT (Peptide chain release factor 1 n=5 Tax=Azospirillum TaxID=191 RepID=A0A3S0HXB8_9PROT)

HSP 1 Score: 172 bits (437), Expect = 3.990e-49
Identity = 93/212 (43.87%), Postives = 136/212 (64.15%), Query Frame = 1 
Query:    1 RREEIVENITKGLVPARDMRKLSKELGRLEIVLEAHAALAIKEEEAKDLEEIMRLSCSGGAEADGEMYTVAKEEHGECVRDLARLRLKLENLLVPRDETDSKNALLEVRSGSGGDEAAEFARSLFDMYRRFAALKGWAFEELHSSETDLGGYREAAAAIRGEDVYGALKFENGVHRVQRVPLNST--RLHTSAASVVVMMEAEDVDVTLDPR 630
            R +E+ + +  GLV + +  +LSKE   L  + +A  AL   + EA DL +++        + D EM  +A+EE  +  + +     +++  L+P+DE D KNA+LEVR+G+GGDEA  FA  LF+MYRR+A L+GW FE +  SE+ +GGY+EA A I G  V+  LKFE+GVHRVQRVP      R+HTSAA+V V+ EAE+VD+ +D +
Sbjct:   13 RHDELRDALAAGLVDSGEFSRLSKEYADLTPIADAILALKKAKGEAADLAQMI-----ADPDGDAEMKALAEEEFRDLSKRIPEFERRVQLSLLPKDEADEKNAILEVRAGTGGDEAGLFAAELFEMYRRYAGLRGWRFEVMDVSESGVGGYKEATANITGRSVFARLKFESGVHRVQRVPATEAQGRIHTSAATVAVLPEAEEVDIHIDEK 219
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4640.11586.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LBL0_ECTSI6.510e-8967.79RF_PROK_I domain-containing protein n=2 Tax=Ectoca... [more]
G8AT31_9PROT1.470e-5247.17Peptide chain release factor 1 n=29 Tax=Azospirill... [more]
D3NQV0_AZOS16.430e-5247.17Peptide chain release factor 1 n=30 Tax=cellular o... [more]
A0A836C9B1_9STRA2.760e-5146.11RF_PROK_I domain-containing protein n=1 Tax=Tribon... [more]
A0A2S2CTT8_9PROT1.810e-5045.75Peptide chain release factor 1 n=1 Tax=Azospirillu... [more]
A0A537S900_9PROT2.260e-5046.23Peptide chain release factor 1 (Fragment) n=1 Tax=... [more]
A0A3N1MFT4_9PROT3.980e-5044.81Peptide chain release factor 1 n=1 Tax=Stella humo... [more]
A0A512DW37_9PROT6.490e-5045.75Peptide chain release factor 1 n=6 Tax=Skermanella... [more]
UPI0004296B1D2.900e-4946.70peptide chain release factor 1 n=1 Tax=Azospirillu... [more]
A0A3S0HXB8_9PROT3.990e-4943.87Peptide chain release factor 1 n=5 Tax=Azospirillu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4640contigH-paniculata_contig4640:11000..15327 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score275.0
Seed ortholog evalue2.9e-71
Seed eggNOG ortholog2880.D8LBL0
KEGG rclassRC00010
KEGG koko:K02433,ko:K02835
KEGG ReactionR03905,R04212
KEGG Pathwayko00970,ko01100,map00970,map01100
Hectar predicted targeting categoryother localisation
EggNOG free text desc.translation release factor activity
EggNOG OGsCOG0216@1,KOG2726@2759
Ec32 ortholog descriptionPeptide chain release factor
Ec32 orthologEc-27_003560.1
EC6.3.5.6,6.3.5.7
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03012,ko03029
Exons5
Model size633
Cds size633
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4640.11586.1prot_H-paniculata_contig4640.11586.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig4640 11000..15327 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930385.6072311-CDS-H-paniculata_contig4640:10999..111521622930385.6072311-CDS-H-paniculata_contig4640:10999..11152Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4640 11000..11152 +
1691481267.9123554-CDS-H-paniculata_contig4640:10999..111521691481267.9123554-CDS-H-paniculata_contig4640:10999..11152Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4640 11000..11152 +
1622930385.6246674-CDS-H-paniculata_contig4640:12192..123261622930385.6246674-CDS-H-paniculata_contig4640:12192..12326Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4640 12193..12326 +
1691481267.9269578-CDS-H-paniculata_contig4640:12192..123261691481267.9269578-CDS-H-paniculata_contig4640:12192..12326Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4640 12193..12326 +
1622930385.6394293-CDS-H-paniculata_contig4640:12948..131091622930385.6394293-CDS-H-paniculata_contig4640:12948..13109Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4640 12949..13109 +
1691481267.9348574-CDS-H-paniculata_contig4640:12948..131091691481267.9348574-CDS-H-paniculata_contig4640:12948..13109Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4640 12949..13109 +
1622930385.657219-CDS-H-paniculata_contig4640:14028..141081622930385.657219-CDS-H-paniculata_contig4640:14028..14108Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4640 14029..14108 +
1691481267.9436848-CDS-H-paniculata_contig4640:14028..141081691481267.9436848-CDS-H-paniculata_contig4640:14028..14108Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4640 14029..14108 +
1622930385.6758955-CDS-H-paniculata_contig4640:15222..153271622930385.6758955-CDS-H-paniculata_contig4640:15222..15327Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4640 15223..15327 +
1691481267.9522681-CDS-H-paniculata_contig4640:15222..153271691481267.9522681-CDS-H-paniculata_contig4640:15222..15327Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig4640 15223..15327 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig4640.11586.1

>prot_H-paniculata_contig4640.11586.1 ID=prot_H-paniculata_contig4640.11586.1|Name=mRNA_H-paniculata_contig4640.11586.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=211bp
RREEIVENITKGLVPARDMRKLSKELGRLEIVLEAHAALAIKEEEAKDLE
EIMRLSCSGGAEADGEMYTVAKEEHGECVRDLARLRLKLENLLVPRDETD
SKNALLEVRSGSGGDEAAEFARSLFDMYRRFAALKGWAFEELHSSETDLG
GYREAAAAIRGEDVYGALKFENGVHRVQRVPLNSTRLHTSAASVVVMMEA
EDVDVTLDPR*
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mRNA from alignment at H-paniculata_contig4640:11000..15327+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig4640.11586.1 ID=mRNA_H-paniculata_contig4640.11586.1|Name=mRNA_H-paniculata_contig4640.11586.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4328bp|location=Sequence derived from alignment at H-paniculata_contig4640:11000..15327+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CGCCGAGAGGAGATCGTCGAGAACATCACAAAGGGCTTGGTGCCTGCAAG
GGATATGAGAAAGCTGAGCAAGGAGCTCGGTCGTCTTGAGATCGTGCTGG
AGGCGCACGCTGCTTTAGCGATCAAAGAAGAGGAAGCAAAGGATCTCGAA
GAGGTGTGCGATGTCGTCAACAAACGTCGCCGCCAACGTTGCAAGAGAGA
CAGCGACTAGAAAGAGGGGCTTGCTGCTTCAACCAATTTCACAATGTCAT
TAGTTGCTCAATTGCCAGCTGTGAAATGCAGTATTGATCTCGTCATCGTT
TTTCTTCCTTACTCAACCATTATCTTGTGCTAAGTGAATACCTTTGAGCA
ACCTCATCGTGATGTAAACTTGGACCGGAGCCATAGCCTTGAAAAGACTG
ATTTACTAAAAGGATTCCGGTTATACCAAAATCAATAGAGACCAGAATTC
TCCGCCGCGGGTGGGACAGCTCGGAATAGTGATAGCACAGGATTCGATTT
ACTGAGTAGGGAGGACAGCCACGATTATGCAGTCTCAGCTGTTCCGTCTG
GTGGGTTCCTCAAGCGGCGCGAAAGCAAGAGAGTAGGACAGCAGAAAGCG
ATCAATTGCTTTCTCCCTCGCATGGAGAGAATCTGCCGTCCTTGAAGCTA
GGTATTGGGGCTATTCTTCACAGAAACGCGTGTAGTGTTTGCCGTGAAAC
CCGTTGTCGTATGGTGCGGTTAGGAATGACTGGATACAAGAACCAACAAA
TTGGCAGTTCTTGTTATCTTCAAATCAGTCAAGTATGGCGAATATCCCAT
GTTCAGTTCCGTCAATAGGGCTATGCAGCTGTGCATGTTTTACGGGGTGC
AGTCCACGTGTTGCGTGTAGACTTTTCGAGTCTTCAAGCGATGAAAGAAA
AATACGAACCGCAGAGTTTTTGCGTCGACCTGAATGATGCGTTAGTTTTT
GCGAGAGAGTCCAAAACTGGGGCGCAGCTGTGGAGAGGCGCGTATTCACA
CTGTTCCCGCAAATTCTTGGATATTGAGGGTGTGGGGTAATGTTTCGGTT
CGATTCTTCCACGAGAACAGGCGTGGCGTGATTCGCGACTGAGTATATAG
TACATGGTATATCGGTAGCTTTACTGTATTTGTCGCTGTTGCACGTTTTT
TGCGACGAATGTGCTGTGCTTGATAATGCGTGCTTTGCCGTAGATAATGC
GCCTCAGCTGCTCTGGCGGCGCCGAGGCAGACGGAGAGATGTATACCGTG
GCCAAAGAGGAGCACGGAGAGTGTGTGCGGGACTTGGCGAGGCTCCGACT
CAAACTCGAAAATCTTCTTGTTCCAAGGTACGTTGTTTTACGCACGTGTG
TATTTCTATGAATGAAAGATCGTCAGCAAGTTTTACAGTGGTAATTTGAC
GAAAATCGCTGCACAGTGTTCCTCCAGAGCTGAGCGGATTGTTCACCATT
CGTAGCATGGTTCTTGCCCCTCCTTTTCGGCCGAAACCATTCATGTCATC
TTTCTCGTCTGATGGATAACATCAAAAACGAGACAGGTTCGGTTGCCACG
GGTTTGGTGGCGGCATGTCATGGAGTATAGCGCACCACGTGATGGAAGCA
GGGGGTGAACTATCACGAAACAAATAATTTGAATGCCCACTAAAGAGTCG
ACGTAAAATTGTATTTGATACCGACCTGTGATTACCTATCAACATGCAGA
GACACTGGCTGGCTATACTCTCTGTCTCTCTCTCTCTGTCTCTCTCACTC
TTTGCGATCGTTGTTTTCCCGTCCAGTTGGTTAGAGTACAAAATGCATAA
CAATTGACTTATTTATGCCGTCCTGTCACTCGTTCATTCTTCTTGCTCTG
ATTCTGATGATGCGGGGCACTGCGAAATCAAATTCAACACAACAAACCAA
CAACAACAACAACAACAACAACAACAACAACAACAACAACAATTGCAAGG
GACGAAACAGACTCCAAAAACGCCCTTCTGGAGGTGCGGAGTGGCAGTGG
TGGAGATGAGGCGGCGGAATTCGCGAGGAGTTTGTTCGACATGTACCGGC
GTTTCGCTGCTCTTAAGGGCTGGGCTTTCGAAGAGCTTCATTCCAGCGAG
ACTGACTTAGGTACTTACTCGTTAGGGCTACACCTATAGGGTAACAGGGG
CATATAAGTGGATTTTTTCCCCTGTAACTCAGGACATCGTTCGCTTACTT
GCTAAGGTTAGGTTTGCCTCTTTGGCTGTGTTTATAACTAGGATATCCCG
CCTTTGCACTCGACCTGACACAGGGGCAATAGTAAAACAGGGGCGGCTGC
AAACTTGACACGCCCCGAACAACTAAATAGTTGCTTGAATATCACTTTTT
CTTAGATTTTCCCGTATTCTCAAAGTTGACAGCTAGCAGAAATGATAAGT
TTTTTAAAGTCATGTTTTGGGGTTATTTCTCTCAGTGCAACCAACGCCTG
TATGGTCGGAAACCTTATTGTTCGAAAGCTCTCGTCACTACTGTTCTACC
GAATTTGTTGTAATTTGCTATTTTTAGTTCTTTTTTGCTGCGAAGGACGA
TAAAATTAGGATTTTCGCGTGTTCGCGCTTTGGCGCCACCAACAACGCAG
CAAAATGTACGAGAGTATTCAAGGAGCCTGCGATGTCAGCCTTGGAGTGA
TACCCAGCACGGATGCTTTTCCCTAATGGTCCACAATCCTTAAAAAAAGC
AATTGACGGTTTTGACGTTTGGTTATTATCCATTGTATACTTCCCTGCAC
TTCTGTATGACTATGTTCGTGCGGTGGAGCCGCTTGTACGCCCTAAAAGT
ATTAATCGCGCACGAACACGTTCGGAGGACCGATACTGCAAGTGCTAGCC
GGGAGCAGCCTTGTAAAAAATGTAAAGACGCAATAGCGTAAAATAGTCTT
TTGAGTCTCAATCAATCTTTAATAGATATGGTCACAGAAGCTTTATGTTC
GCCCTGAAACTTCCACCCCATTTAAGACGCATTTGTTTGTGGATACCCAC
CCTCTTTCCTATCCGCTTGCTCGTTGTAGGTGGATACAGAGAAGCCGCCG
CGGCTATTCGTGGGGAAGATGTGTACGGAGCGCTCAAGTTCGAGAACGGG
GTTCACAGGGTAAGAGAGAGAGAGACAAACAGACAGAGAGAGACAGAGAG
AACGCGAGCGATTCGACTTTTTGTAAACGCAACCTCCACACACATGTTCG
GGTCTTGATTACAAAACGTGATCGGTTTATTACTGCTAATGGGTCGTGTT
TTTTACTCGAGTTTTGAAAATTGAATGTGCAAATATACACTCGGCCTAAT
CGTGGTCATGAACGAGTTTTGGGGTAACCGTGGGTGGTTCGCCAACCTAC
CCTACTGTGTGCTCGGTAACTGAAAAGCTTTTAGCTGCGTTGTTTCGCTT
GAGTTTTTATGCCCGGGAAACTTCGCGTGGTGGTTTCCCTTGAAATTGTG
CAATACCAGCAGACGACGTTTTGACGGGGTGGCCTGGGAGGCGTCTCTGT
TTCAGGGTGTTATACATGTCATGGATGTTGCCGTCTATGTGATGAGCGCT
ACCGTCTACCTGAGGTCGAGCCCTTGATGAATGTAATCGAGGATTGCGCT
GCTTTTCTCAGCGTCTGAAATCTTGTTGGGGTTGAAGTCAACTTGGCTGA
TTTTGTGGTGGCAACGGGCTAAATTAATTGCGTTTCACGTTTGGATTTAG
TGTGTGTGTATGTGCGGCGATTCCGCTACGCCGCTCAGATGTGTACGAAA
AAGATGCACACTCGGCGTGTAAACACAGGAGCACATACATATATACATAT
ATTTATATATATATGCCCCTGTGTTTACACGGACATCGACACATAACCGG
GGAACACGATTTACGTTAGCTGAGGCGCGGCCCTCCAACATCCTCGTTTT
GACGGAAACCCTGTGGCTGACGACATGTGTTTTTTGCTTCTGGTTTGCAT
TGCTCTGCTGCACCCTGCTGATATATTTCCTATTTTGCATTGCTCATGCT
CTACTGTGCTATGCTGTGCTGTGCAATAATCTTGAAGCGGGCTAGCTGCA
GACTCAAGAACAAGTAGGCTGTACACGCCGGTCAATCAAGCCAGCCCTCG
AACACAAACACAGATCGCCCGCCACACTGTACTTGGTTCCCGTACATTCA
CTGCCCACCACCCTACCCACGCCCGGCCCCACCCGGGTCTGCGCGCTGTC
CTCTATGCCGATCGATCTGGCAGGTTCAGCGCGTGCCTTTAAACAGCACG
AGACTTCATACGAGCGCGGCATCGGTGGTGGTCATGATGGAAGCAGAAGA
TGTTGATGTCACCTTAGATCCACGGTGA
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Coding sequence (CDS) from alignment at H-paniculata_contig4640:11000..15327+

>mRNA_H-paniculata_contig4640.11586.1 ID=mRNA_H-paniculata_contig4640.11586.1|Name=mRNA_H-paniculata_contig4640.11586.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1266bp|location=Sequence derived from alignment at H-paniculata_contig4640:11000..15327+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CGCCGAGAGGAGATCGTCGAGAACATCACAAAGGGCTTGGTGCCTGCAAG
GGATATGAGAAAGCTGAGCAAGGAGCTCGGTCGTCTTGAGATCGTGCTGG
AGGCGCACGCTGCTTTAGCGATCAAAGAAGAGGAAGCAAAGGATCTCGAA
GAGCGCCGAGAGGAGATCGTCGAGAACATCACAAAGGGCTTGGTGCCTGC
AAGGGATATGAGAAAGCTGAGCAAGGAGCTCGGTCGTCTTGAGATCGTGC
TGGAGGCGCACGCTGCTTTAGCGATCAAAGAAGAGGAAGCAAAGGATCTC
GAAGAGATAATGCGCCTCAGCTGCTCTGGCGGCGCCGAGGCAGACGGAGA
GATGTATACCGTGGCCAAAGAGGAGCACGGAGAGTGTGTGCGGGACTTGG
CGAGGCTCCGACTCAAACTCGAAAATCTTCTTGTTCCAAGATAATGCGCC
TCAGCTGCTCTGGCGGCGCCGAGGCAGACGGAGAGATGTATACCGTGGCC
AAAGAGGAGCACGGAGAGTGTGTGCGGGACTTGGCGAGGCTCCGACTCAA
ACTCGAAAATCTTCTTGTTCCAAGGGACGAAACAGACTCCAAAAACGCCC
TTCTGGAGGTGCGGAGTGGCAGTGGTGGAGATGAGGCGGCGGAATTCGCG
AGGAGTTTGTTCGACATGTACCGGCGTTTCGCTGCTCTTAAGGGCTGGGC
TTTCGAAGAGCTTCATTCCAGCGAGACTGACTTAGGGACGAAACAGACTC
CAAAAACGCCCTTCTGGAGGTGCGGAGTGGCAGTGGTGGAGATGAGGCGG
CGGAATTCGCGAGGAGTTTGTTCGACATGTACCGGCGTTTCGCTGCTCTT
AAGGGCTGGGCTTTCGAAGAGCTTCATTCCAGCGAGACTGACTTAGGTGG
ATACAGAGAAGCCGCCGCGGCTATTCGTGGGGAAGATGTGTACGGAGCGC
TCAAGTTCGAGAACGGGGTTCACAGGGTGGATACAGAGAAGCCGCCGCGG
CTATTCGTGGGGAAGATGTGTACGGAGCGCTCAAGTTCGAGAACGGGGTT
CACAGGGTTCAGCGCGTGCCTTTAAACAGCACGAGACTTCATACGAGCGC
GGCATCGGTGGTGGTCATGATGGAAGCAGAAGATGTTGATGTCACCTTAG
ATCCACGGTGAGTTCAGCGCGTGCCTTTAAACAGCACGAGACTTCATACG
AGCGCGGCATCGGTGGTGGTCATGATGGAAGCAGAAGATGTTGATGTCAC
CTTAGATCCACGGTGA
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