prot_H-paniculata_contig4639.11579.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig4639.11579.1
Unique Nameprot_H-paniculata_contig4639.11579.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length720
Homology
BLAST of mRNA_H-paniculata_contig4639.11579.1 vs. uniprot
Match: D7G1A2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1A2_ECTSI)

HSP 1 Score: 478 bits (1229), Expect = 5.570e-154
Identity = 406/896 (45.31%), Postives = 460/896 (51.34%), Query Frame = 0
Query:    2 KQIPPNLMTLFAHIMCRTTEGSNSRGSTAHTWIEVLQPPV------------------DGSNESQPF-PMSAQDWRKMEAFSEHLQSLVAARNAQRNANGNGRRTVAHNSACASAL--------------------NCSVVGVSGAASTSNHSAYANGK------IKGKGRPPQHTQPAATHLSSHIGSYPNGTATPAPPDVAMPRQHGPRVTPREPSRTGN--EPSAPTKVVGRVAAARRVNGVAEGAVASLAVARAGPGAFETPSHS--HHVAS----------------PGDVRSGGXXXXXXXXXXXXXXXXXHARGREHSPSRYPARLRSRRFPQLGGGGGETPELPPLREMGMGHGVEETDG-DNDPPNGARRLSPRNSHSSA--------------EQHYPNGWIGSAG------------------------DGLSPH----AEHGVPDDGADSYGMRPRGL-PK------PPGVLMNGGATAVTPGGAVTPQTSAVNVGVPPPVNFGGARPTSNAGSE--------AIGGPSSKPQ-APPRPRQVLQSGGGGRSGSRA-PVPRSSVGGRNYTDNHVKQLVLIETAVVASATQQDHATYNLPRQGRTLTLTNVFKFVALRGAGVMYGLANAKQVEAHTGRHSNFFDGKIDARIVAIIKKDINDEAITKSRKFSKILLSLIAEAGCTSPDCDWDHNTFTSENIARMQANMEAETGTSALHNVINPAAAFASS------------------------------SSPGLGAAAAGSAGGPGNGVP------------SKRRLDLGRDD--GQTPSPRLKKLKRNARARFA---------GSENTPVAAXXXXXXXXXXXXXXXXXXXXXXKEEDDMRAAEVLQGLKGIGGN 719
            +Q+PPNLMTLFAH+M R  EG +   + AH W EVL                       G+    P  PMSAQDWRK EAFS HLQSL+AAR+A   +NG+   +     A                          CS    SG A     S +  G+        G+ +  +   PAA   ++   +   GTA P         QH P  TP+E S  G   EPSAP K VGRVA +RRVNG AEGAVASLAV+RAGPGAFETP+HS  HH                   PG V S         XXXXXXXXX   RGREHSPSRYPARLRSRRFPQLGG                  G    DG +     G RRLSPR+S  ++               QH  +GW+ +AG                         G+  H       G      + YGMR R   PK      P  V  +G +++  PG A TPQ +   V  P P++F  A P   +           A G PS + + A PRPRQVLQ  GGGRSG RA P+PRSSVGGRNYTDNHVKQL LIE AVVASAT +D ATYNLPRQGRTLTLTNVFKF+ALRGAG MY LA  KQVEAHTGRHSNFFDGKIDARIV +IKKDI DEAITKSRKFSKILLSL+AE GCT PDCDWDH +FTSE IA +QA MEA TGTSAL    +PA   A+                               SSP  G+A AG                      SKRRLDLGRDD  GQTPSPRLKKLKR ARAR           G E+TP A                       KEEDDMRAAEVLQGLK I G+
Sbjct:   12 QQMPPNLMTLFAHVMSRANEGGSRGSAAAHGWDEVLNAAXXXXXXXXXXXXXXXXXXXSGTISPGPCCPMSAQDWRKAEAFSVHLQSLLAARDALCGSNGSSSSSSRGAGATTGXXXXXXXXXXXXYYGPQSGAEGRCSPAS-SGPADGREPSPFPGGRKDSTPHANGRAKGGRAKAPAAPSGAAATPNNAAGTAWP---------QHVPGATPKESSSRGGGEEPSAPIKAVGRVAVSRRVNGGAEGAVASLAVSRAGPGAFETPAHSTSHHXXXXXXXXXXXXXXXXXXXPGTVDS---------XXXXXXXXXNSLRGREHSPSRYPARLRSRRFPQLGGXXXXXXXXXXXXXXXRA-GDAGADGLEGHQSQGGRRLSPRHSPPASVGREHGRGIPSDARRQHNAHGWVVTAGAEKRAAGXXXXXXXXXXXXRGEEEGGVFTHDGGRGHEGGXGRAGEGYGMRTRAAAPKGSYELGPAAVASSGPSSSPLPG-ACTPQITTGAVVSPVPMDFRPAPPPIMSXXXXXXXXXXVAAGRPSPRAEVAAPRPRQVLQ--GGGRSGGRAAPLPRSSVGGRNYTDNHVKQLGLIEAAVVASATARDRATYNLPRQGRTLTLTNVFKFIALRGAGAMYRLAMDKQVEAHTGRHSNFFDGKIDARIVGVIKKDIGDEAITKSRKFSKILLSLVAE-GCTHPDCDWDHTSFTSEKIANLQARMEASTGTSALKFCADPAVFLAAXXXXXXXXXXXXXXXXXXXXXXXXXXSGSIPSSPLSGSAFAGXXXXXXXXXXXXXXXXXXXXXXSKRRLDLGRDDDGGQTPSPRLKKLKRAARARVTTAGSAAADGGVESTPTAEGNSKSPP---------------KEEDDMRAAEVLQGLKDIVGS 868          
BLAST of mRNA_H-paniculata_contig4639.11579.1 vs. uniprot
Match: A0A835YUT3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUT3_9STRA)

HSP 1 Score: 187 bits (476), Expect = 6.020e-48
Identity = 94/161 (58.39%), Postives = 118/161 (73.29%), Query Frame = 0
Query:  448 RSSVGGRNYTDNHVKQLVLIETAVVASATQQDHATYNLPRQGRTLTLTNVFKFVALRGAGVMYGLANAKQVEAHTGRHSNFFDGKIDARIVAIIKKDINDEAITKSRKFSKILLSLIAEAGCTSPDCDWDHNTFTSENIARMQANMEAETGTSALHNVINP 608
            R+SVGGRNYTD  ++QL LIE  VVA AT  DHA +NLPRQ RTL LTN+FK++ALRGA  ++ +A A+ +E  TGRHSNF+DGKID RIVA++K D++D A T SRKFSK+LLSL+AE GC  P CDW + TF S+NI R+Q           LHN++ P
Sbjct:  369 RTSVGGRNYTDEQLRQLQLIEAEVVARATPGDHAAFNLPRQARTLALTNMFKYIALRGAARLHAMAVARGLEGRTGRHSNFYDGKIDTRIVAVVKHDMDDAAATASRKFSKVLLSLLAE-GCGDPSCDWSYATFASDNINRLQG----------LHNILWP 518          
BLAST of mRNA_H-paniculata_contig4639.11579.1 vs. uniprot
Match: A0A835YSU2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSU2_9STRA)

HSP 1 Score: 109 bits (272), Expect = 1.810e-21
Identity = 51/92 (55.43%), Postives = 69/92 (75.00%), Query Frame = 0
Query:  467 IETAVVASATQQDHATYNLPRQGRTLTLTNVFKFVALRGAGVMYGLANAKQVEAHTGRHSNFFDGKIDARIVAIIKKDINDEAITKSRKFSK 558
            IE  V A AT  D A ++LPRQ RTL LTN+FK++ALRGA  M+ LA  + +    G+HSNF+DGKIDAR+VAI+++D+ D+  T++RKFSK
Sbjct:  313 IEARVAARATDADRAAFSLPRQARTLALTNMFKYIALRGAAQMHALAVLRGLHTCGGKHSNFYDGKIDARVVAIVRRDVGDDVATQTRKFSK 404          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig4639.11579.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G1A2_ECTSI5.570e-15445.31Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YUT3_9STRA6.020e-4858.39Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YSU2_9STRA1.810e-2155.43Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig4639contigH-paniculata_contig4639:8889..11520 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig4639.11579.1mRNA_H-paniculata_contig4639.11579.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig4639 8889..11520 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig4639.11579.1 ID=prot_H-paniculata_contig4639.11579.1|Name=mRNA_H-paniculata_contig4639.11579.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=720bp
MKQIPPNLMTLFAHIMCRTTEGSNSRGSTAHTWIEVLQPPVDGSNESQPF
PMSAQDWRKMEAFSEHLQSLVAARNAQRNANGNGRRTVAHNSACASALNC
SVVGVSGAASTSNHSAYANGKIKGKGRPPQHTQPAATHLSSHIGSYPNGT
ATPAPPDVAMPRQHGPRVTPREPSRTGNEPSAPTKVVGRVAAARRVNGVA
EGAVASLAVARAGPGAFETPSHSHHVASPGDVRSGGGAVAGGGGGGGGGG
GGGHARGREHSPSRYPARLRSRRFPQLGGGGGETPELPPLREMGMGHGVE
ETDGDNDPPNGARRLSPRNSHSSAEQHYPNGWIGSAGDGLSPHAEHGVPD
DGADSYGMRPRGLPKPPGVLMNGGATAVTPGGAVTPQTSAVNVGVPPPVN
FGGARPTSNAGSEAIGGPSSKPQAPPRPRQVLQSGGGGRSGSRAPVPRSS
VGGRNYTDNHVKQLVLIETAVVASATQQDHATYNLPRQGRTLTLTNVFKF
VALRGAGVMYGLANAKQVEAHTGRHSNFFDGKIDARIVAIIKKDINDEAI
TKSRKFSKILLSLIAEAGCTSPDCDWDHNTFTSENIARMQANMEAETGTS
ALHNVINPAAAFASSSSPGLGAAAAGSAGGPGNGVPSKRRLDLGRDDGQT
PSPRLKKLKRNARARFAGSENTPVAAAAAAATAAAANASATNSSRSPPKE
EDDMRAAEVLQGLKGIGGN*
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